Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10p14
         (320 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p pro...    28   2.3  
AE013599-1384|AAF58593.1| 1218|Drosophila melanogaster CG17509-P...    27   5.4  
AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein ...    27   7.1  
AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein ...    27   7.1  
AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-P...    27   7.1  
AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-P...    27   7.1  
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P...    27   7.1  

>BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p
           protein.
          Length = 1431

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 136 QLFSKTSNTSRVKITLYLLSMLFQKPFYRYMWS 234
           QLFS  S  S++ ITL  L   F + +Y+ ++S
Sbjct: 219 QLFSMCSTASQLIITLLALEKYFHRNYYKRLFS 251


>AE013599-1384|AAF58593.1| 1218|Drosophila melanogaster CG17509-PA
           protein.
          Length = 1218

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +2

Query: 266 MKLLIFLTYIFNSHFF 313
           +KLL  L+Y+F++HFF
Sbjct: 644 LKLLAMLSYVFSAHFF 659


>AF209068-1|AAF89163.2| 1871|Drosophila melanogaster Mud protein
            protein.
          Length = 1871

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 194  ERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 66
            E   ++    D+ E LE  C++   ER    E +   E+ C++
Sbjct: 1532 EFEVKLATLEDIIETLEMRCTQMEEERATAYEQINKLENRCQE 1574


>AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein
            protein.
          Length = 2501

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 194  ERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 66
            E   ++    D+ E LE  C++   ER    E +   E+ C++
Sbjct: 1532 EFEVKLATLEDIIETLEMRCTQMEEERATAYEQINKLENRCQE 1574


>AE014298-2023|AAN09584.1| 1871|Drosophila melanogaster CG12047-PC,
            isoform C protein.
          Length = 1871

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 194  ERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 66
            E   ++    D+ E LE  C++   ER    E +   E+ C++
Sbjct: 1532 EFEVKLATLEDIIETLEMRCTQMEEERATAYEQINKLENRCQE 1574


>AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-PA,
            isoform A protein.
          Length = 2328

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 194  ERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 66
            E   ++    D+ E LE  C++   ER    E +   E+ C++
Sbjct: 1532 EFEVKLATLEDIIETLEMRCTQMEEERATAYEQINKLENRCQE 1574


>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
            isoform B protein.
          Length = 2520

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 194  ERRYRVILTRDVFEVLENNCSEDNTERLETSEVLPDFEHHCKQ 66
            E   ++    D+ E LE  C++   ER    E +   E+ C++
Sbjct: 1532 EFEVKLATLEDIIETLEMRCTQMEEERATAYEQINKLENRCQE 1574


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,609,762
Number of Sequences: 53049
Number of extensions: 178251
Number of successful extensions: 478
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)