Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p12
(206 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding prote... 21 1.5
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 2.0
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 2.0
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 19 4.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 19 6.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 19 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 19 6.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 19 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 19 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 19 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 19 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 19 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 19 6.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 19 6.2
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 19 6.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 19 6.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 19 6.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 19 6.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 19 6.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 19 8.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 19 8.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 19 8.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 19 8.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 8.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 19 8.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 19 8.2
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 19 8.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 19 8.2
AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding prote... 19 8.2
>AF393492-1|AAL60417.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 21.0 bits (42), Expect = 1.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 83 FGIXXFCIFQKLLF 124
FG C+FQKL F
Sbjct: 52 FGCFEACVFQKLHF 65
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 2.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 67 RLXLAFWNXXFLHLPKTSFRLV 132
+L + WN LH+ TS++ V
Sbjct: 90 KLKIYKWNNQILHILWTSYKKV 111
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 2.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 67 RLXLAFWNXXFLHLPKTSFRLV 132
+L + WN LH+ TS++ V
Sbjct: 73 KLKIYKWNNQILHILWTSYKKV 94
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 19.4 bits (38), Expect = 4.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 106 LPKTSFRLVPIMILF 150
L KT ++PIM+LF
Sbjct: 223 LKKTVCFVIPIMLLF 237
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 206 LRSRTHGFQHTS 217
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 206 LRSRTHGFQHTS 217
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 206 LRSRTHGFQHTS 217
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 19.0 bits (37), Expect = 6.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRSRTHGFQHTS 228
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 206 LRNRTHGFQHTS 217
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRNRTHGFQHTS 228
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRNRTHGFQHTS 228
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 206 LRNRTHGFQHTS 217
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRNRTHGFQHTS 228
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 206 LRNRTHGFQHTS 217
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 222 LRNRTHGFQHTS 233
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRNRTHGFQHTS 228
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 18.6 bits (36), Expect = 8.2
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +1
Query: 10 IRFEXHGMEHTS 45
+R HG +HTS
Sbjct: 217 LRNRTHGFQHTS 228
>AF393495-1|AAL60420.1| 136|Apis mellifera odorant binding protein
ASP4 protein.
Length = 136
Score = 18.6 bits (36), Expect = 8.2
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 86 GIXXFCIFQKLLF 124
G C+FQKL F
Sbjct: 53 GCFEACVFQKLHF 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,442
Number of Sequences: 438
Number of extensions: 394
Number of successful extensions: 29
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2912559
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
- SilkBase 1999-2023 -