Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p13
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 244 6e-65
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.044
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.044
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.044
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.077
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.2
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.2
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.7
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.7
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.7
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 29 2.9
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 2.9
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.7
AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical... 28 6.7
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.8
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.8
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 244 bits (597), Expect = 6e-65
Identities = 108/179 (60%), Positives = 141/179 (78%), Gaps = 5/179 (2%)
Frame = -2
Query: 790 DGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRF 611
DG ++IN+++TWEKL+LAARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF
Sbjct: 44 DGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRF 103
Query: 610 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPC 431
+PG TNQIQ F+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI +PC
Sbjct: 104 SPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPC 163
Query: 430 NTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDPEESEKDEQQA 269
N K SIGLMWW+LARE+L LRG + R + +++ DL+FYRDP E+EK+E A
Sbjct: 164 NNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEKEETGA 222
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -1
Query: 740 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 618
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 740 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 618
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 740 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 618
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 740 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 618
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -1
Query: 740 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 618
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.077
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = -1
Query: 743 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSCIP*T 564
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSCSSCQ 96
Query: 563 SSLDCIGPCTRPS 525
S+ C CT P+
Sbjct: 97 SA--CSSACTTPT 107
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 673 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 512
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 612 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 460
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 612 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 460
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 612 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 460
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 612 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 460
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -3
Query: 693 SSHHGPSVSVLY*SLPRTPVLRLLRDVSHQVLLLTRSKLHSVNLVS*LYWTLHKTI 526
S+HH V +L S P L++ + + + + R K H +N S Y TL T+
Sbjct: 100 SAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYITLVSTV 155
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 158 CCTRCSSCFWSTPCSRRMVCP 96
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 478 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 371
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 506 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 399
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>AC084153-15|AAK84589.2| 152|Caenorhabditis elegans Hypothetical
protein Y22D7AL.15 protein.
Length = 152
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Frame = -2
Query: 706 ADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 527
A V+ +++ P A + G P+A P Q A+ +P ++ A
Sbjct: 7 AQVYPVATGPQMDSAPPPYTV-VGGAPVAVEMQPVYAAYPQQQAYGQPTVV----QAHVV 61
Query: 526 QPITEASYVNIPVIALCNTDSPLRFVDIAIPCNT----KSSHSIGLMWWLL 386
Q T+A+ + + + D P +++ C T ++ HSIG WW++
Sbjct: 62 QQPTQATVIISASVKHVDQDKP--YLEYCPRCQTSVTTRTVHSIGTCWWII 110
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 109 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 204
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 427 TKSSHSIGLMWWLLA 383
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 109 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 204
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,038
Number of Sequences: 27780
Number of extensions: 388360
Number of successful extensions: 1143
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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