Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10p02
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 341 3e-94
AF003137-8|AAB93645.3| 494|Caenorhabditis elegans Hypothetical ... 192 2e-49
AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical... 184 5e-47
AF003137-7|AAN84856.1| 433|Caenorhabditis elegans Hypothetical ... 181 7e-46
AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical ... 181 7e-46
AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical ... 175 3e-44
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 61 9e-10
U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical pr... 55 6e-08
U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical pr... 55 7e-08
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AL132862-32|CAJ76955.1| 135|Caenorhabditis elegans Hypothetical... 42 6e-04
U80847-3|AAB37985.1| 115|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical p... 35 0.086
AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical ... 35 0.086
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 32 0.46
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 32 0.60
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 32 0.60
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 32 0.60
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 32 0.60
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 31 1.1
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 31 1.1
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 31 1.1
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 31 1.1
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 31 1.1
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 31 1.1
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 31 1.1
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 30 1.8
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 30 2.4
AF016447-2|AAG24012.1| 339|Caenorhabditis elegans Hypothetical ... 30 2.4
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.2
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 29 3.2
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical ... 29 4.3
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 29 4.3
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 29 5.6
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 28 7.4
U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog (t... 28 7.4
AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical ... 28 7.4
U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical pr... 28 9.8
U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical pr... 28 9.8
U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 28 9.8
U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 28 9.8
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 28 9.8
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 341 bits (839), Expect = 3e-94
Identities = 142/239 (59%), Positives = 178/239 (74%)
Frame = -2
Query: 853 CESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPKCQICIEKNGGCN 674
C + C CGA +HAPT C TI+QW+TKCADDSETANYISAHTKDCP+C CIEK GGCN
Sbjct: 242 CHTSFCVKCGADYHAPTSCETIKQWMTKCADDSETANYISAHTKDCPQCHSCIEKAGGCN 301
Query: 673 HMQCGSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNLTTDSQHAQAREALKKYLHYYER 494
H+QC CRH FCW+C GDWK+HGSEYYECSRYKE+P++ ++ H +AR AL+KYLHY+ER
Sbjct: 302 HIQCTRCRHHFCWMCFGDWKSHGSEYYECSRYKENPSVAAEANHVKARRALEKYLHYFER 361
Query: 493 WENHARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXXXX 314
+ENH++SLK+EE+ + ++ +I++KV GTWIDWQYL + LL +CR
Sbjct: 362 FENHSKSLKMEEELRDKIRKKIDDKVNEHNGTWIDWQYLHKSVSLLTKCRYTLQYTYPFA 421
Query: 313 XYMEVGPRKELFEYQQAQLEAEIENLSWKIERAETTHRGDLENQMDIAEKRRTTLLKDF 137
++ PRK LFEYQQAQLE E+E L+W +ERA+ T RG LE M AE +R TLL DF
Sbjct: 422 YFLSATPRKNLFEYQQAQLEKEVEELAWAVERADGTARGALEAHMHRAEHKRQTLLHDF 480
>AF003137-8|AAB93645.3| 494|Caenorhabditis elegans Hypothetical
protein C27A12.8 protein.
Length = 494
Score = 192 bits (469), Expect = 2e-49
Identities = 89/214 (41%), Positives = 127/214 (59%), Gaps = 2/214 (0%)
Frame = -2
Query: 853 CESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPKCQICIEKNGGCN 674
C S CFSCG H P +C ++ WL KC DDSET+N+I+A+TK+CPKC I IEK+GGCN
Sbjct: 237 CGSRFCFSCGHDWHEPVNCRLLKLWLKKCNDDSETSNWINANTKECPKCMITIEKDGGCN 296
Query: 673 HMQC--GSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNLTTDSQHAQAREALKKYLHYY 500
HM C +CR +FCW+CLG W+ HGS +Y C+R+ + +R L++YL YY
Sbjct: 297 HMTCKNTACRFEFCWMCLGPWEPHGSSWYSCNRFDDSAAKNARDAQEVSRANLQRYLFYY 356
Query: 499 ERWENHARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXX 320
R+ H +SL+LE + ++KS++ E++ +WI+ Q+L A +L CR
Sbjct: 357 NRYMGHQQSLRLEGKLYATVKSKM-EQMQTLSMSWIEVQFLRKAVDVLSECRRTLMFTYA 415
Query: 319 XXXYMEVGPRKELFEYQQAQLEAEIENLSWKIER 218
Y++ +FE Q LE E E LS +ER
Sbjct: 416 FAFYLKRDNNAIIFESNQKDLEMETEQLSGFLER 449
>AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical
protein Y73F8A.34a protein.
Length = 485
Score = 184 bits (449), Expect = 5e-47
Identities = 98/234 (41%), Positives = 135/234 (57%), Gaps = 2/234 (0%)
Frame = -2
Query: 853 CESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPKCQICIEKNGGCN 674
C CF+C H P C ++ W KC+DDSET N+I+A+TK CPKC + IEKNGGCN
Sbjct: 234 CGERFCFACAQDWHDPLSCRHMKMWRKKCSDDSETLNWINANTKPCPKCSVTIEKNGGCN 293
Query: 673 HMQC--GSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNLTTDSQHAQAREALKKYLHYY 500
HM C SCR++FCW+CLGDWK H +C+RY ED N TDS+ + +R+ L++YL YY
Sbjct: 294 HMSCKSSSCRYEFCWLCLGDWKNHA----QCNRYVEDDN-KTDSR-SLSRKNLQRYLFYY 347
Query: 499 ERWENHARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXX 320
R+ H S+KLE + ++ ++ + + A +WI+ Q+L A L CR
Sbjct: 348 NRFMAHQNSMKLEGKLYAKVEVKM-DLMQALSMSWIEVQFLRRAVDALCECRRTLKYAYA 406
Query: 319 XXXYMEVGPRKELFEYQQAQLEAEIENLSWKIERAETTHRGDLENQMDIAEKRR 158
Y+E LFE Q+ LE E LS +E GDLE+ D+AE +R
Sbjct: 407 FAYYLEANNMTTLFETNQSDLELATEQLSGMLE-------GDLEDN-DLAELKR 452
>AF003137-7|AAN84856.1| 433|Caenorhabditis elegans Hypothetical
protein C27A12.7b protein.
Length = 433
Score = 181 bits (440), Expect = 7e-46
Identities = 81/214 (37%), Positives = 126/214 (58%), Gaps = 2/214 (0%)
Frame = -2
Query: 853 CESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPKCQICIEKNGGCN 674
C S CFSCG H P +C ++ W+ KC DDSET+N+I+++TK+CPKC IEKNGGCN
Sbjct: 176 CGSRFCFSCGQDWHEPVNCRLLKLWMKKCNDDSETSNWINSNTKECPKCMATIEKNGGCN 235
Query: 673 HMQCGS--CRHDFCWVCLGDWKAHGSEYYECSRYKEDPNLTTDSQHAQAREALKKYLHYY 500
+ C + C+ FCW+CLG W H + +Y+C+++ ++ + T + R L +YL YY
Sbjct: 236 QITCKNTGCKFQFCWMCLGPWTVHANAWYKCNKFDDEASQTARTAQELYRANLTRYLFYY 295
Query: 499 ERWENHARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXX 320
R+ H +SL+LE + +++K+++ +++ +WID Q+L A +L CR
Sbjct: 296 NRYMGHLQSLRLEGKLNKTVKAKM-DQMQNLSMSWIDVQFLRKAVDVLSECRNTLMFTYI 354
Query: 319 XXXYMEVGPRKELFEYQQAQLEAEIENLSWKIER 218
Y++ +FE Q LE E E LS +ER
Sbjct: 355 FAFYLKRDNNSMIFESNQKDLEMETEQLSGLLER 388
>AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical
protein C27A12.7a protein.
Length = 497
Score = 181 bits (440), Expect = 7e-46
Identities = 81/214 (37%), Positives = 126/214 (58%), Gaps = 2/214 (0%)
Frame = -2
Query: 853 CESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPKCQICIEKNGGCN 674
C S CFSCG H P +C ++ W+ KC DDSET+N+I+++TK+CPKC IEKNGGCN
Sbjct: 240 CGSRFCFSCGQDWHEPVNCRLLKLWMKKCNDDSETSNWINSNTKECPKCMATIEKNGGCN 299
Query: 673 HMQCGS--CRHDFCWVCLGDWKAHGSEYYECSRYKEDPNLTTDSQHAQAREALKKYLHYY 500
+ C + C+ FCW+CLG W H + +Y+C+++ ++ + T + R L +YL YY
Sbjct: 300 QITCKNTGCKFQFCWMCLGPWTVHANAWYKCNKFDDEASQTARTAQELYRANLTRYLFYY 359
Query: 499 ERWENHARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXX 320
R+ H +SL+LE + +++K+++ +++ +WID Q+L A +L CR
Sbjct: 360 NRYMGHLQSLRLEGKLNKTVKAKM-DQMQNLSMSWIDVQFLRKAVDVLSECRNTLMFTYI 418
Query: 319 XXXYMEVGPRKELFEYQQAQLEAEIENLSWKIER 218
Y++ +FE Q LE E E LS +ER
Sbjct: 419 FAFYLKRDNNSMIFESNQKDLEMETEQLSGLLER 452
>AF003137-5|AAB93643.1| 491|Caenorhabditis elegans Hypothetical
protein C27A12.6 protein.
Length = 491
Score = 175 bits (427), Expect = 3e-44
Identities = 93/243 (38%), Positives = 132/243 (54%), Gaps = 7/243 (2%)
Frame = -2
Query: 853 CESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPKCQICIEKNGGCN 674
C + CFSCG H P +C +++W+ KC DDSET N+I+A+TKDCPKC I IEKNGGCN
Sbjct: 235 CGTCFCFSCGQNWHEPLNCRHLKKWIKKCQDDSETMNWINANTKDCPKCMIPIEKNGGCN 294
Query: 673 HMQC--GSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNLTTDSQHAQAREALKKYLHYY 500
M C CR++FCW+CL W HG + Y C+ Y E +R LK+YL Y+
Sbjct: 295 RMLCTNSGCRYEFCWMCLEPWTKHGYQ-YACNGYDETAVKNPQDAQEISRANLKRYLFYF 353
Query: 499 ERWENHARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXX 320
R+ H +SL+LE + L ++ E++ +WI+ Q+L A +L CR
Sbjct: 354 NRYMGHEQSLQLEGK-LNIKVAKKMEQMENMSMSWIEVQFLRKAVDILSECRRTLMYTYA 412
Query: 319 XXXYMEVGPRKELFEYQQAQLEAEIENLSWKIER-----AETTHRGDLENQMDIAEKRRT 155
Y++ +FE QA LE E E LS +ER T + ++++ E+RR
Sbjct: 413 FAFYLKKDNNSIIFESNQANLEMETEQLSGFLERDLEDEDLVTLKQKVQDKYRYVEQRRK 472
Query: 154 TLL 146
LL
Sbjct: 473 VLL 475
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 62.9 bits (146), Expect = 3e-10
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = -2
Query: 766 ADDSETANYISAHTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWVCLGDWK 614
++D T I A T+ CPKC + E+NGGC H+ C SC D+C+ C +WK
Sbjct: 326 SEDDLTRTTIDATTRRCPKCHVATERNGGCAHIHCTSCGMDWCFKCKTEWK 376
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = -2
Query: 859 KGCESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANY---ISAHTKDCPKCQICIEK 689
+ C+ C C A H C + + +DS A Y + + K CPKC + +EK
Sbjct: 926 EACDRSYCRKCLAEPHPDDTCEEFAR--IRRPEDS-IARYQKDMGSRVKKCPKCAVLVEK 982
Query: 688 NGGCNHMQCGSCRHDFCWVCLGDWKAHGSEY 596
GCNHMQCG C +CW CL ++ G Y
Sbjct: 983 REGCNHMQCG-CGTHYCWTCLYVAESSGDCY 1012
>U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical
protein F56D2.5 protein.
Length = 437
Score = 55.2 bits (127), Expect = 6e-08
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -2
Query: 742 YISAHTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWVC 629
++ ++K CPKC + IEK+ GCN M C C FCW+C
Sbjct: 361 WLEENSKQCPKCLVYIEKDEGCNKMHCTKCNASFCWLC 398
>U13644-5|AAB52681.1| 451|Caenorhabditis elegans Hypothetical
protein F56D2.2 protein.
Length = 451
Score = 54.8 bits (126), Expect = 7e-08
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -2
Query: 742 YISAHTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWVC 629
++ +++K CPKC + IEKN GC+ M C C FCW+C
Sbjct: 331 WLDSNSKPCPKCSVSIEKNEGCHKMHCTKCDTYFCWLC 368
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 724 KDCPKCQICIEK--NGGCNHMQCGSCRHDFCWVCL 626
K CP+C+ I K +G CNHM C C +FCW+CL
Sbjct: 256 KACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWLCL 290
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 724 KDCPKCQICIEK--NGGCNHMQCGSCRHDFCWVCL 626
K CP+C+ I K +G CNHM C C +FCW+CL
Sbjct: 256 KACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWLCL 290
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 48.4 bits (110), Expect = 7e-06
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 724 KDCPKCQICIEK--NGGCNHMQCGSCRHDFCWVCL 626
K CP+C+ I K +G CNHM C C +FCW+CL
Sbjct: 256 KACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWLCL 290
>AL132862-32|CAJ76955.1| 135|Caenorhabditis elegans Hypothetical
protein Y73F8A.34b protein.
Length = 135
Score = 41.9 bits (94), Expect = 6e-04
Identities = 34/109 (31%), Positives = 51/109 (46%)
Frame = -2
Query: 484 HARSLKLEEQTLESLKSRINEKVMAGEGTWIDWQYLWDAAKLLKRCRXXXXXXXXXXXYM 305
H S+KLE + ++ ++ + + A +WI+ Q+L A L CR Y+
Sbjct: 3 HQNSMKLEGKLYAKVEVKM-DLMQALSMSWIEVQFLRRAVDALCECRRTLKYAYAFAYYL 61
Query: 304 EVGPRKELFEYQQAQLEAEIENLSWKIERAETTHRGDLENQMDIAEKRR 158
E LFE Q+ LE E LS +E GDLE+ D+AE +R
Sbjct: 62 EANNMTTLFETNQSDLELATEQLSGMLE-------GDLEDN-DLAELKR 102
>U80847-3|AAB37985.1| 115|Caenorhabditis elegans Hypothetical
protein C17H11.4 protein.
Length = 115
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = -2
Query: 400 TWIDWQYLWDAAKLLKRCRXXXXXXXXXXXYMEVGPRKELFEYQQAQLEAEIENLSWKIE 221
+WI+ Q+L L CR Y+E LFE Q+ LE E LS +E
Sbjct: 2 SWIEVQFLRQPVDALSECRRTLKYAYAFAYYLEANNLTTLFETNQSDLELATEQLSGMLE 61
Query: 220 RAETTHRGDLENQMDIAEKRR 158
GDLE+ MD+AE +R
Sbjct: 62 -------GDLED-MDLAELKR 74
>Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.086
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 736 SAHTKDCPKCQICIEKNGGCNHMQC--GSCRHDFCWVC 629
S+ K CP C+ GCN++ C +C FCW+C
Sbjct: 73 SSDIKRCPLCRSIYMHVVGCNYVICANSACNTAFCWLC 110
>AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 34.7 bits (76), Expect = 0.086
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 736 SAHTKDCPKCQICIEKNGGCNHMQC--GSCRHDFCWVC 629
S+ K CP C+ GCN++ C +C FCW+C
Sbjct: 73 SSDIKRCPLCRSIYMHVVGCNYVICANSACNTAFCWLC 110
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 709 CQICIEK-NGGCNHMQCGSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPN 563
C IC E + C +C ++ + C+ W S +CSR +DPN
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQCSRALKDPN 2156
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 709 CQICIEK-NGGCNHMQCGSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPN 563
C IC E + C +C ++ + C+ W S +CSR +DPN
Sbjct: 2107 CLICTEIIEEAVETVTCDTCTREYHYHCISRWLKINSVCPQCSRALKDPN 2156
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -2
Query: 292 RKELFEYQQAQLEAEIENLSWKIERAETTHRGDLENQMDIAEKRRTTLLKDFLE 131
RK + LE ++NL +IE+ + R D EN+M IAEKR +L + E
Sbjct: 192 RKAQSQENLDDLEKTVQNLKVEIEKLKH-ERFDFENRMKIAEKRVESLSSNLSE 244
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = -2
Query: 292 RKELFEYQQAQLEAEIENLSWKIERAETTHRGDLENQMDIAEKRRTTLLKDFLE 131
RK + LE ++NL +IE+ + R D EN+M IAEKR +L + E
Sbjct: 192 RKAQSQENLDDLEKTVQNLKVEIEKLKH-ERFDFENRMKIAEKRVESLSSNLSE 244
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 847 SLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKD 719
S TCF+C H T+C+ ++ C D + AN ++ +K+
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKN 243
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 847 SLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKD 719
S TCF+C H T+C+ ++ C D + AN ++ +K+
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKN 243
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 277 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 308
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 211 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 242
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 211 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 242
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 277 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 308
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 211 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 242
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQCG-SCRHDFCWVCLGDWKAHG-SEYYEC 587
KCQ+C + G C H FC C+ + +G S Y EC
Sbjct: 37 KCQVCCTNYNETTKLARGLHCGHTFCTECIKTMQKYGNSAYLEC 80
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 211 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 242
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 211 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 242
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 730 HTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWV 632
H DC CQ CI CN M C + W+
Sbjct: 211 HVSDCESCQ-CIRGVSVCNKMTCPKVNQECTWI 242
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 292 RKELFEYQQAQLEAEIENLSWKIERAETTHRGDLENQ 182
R E Q +Q +AEIENL +++ T H +L+ Q
Sbjct: 563 RTSALENQLSQKDAEIENLKRDLQQLVTKHESELKEQ 599
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQCGSCRHDFCWVCLGDWKAHGS 602
+C +C KN + C H+FC+ C+ W GS
Sbjct: 40 ECSVC--KNEIIDTTSLSDCCHEFCYDCIVGWLTKGS 74
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQCGSCRHDFCWVCLGDW 617
+C IC++ CG H FCW CL W
Sbjct: 25 ECNICLDAAKDAVVSLCG---HLFCWPCLSQW 53
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Frame = -2
Query: 754 ETANYISAHTKDCPKCQICIEK------NGGCNHMQCGSCRHDFCWVC 629
E N S T C CQ+ + C H C C+ FC +C
Sbjct: 198 EVLNGKSKDTLSCTSCQLTYSSQTFPRIHPSCGHSVCEDCKEPFCKIC 245
>AF016447-2|AAG24012.1| 339|Caenorhabditis elegans Hypothetical
protein C54F6.9 protein.
Length = 339
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 721 DCPKCQICIEKNGGCNHMQCGSCRHDFC 638
+C K C E + NH++C +CR C
Sbjct: 42 NCKKLNNCYEVSTNSNHLKCAACRFKRC 69
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = -2
Query: 763 DDSETANYISAHTKDCPKCQICIEKNGGCNHMQCGSCRHDFCWVCLG 623
DD + S CP C + G N + C C+ F W C+G
Sbjct: 295 DDDSNGSESSEEIWICPVCSVAYTV--GANMIGCDQCQDWFHWHCVG 339
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = -2
Query: 709 CQICIEKNGGCNHMQCGSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNL----TTDSQH 542
C IC +KN + GSCRH C C+ + G+ C + D ++ TTD
Sbjct: 89 CDICCKKN---DVFGIGSCRHPVCAECVIRMRILGNS-KTCPVCRSDIDILSFCTTDDDL 144
Query: 541 AQAREALKKYLH 506
A + KK H
Sbjct: 145 ANVPLSFKKTAH 156
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -2
Query: 757 SETANYISAHTKDCPKCQICIEKNGGCNH-MQCGSCRHDFCWVCLGDWKAHGSEYYECSR 581
S + + SA D +C IC++ ++C SCR F C W S C+R
Sbjct: 123 SSSISSSSAELSDA-RCLICLDDVISTEKTIKCNSCRRRFHLDCASQWFKEKSVCPACNR 181
Query: 580 YKEDP 566
DP
Sbjct: 182 GMLDP 186
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 709 CQICIEKNGGCNHMQCGSCRHDFCWVCLGDWKAHGSEYYECSRYKEDPNL 560
C IC K ++ +C H+FC+VCL A G++ C R K P+L
Sbjct: 107 CYICYYKLTIPTRIE--NCGHEFCYVCLKSNFAMGNDCPVC-RGKISPSL 153
>AC199170-5|ABO33263.1| 95|Caenorhabditis elegans Hypothetical
protein T08D2.4 protein.
Length = 95
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 715 PKCQICIEKNGGCNHM-QCGSCRHDFCWVCL 626
P C IC+E+ +H+ + C H FC +C+
Sbjct: 24 PTCSICMEEFDANSHIPKVLICGHSFCIICI 54
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQ--CGSCRHDFCWVCLGDW 617
+C IC H+ +C H FC+ CL DW
Sbjct: 33 ECSICFFDFDDFQHLPKLLENCGHTFCYSCLFDW 66
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 28.7 bits (61), Expect = 5.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQCGSCRHDFCWVCLGDW 617
+C IC+ + C H FC+ C+ +W
Sbjct: 67 QCTICLSTRFS-QECRIEGCNHSFCFSCISEW 97
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 28.3 bits (60), Expect = 7.4
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -2
Query: 859 KGCESLTCFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHT---KDCPKCQICIEK 689
KG TCF C H DC Q + D N A+T +DCP ++ +K
Sbjct: 275 KGFPYATCFVCKQVGHISRDC---HQNVNGVYPDGGCCNVCGANTHLRRDCP--ELAAQK 329
Query: 688 NGGCN 674
GG +
Sbjct: 330 AGGAH 334
>U00044-6|AAA50679.2| 670|Caenorhabditis elegans Bard homolog
(tumor suppressorgene bard1) protein 1 protein.
Length = 670
Score = 28.3 bits (60), Expect = 7.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQCGSCRHDFCWVCLGDWK 614
+C C + G ++ SC+H +CW C+ ++
Sbjct: 17 ECVKCKKPRGDLQYLG-SSCKHAYCWECIATFQ 48
>AF016659-1|AAB66047.3| 1251|Caenorhabditis elegans Hypothetical
protein F40E12.2 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -2
Query: 583 RYKED-PNLTTDSQHA--QAREALKKYLHYYERWENHARSLKLEEQTLESLKSRINEKVM 413
++K+D N+ T+++ A ++R +LK Y+E +SLK E +ES+ + K
Sbjct: 403 KFKDDLNNMRTEAEFATWKSRGSLKAMKEYFEGHRKLFKSLKQETSFIESVNVLLRSKQK 462
Query: 412 AGE-GTWI 392
E +W+
Sbjct: 463 ITEISSWM 470
>U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical
protein F47C10.8 protein.
Length = 402
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 727 TKDCPKCQICIEKNGGCNHMQCGSCRHDFC 638
T C K +C+E N G +QC +CR + C
Sbjct: 102 TYHCKKWNMCLE-NSGQPILQCKACRFEKC 130
>U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical
protein F26F12.3c protein.
Length = 648
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = -2
Query: 838 CFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPK----CQICIEKNGGCNH 671
C C H P C+ W+ K + E ++ T+ + C +E +
Sbjct: 417 CPKCEREPHFPMTCSAFATWIGKWEKEYEL--HVLEKTEYLKRIQCACGYTMEVRDQASR 474
Query: 670 MQCGSCRHDFC 638
+CG C FC
Sbjct: 475 AECGGCGRVFC 485
>U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = -2
Query: 838 CFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPK----CQICIEKNGGCNH 671
C C H P C+ W+ K + E ++ T+ + C +E +
Sbjct: 574 CPKCEREPHFPMTCSAFATWIGKWEKEYEL--HVLEKTEYLKRIQCACGYTMEVRDQASR 631
Query: 670 MQCGSCRHDFC 638
+CG C FC
Sbjct: 632 AECGGCGRVFC 642
>U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = -2
Query: 838 CFSCGAPHHAPTDCATIRQWLTKCADDSETANYISAHTKDCPK----CQICIEKNGGCNH 671
C C H P C+ W+ K + E ++ T+ + C +E +
Sbjct: 659 CPKCEREPHFPMTCSAFATWIGKWEKEYEL--HVLEKTEYLKRIQCACGYTMEVRDQASR 716
Query: 670 MQCGSCRHDFC 638
+CG C FC
Sbjct: 717 AECGGCGRVFC 727
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 712 KCQICIEKNGGCNHMQCGSCRHDFCWVCL 626
+C IC+E N + + CG H FCW C+
Sbjct: 254 QCSICLE-NKNPSALFCG---HLFCWTCI 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,392,226
Number of Sequences: 27780
Number of extensions: 423254
Number of successful extensions: 1541
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1515
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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