Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10p01
         (234 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    26   0.15 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   2.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    21   4.4  

>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.15
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = +2

Query: 23  PFNLKILAFHRRFPVKRFFEVRKVMCPYISDGANVVALTNPRSHIKTLAEIEVPTRFGKN 202
           PF+ +I A +    ++R   VR  + P ++D   V+   + R H+  L +  V  R G+N
Sbjct: 485 PFSYRIQATNNGGSMRRG-TVRLFLGPKVNDRGQVLPFRDQRRHMVELDKFTVNLRPGQN 543


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -3

Query: 211 KSFIFAKTSRYLYFCECLNVGPRVRKCNNIG 119
           K   F +   Y   C C  VG R  +CN  G
Sbjct: 383 KENFFMREDGYCINCGCDPVGSRSLQCNAEG 413


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 103 LHFRRRQCCCTYEPEVPH 156
           LHFR + CC    P  PH
Sbjct: 37  LHFRDQVCCVQRSP--PH 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,331
Number of Sequences: 2352
Number of extensions: 4248
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)