Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10o22
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 130 2e-30
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 98 6e-21
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 98 6e-21
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 78 9e-15
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 78 9e-15
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 78 9e-15
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 72 4e-13
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 72 4e-13
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 69 3e-12
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 69 3e-12
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 58 1e-08
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 58 1e-08
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 58 1e-08
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 58 1e-08
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 58 1e-08
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 58 1e-08
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 57 1e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 55 5e-08
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 54 9e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 52 4e-07
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 52 4e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 52 4e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 2e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 46 3e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 8e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 1e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 44 1e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 40 0.003
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 39 0.004
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.005
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 39 0.005
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 38 0.007
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 38 0.007
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 38 0.011
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.011
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 38 0.011
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.011
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 38 0.011
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 37 0.015
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.020
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.035
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 36 0.035
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 36 0.035
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.035
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.035
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.046
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 35 0.061
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.061
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.061
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 35 0.061
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 35 0.061
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.081
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.081
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 34 0.11
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.11
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.11
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 34 0.14
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.33
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.33
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.33
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.33
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.33
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.33
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 32 0.43
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.57
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 32 0.57
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.57
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.57
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.57
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 1.00
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 30 1.7
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 30 2.3
AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of el... 29 3.0
AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of el... 29 3.0
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.3
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 29 5.3
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 7.0
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 7.0
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 28 7.0
AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical... 28 7.0
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 130 bits (313), Expect = 2e-30
Identities = 68/179 (37%), Positives = 105/179 (58%), Gaps = 10/179 (5%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG- 472
DLIVLG+ +KTT+E + YF G ++ ++KR + G SKGFGF++ + Q + L
Sbjct: 174 DLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKS-DGNSKGFGFVRMSSVGEQNKVLAI 232
Query: 471 RRHMIDGRWCDVRIPNGKDGSS-TAHRKVFVGRCTENITAEDLREYFGSFGQ-------V 316
+HMIDGR CDV++P+G+D + ++FVGR T+ + LR+ FG + V
Sbjct: 233 PQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVV 292
Query: 315 TDVFVPRPFRAFSFVTFLDPEVARSLCGQDHI-IKGVSVNISTASPKRERSTTAASGLG 142
TDVF+P+PFR F+FVT E A + + + + G+SV +S A P+ E + + G
Sbjct: 293 TDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREENNQSVGPDYG 351
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 98.3 bits (234), Expect = 6e-21
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 10/166 (6%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GR 469
+ + GL W+TT E +RDYF FG++ V RD T ++GFGFI F + + + L R
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 468 RHMIDGRWCDVRIPNGKDGSS---TAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFV- 301
H +DG+ D ++ K + T +KVF+G + T ED+++YF ++G+V D +
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLM 166
Query: 300 ----PRPFRAFSFVTFLDPEVARSLCG-QDHIIKGVSVNISTASPK 178
+ R F FVTF EVA +C H I G V A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 58.4 bits (135), Expect = 6e-09
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = -2
Query: 426 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFL 262
+G GS K+F+G + TAE+LR+YFG FG+V + V R R F F+TF+
Sbjct: 36 DGSHGSQDPG-KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFV 94
Query: 261 DP-EVARSLCGQDHIIKGVSVNISTASPKRERS 166
DP V + L ++H + G ++ A PKR ++
Sbjct: 95 DPSSVDKVLNNREHELDGKKIDPKVAFPKRTQA 127
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -2
Query: 693 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGF 514
AFP+ + + + GL +T E ++ YF ++G + + D T +GFGF
Sbjct: 120 AFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGF 179
Query: 513 IKFAEYEAQLRALG-RRHMIDGRWCDVRIPNGKD 415
+ F E + H I+G+ + + K+
Sbjct: 180 VTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 213
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 98.3 bits (234), Expect = 6e-21
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 10/166 (6%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GR 469
+ + GL W+TT E +RDYF FG++ V RD T ++GFGFI F + + + L R
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 468 RHMIDGRWCDVRIPNGKDGSS---TAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFV- 301
H +DG+ D ++ K + T +KVF+G + T ED+++YF ++G+V D +
Sbjct: 107 EHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLM 166
Query: 300 ----PRPFRAFSFVTFLDPEVARSLCG-QDHIIKGVSVNISTASPK 178
+ R F FVTF EVA +C H I G V A PK
Sbjct: 167 FDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 58.4 bits (135), Expect = 6e-09
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = -2
Query: 426 NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFL 262
+G GS K+F+G + TAE+LR+YFG FG+V + V R R F F+TF+
Sbjct: 36 DGSHGSQDPG-KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFV 94
Query: 261 DP-EVARSLCGQDHIIKGVSVNISTASPKRERS 166
DP V + L ++H + G ++ A PKR ++
Sbjct: 95 DPSSVDKVLNNREHELDGKKIDPKVAFPKRTQA 127
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -2
Query: 693 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGF 514
AFP+ + + + GL +T E ++ YF ++G + + D T +GFGF
Sbjct: 120 AFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGF 179
Query: 513 IKFAEYEAQLRALG-RRHMIDGRWCDVRIPNGKD 415
+ F E + H I+G+ + + K+
Sbjct: 180 VTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 213
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 77.8 bits (183), Expect = 9e-15
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGR 469
+ V GL TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 468 RHMIDGRWCDVR--IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT--- 313
H+IDG+ D + +P + S+ + ++++V E+ T + L EYF +G VT
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 312 ---DVFVPRPFRAFSFVTFLDPE-VARSLCGQDHIIKGVSVNISTASPKRERS 166
D +P R F FVTF D + V + + + H++ G ++ K E S
Sbjct: 145 IILDKATQKP-RGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 196
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Frame = -2
Query: 441 DVRIPNGKDGSSTAH---RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FR 286
+++ NG +S RK+FVG T N T + +RE++ FG++TD+ V R R
Sbjct: 5 EIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSR 64
Query: 285 AFSFVTFL-DPEVARSLCGQDHIIKGVSVNISTASPKRERSTTAAS 151
F FVTF EV ++ + HII G +V+ A P+ +++ + ++
Sbjct: 65 GFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESN 110
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA-LGR 469
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ + L +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 468 RHMIDGRWCDVRIPNGKDGSSTA 400
HM++G CDVR KD S A
Sbjct: 176 SHMVNGHRCDVRKGLSKDEMSKA 198
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 77.8 bits (183), Expect = 9e-15
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGR 469
+ V GL TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 468 RHMIDGRWCDVR--IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT--- 313
H+IDG+ D + +P + S+ + ++++V E+ T + L EYF +G VT
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 312 ---DVFVPRPFRAFSFVTFLDPE-VARSLCGQDHIIKGVSVNISTASPKRERS 166
D +P R F FVTF D + V + + + H++ G ++ K E S
Sbjct: 145 IILDKATQKP-RGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 196
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Frame = -2
Query: 441 DVRIPNGKDGSSTAH---RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FR 286
+++ NG +S RK+FVG T N T + +RE++ FG++TD+ V R R
Sbjct: 5 EIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSR 64
Query: 285 AFSFVTFL-DPEVARSLCGQDHIIKGVSVNISTASPKRERSTTAAS 151
F FVTF EV ++ + HII G +V+ A P+ +++ + ++
Sbjct: 65 GFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESN 110
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA-LGR 469
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ + L +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 468 RHMIDGRWCDVRIPNGKDGSSTA 400
HM++G CDVR KD S A
Sbjct: 176 SHMVNGHRCDVRKGLSKDEMSKA 198
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 77.8 bits (183), Expect = 9e-15
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGR 469
+ V GL TT++ +R+++S FG++ + V RD T S+GFGF+ F+ + E R
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 468 RHMIDGRWCDVR--IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT--- 313
H+IDG+ D + +P + S+ + ++++V E+ T + L EYF +G VT
Sbjct: 85 PHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 312 ---DVFVPRPFRAFSFVTFLDPE-VARSLCGQDHIIKGVSVNISTASPKRERS 166
D +P R F FVTF D + V + + + H++ G ++ K E S
Sbjct: 145 IILDKATQKP-RGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 196
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Frame = -2
Query: 441 DVRIPNGKDGSSTAH---RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FR 286
+++ NG +S RK+FVG T N T + +RE++ FG++TD+ V R R
Sbjct: 5 EIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSR 64
Query: 285 AFSFVTFL-DPEVARSLCGQDHIIKGVSVNISTASPKRERSTTAAS 151
F FVTF EV ++ + HII G +V+ A P+ +++ + ++
Sbjct: 65 GFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESN 110
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA-LGR 469
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ + L +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Query: 468 RHMIDGRWCDVRIPNGKDGSSTA 400
HM++G CDVR KD S A
Sbjct: 176 SHMVNGHRCDVRKGLSKDEMSKA 198
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 72.1 bits (169), Expect = 4e-13
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE-AQLRALGR 469
+ V G+ + E + +F+ +G++ QVK D G S+GF F++F E +L R
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 468 RHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVP--- 298
I G+ +V K S ++KVFVG + + +DLR +F FG+V D+ P
Sbjct: 91 EQTIKGKSVEV-----KPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDK 145
Query: 297 --RPFRAFSFVTFLDPEVARSLCGQDHIIKGV-SVNISTASPKRERSTTAASGLGWGR 133
+ R F+F+ F + E A Q G ++ A P+ +R A + GR
Sbjct: 146 QTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGRMPGGR 203
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -2
Query: 459 IDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP---- 292
I+G + NG +K+FVG + + EDL +F +G+V V
Sbjct: 8 INGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNG 67
Query: 291 -FRAFSFVTFLDPEVAR-SLCGQDHIIKGVSVNISTASPKRERSTTAASGL 145
R F+FV F E + +L ++ IKG SV + A RE GL
Sbjct: 68 RSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAK-SRENKKVFVGGL 117
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 72.1 bits (169), Expect = 4e-13
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE-AQLRALGR 469
+ V G+ + E + +F+ +G++ QVK D G S+GF F++F E +L R
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 468 RHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVP--- 298
I G+ +V K S ++KVFVG + + +DLR +F FG+V D+ P
Sbjct: 91 EQTIKGKSVEV-----KPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDK 145
Query: 297 --RPFRAFSFVTFLDPEVARSLCGQDHIIKGV-SVNISTASPKRERSTTAASGLGWGR 133
+ R F+F+ F + E A Q G ++ A P+ +R A + GR
Sbjct: 146 QTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRFPGAQGRMPGGR 203
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -2
Query: 459 IDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP---- 292
I+G + NG +K+FVG + + EDL +F +G+V V
Sbjct: 8 INGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNG 67
Query: 291 -FRAFSFVTFLDPEVAR-SLCGQDHIIKGVSVNISTASPKRERSTTAASGL 145
R F+FV F E + +L ++ IKG SV + A RE GL
Sbjct: 68 RSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAK-SRENKKVFVGGL 117
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 69.3 bits (162), Expect = 3e-12
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Frame = -2
Query: 603 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWCDVR-- 433
+R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+ D +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 432 IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT------DVFVPRPFRAF 280
+P + S+ + ++++V E+ T + L EYF +G VT D +P R F
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKP-RGF 119
Query: 279 SFVTFLDPE-VARSLCGQDHIIKGVSVNISTASPKRERS 166
FVTF D + V + + + H++ G ++ K E S
Sbjct: 120 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 158
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 469
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 468 RHMIDGRWCDVRIPNGKDGSSTA 400
HM++G CDVR KD S A
Sbjct: 138 SHMVNGHRCDVRKGLSKDEMSKA 160
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 69.3 bits (162), Expect = 3e-12
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Frame = -2
Query: 603 VRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA-EYEAQLRALGRRHMIDGRWCDVR-- 433
+R+++S FG++ + V RD T S+GFGF+ F+ + E R H+IDG+ D +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 432 IP---NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT------DVFVPRPFRAF 280
+P + S+ + ++++V E+ T + L EYF +G VT D +P R F
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKP-RGF 119
Query: 279 SFVTFLDPE-VARSLCGQDHIIKGVSVNISTASPKRERS 166
FVTF D + V + + + H++ G ++ K E S
Sbjct: 120 GFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMS 158
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA-QLRALGR 469
L V G+ TE+ + +YF+ +G + ++ D T +GFGF+ F ++++ L +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 137
Query: 468 RHMIDGRWCDVRIPNGKDGSSTA 400
HM++G CDVR KD S A
Sbjct: 138 SHMVNGHRCDVRKGLSKDEMSKA 160
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 57.6 bits (133), Expect = 1e-08
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR----PFRAFSFVTFLDPEVA 247
FG + D V R R +FVTF + A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 481
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 496 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 555
Query: 480 AL 475
A+
Sbjct: 556 AI 557
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 57.6 bits (133), Expect = 1e-08
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR----PFRAFSFVTFLDPEVA 247
FG + D V R R +FVTF + A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 481
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 496 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 555
Query: 480 AL 475
A+
Sbjct: 556 AI 557
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 57.6 bits (133), Expect = 1e-08
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR----PFRAFSFVTFLDPEVA 247
FG + D V R R +FVTF + A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 481
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 425 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 484
Query: 480 AL 475
A+
Sbjct: 485 AI 486
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 57.6 bits (133), Expect = 1e-08
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR----PFRAFSFVTFLDPEVA 247
FG + D V R R +FVTF + A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 57.6 bits (133), Expect = 1e-08
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR----PFRAFSFVTFLDPEVA 247
FG + D V R R +FVTF + A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 57.6 bits (133), Expect = 1e-08
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 10/153 (6%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR----PFRAFSFVTFLDPEVA 247
FG + D V R R +FVTF + A
Sbjct: 163 AKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 481
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 496 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 555
Query: 480 AL 475
A+
Sbjct: 556 AI 557
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 57.2 bits (132), Expect = 1e-08
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQL 484
P+ L + GL TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+
Sbjct: 46 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 105
Query: 483 RALGRRHMIDGRWCDVR--IPNGKDGS----------STAHRKVFVGRCTENI-TAEDLR 343
R H + G+ D + IP + S K+ + T + + + LR
Sbjct: 106 AMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLR 165
Query: 342 EYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA-RSLCGQD--HII--KGVSVNISTASP 181
YF +FG + V + R FV + D E A R L HI+ + + V + T P
Sbjct: 166 VYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 224
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = -2
Query: 396 RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFLDPEVARS-LC 235
RK+F+G + + T E L YF +G V D V R R F FVTF A S +
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 234 GQDHIIKGVSVNISTASPKRERST 163
+ H + G +V+ A P+ + S+
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSS 132
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 57.2 bits (132), Expect = 1e-08
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQL 484
P+ L + GL TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+
Sbjct: 66 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 125
Query: 483 RALGRRHMIDGRWCDVR--IPNGKDGS----------STAHRKVFVGRCTENI-TAEDLR 343
R H + G+ D + IP + S K+ + T + + + LR
Sbjct: 126 AMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLR 185
Query: 342 EYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA-RSLCGQD--HII--KGVSVNISTASP 181
YF +FG + V + R FV + D E A R L HI+ + + V + T P
Sbjct: 186 VYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 244
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = -2
Query: 396 RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFLDPEVARS-LC 235
RK+F+G + + T E L YF +G V D V R R F FVTF A S +
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 234 GQDHIIKGVSVNISTASPKRERST 163
+ H + G +V+ A P+ + S+
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSS 152
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 57.2 bits (132), Expect = 1e-08
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE-YEAQL 484
P+ L + GL TT+E + +YFS +G ++ V RD T S+GFGF+ FA + A+
Sbjct: 67 PQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAES 126
Query: 483 RALGRRHMIDGRWCDVR--IPNGKDGS----------STAHRKVFVGRCTENI-TAEDLR 343
R H + G+ D + IP + S K+ + T + + + LR
Sbjct: 127 AMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLR 186
Query: 342 EYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA-RSLCGQD--HII--KGVSVNISTASP 181
YF +FG + V + R FV + D E A R L HI+ + + V + T P
Sbjct: 187 VYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 245
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = -2
Query: 396 RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP-----FRAFSFVTFLDPEVARS-LC 235
RK+F+G + + T E L YF +G V D V R R F FVTF A S +
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 234 GQDHIIKGVSVNISTASPKRERST 163
+ H + G +V+ A P+ + S+
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSS 153
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 55.2 bits (127), Expect = 5e-08
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Frame = -2
Query: 675 SPPPRPRCSDLIVL---GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
SP P +D I + +P + E R F +G + + RD T SKG F+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 504 AEYEAQLRALGRRH---MIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYF 334
+ + A G H +I+G V++ D + RK+F+G+ ++ E+LRE F
Sbjct: 104 YHRKDAIEAQGALHNIKVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLREIF 162
Query: 333 GSFGQVTDVFVPR 295
FG + D V R
Sbjct: 163 AKFGHIEDCSVLR 175
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 54.4 bits (125), Expect = 9e-08
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Frame = -2
Query: 735 SPPAEGWPAYRYWCAFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV 556
SP + + + +C+ P + + ++LI+ LP T+E VR F+S G++ ++
Sbjct: 17 SPVQTTYTSTQRYCSAPNVDIGESK---TNLIINYLPQGMTQEEVRSLFTSIGEIESCKL 73
Query: 555 KRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAH-RKVFVG 379
RD TG S G+GF+ + E LRA+ + + + +++ + + ++V
Sbjct: 74 VRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKGSNLYVS 133
Query: 378 RCTENITAEDLREYFGSFGQV 316
+++T +L F FGQ+
Sbjct: 134 GIPKSMTLHELESIFRPFGQI 154
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = -2
Query: 651 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
S+L V G+P T + F FG ++ ++ D TGLSKG GF++F
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
Score = 31.5 bits (68), Expect = 0.75
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -2
Query: 681 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA 502
A PP L V L T + + FS FG ++ V++ RD T KG+ F+ +
Sbjct: 364 ATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMS 422
Query: 501 EYEAQLRAL 475
Y A+
Sbjct: 423 NYTEAYNAM 431
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 52.4 bits (120), Expect = 4e-07
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Frame = -2
Query: 663 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 484
R ++ + L +++ D FS FG++L +V D G SKG+GF+ F EA
Sbjct: 116 RSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQ 174
Query: 483 RALGRRH--MIDGRWCDV-----RIPNGKDGSSTAHR--KVFVGRCTENITAEDLREYFG 331
A+ + + ++ G+ V R ++ TA + V+V ++ E L + F
Sbjct: 175 NAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFA 234
Query: 330 SFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG--VSVNISTASPKRE 172
FG +T + V + F FV F +PE A + D I+G + +++ A K E
Sbjct: 235 KFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSE 294
Query: 171 R 169
R
Sbjct: 295 R 295
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 374
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 52.4 bits (120), Expect = 4e-07
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Frame = -2
Query: 663 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 484
R ++ + L +++ D FS FG++L +V D G SKG+GF+ F EA
Sbjct: 53 RSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQ 111
Query: 483 RALGRRH--MIDGRWCDV-----RIPNGKDGSSTAHR--KVFVGRCTENITAEDLREYFG 331
A+ + + ++ G+ V R ++ TA + V+V ++ E L + F
Sbjct: 112 NAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFA 171
Query: 330 SFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG--VSVNISTASPKRE 172
FG +T + V + F FV F +PE A + D I+G + +++ A K E
Sbjct: 172 KFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSE 231
Query: 171 R 169
R
Sbjct: 232 R 232
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 311
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 52.4 bits (120), Expect = 4e-07
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 16/181 (8%)
Frame = -2
Query: 663 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 484
R ++ + L +++ D FS FG++L +V D G SKG+GF+ F EA
Sbjct: 116 RSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQ 174
Query: 483 RALGRRH--MIDGRWCDV-----RIPNGKDGSSTAHR--KVFVGRCTENITAEDLREYFG 331
A+ + + ++ G+ V R ++ TA + V+V ++ E L + F
Sbjct: 175 NAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFA 234
Query: 330 SFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QDHIIKG--VSVNISTASPKRE 172
FG +T + V + F FV F +PE A + D I+G + +++ A K E
Sbjct: 235 KFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSE 294
Query: 171 R 169
R
Sbjct: 295 R 295
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 374
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 50.8 bits (116), Expect = 1e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Frame = -2
Query: 699 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 523
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 5 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 64
Query: 522 FGFIKFAEYEAQLRA--------LGRRHMIDGRWCDVRIPNGKDGSSTAHRK-------- 391
+GF+ + + E RA LGRR I W R P ++ S + K
Sbjct: 65 YGFVSYPKREEAERAIEQMNGQWLGRR-TIRTNWA-TRKPGDQEKPSHYNEKSYDEIYNQ 122
Query: 390 -------VFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA 247
V+VG ++T +++R+ F SFG++T+V + + + ++FV F + + A
Sbjct: 123 TSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFK-MQGYAFVKFDNKDAA 175
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 436
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 139 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 192
Query: 435 RIPNGKDGSS 406
R GK G +
Sbjct: 193 RCSWGKTGDT 202
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 50.8 bits (116), Expect = 1e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Frame = -2
Query: 699 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 523
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 15 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 74
Query: 522 FGFIKFAEYEAQLRA--------LGRRHMIDGRWCDVRIPNGKDGSSTAHRK-------- 391
+GF+ + + E RA LGRR I W R P ++ S + K
Sbjct: 75 YGFVSYPKREEAERAIEQMNGQWLGRR-TIRTNWA-TRKPGDQEKPSHYNEKSYDEIYNQ 132
Query: 390 -------VFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA 247
V+VG ++T +++R+ F SFG++T+V + + + ++FV F + + A
Sbjct: 133 TSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFK-MQGYAFVKFDNKDAA 185
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 436
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 149 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 202
Query: 435 RIPNGKDGSS 406
R GK G +
Sbjct: 203 RCSWGKTGDT 212
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 50.8 bits (116), Expect = 1e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Frame = -2
Query: 699 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 523
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 118 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 177
Query: 522 FGFIKFAEYEAQLRA--------LGRRHMIDGRWCDVRIPNGKDGSSTAHRK-------- 391
+GF+ + + E RA LGRR I W R P ++ S + K
Sbjct: 178 YGFVSYPKREEAERAIEQMNGQWLGRR-TIRTNWA-TRKPGDQEKPSHYNEKSYDEIYNQ 235
Query: 390 -------VFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA 247
V+VG ++T +++R+ F SFG++T+V + + + ++FV F + + A
Sbjct: 236 TSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFK-MQGYAFVKFDNKDAA 288
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 436
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 252 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 305
Query: 435 RIPNGKDGSS 406
R GK G +
Sbjct: 306 RCSWGKTGDT 315
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 50.8 bits (116), Expect = 1e-06
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 24/175 (13%)
Frame = -2
Query: 699 WCAFP-RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKG 523
W P + +S R + V L + + +R+ F FGD+ +V RDT T SKG
Sbjct: 86 WAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKG 145
Query: 522 FGFIKFAEYEAQLRA--------LGRRHMIDGRWCDVRIPNGKDGSSTAHRK-------- 391
+GF+ + + E RA LGRR I W R P ++ S + K
Sbjct: 146 YGFVSYPKREEAERAIEQMNGQWLGRR-TIRTNWA-TRKPGDQEKPSHYNEKSYDEIYNQ 203
Query: 390 -------VFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVA 247
V+VG ++T +++R+ F SFG++T+V + + + ++FV F + + A
Sbjct: 204 TSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIFK-MQGYAFVKFDNKDAA 256
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 436
TE+ +R F+SFG + V++ + +G+ F+KF +A +A+ + + D V
Sbjct: 220 TEDEIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLV 273
Query: 435 RIPNGKDGSS 406
R GK G +
Sbjct: 274 RCSWGKTGDT 283
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.4 bits (115), Expect = 2e-06
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Frame = -2
Query: 609 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF-AEYEAQLRA-------LGRRHMID 454
++V D FS FG++L +V D G SKG+GF+ F E+ AQ L + +
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Query: 453 GRWCDVRIPNGKD--GSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFV-----PR 295
G++ R K+ S + VFV E++ E L F FG++T V +
Sbjct: 218 GKF-QPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK 276
Query: 294 PFRAFSFVTFLDPEVARSLCGQ--DHIIKGVSVNIST--ASPKRERS 166
P + F FV F D + A + D I++G +S A K ERS
Sbjct: 277 P-KGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERS 322
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+L V + ++ +RD+FSSFG + +V D G SKGFGF+ F + E A+
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAV 400
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.4 bits (115), Expect = 2e-06
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Frame = -2
Query: 609 EAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF-AEYEAQLRA-------LGRRHMID 454
++V D FS FG++L +V D G SKG+GF+ F E+ AQ L + +
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
Query: 453 GRWCDVRIPNGKD--GSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFV-----PR 295
G++ R K+ S + VFV E++ E L F FG++T V +
Sbjct: 218 GKF-QPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK 276
Query: 294 PFRAFSFVTFLDPEVARSLCGQ--DHIIKGVSVNIST--ASPKRERS 166
P + F FV F D + A + D I++G +S A K ERS
Sbjct: 277 P-KGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERS 322
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+L V + ++ +RD+FSSFG + +V D G SKGFGF+ F + E A+
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAV 400
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = -2
Query: 627 PWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
P++TTEE + ++FSS G + V++ D TG +GF FI+FAE + RA+
Sbjct: 13 PFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -2
Query: 390 VFVGRCTENITAEDLREYFGSFGQVTDVFV------PRPFRAFSFVTFLD 259
V+VG T E+L +F S GQ+ +V + RP R F+F+ F +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRP-RGFAFIEFAE 55
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = -2
Query: 627 PWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 454
P++TTE+ + +YFS G++ V++ D TG +GF F++F E A RA+ + + +D
Sbjct: 12 PFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNGVD 69
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Frame = -2
Query: 390 VFVGRCTENITAEDLREYFGSFGQVTDVFV------PRPFRAFSFVTFLDPEVARSLCGQ 229
V+VG T +DL YF G V++V + RP R F+FV F + A+ Q
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRP-RGFAFVEFTEEAAAQRAVDQ 64
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL-GR 469
+ V GLP+ T+++ + +YF FGD+ V D T S+G+GF+ + + RA
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 468 RHMIDGRWCDVRI 430
+IDGR +V +
Sbjct: 97 NPIIDGRKANVNL 109
Score = 35.9 bits (79), Expect = 0.035
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = -2
Query: 405 TAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFV-----PRPFRAFSFVTFLDPEVARS 241
T K+FVG + + + L EYF FG + + V + R + FVT D A
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 240 LCGQDH-IIKGVSVNISTA 187
C + II G N++ A
Sbjct: 92 ACKDPNPIIDGRKANVNLA 110
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -2
Query: 651 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMV-QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+++ V L + E+ + D FS+FG +L V ++ RD +G SKGF FI FA +EA AL
Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159
Score = 41.5 bits (93), Expect = 7e-04
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 13/209 (6%)
Frame = -2
Query: 663 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 484
R + + + V GL K +E + + G ++ V + +D T +GFGF++F E
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 483 RALGRRHMID--GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTD 310
A+ +MI G+ V + + + +FVG + + L + F +FG +
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 309 V-FVPRPF-----RAFSFVTFLDPEVA----RSLCGQDHIIKGVSVNIS-TASPKRERST 163
V + R + F+F+ F E + ++ GQ + ++V+ + K ER
Sbjct: 129 VPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHG 188
Query: 162 TAASGLGWGRMLGWPADAWPLPAPHPLES 76
TAA RML +P PH + S
Sbjct: 189 TAAE-----RMLAAQNPLFPKDRPHQVFS 212
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -2
Query: 651 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMV-QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+++ V L + E+ + D FS+FG +L V ++ RD +G SKGF FI FA +EA AL
Sbjct: 110 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 169
Score = 41.5 bits (93), Expect = 7e-04
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 13/209 (6%)
Frame = -2
Query: 663 RPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQL 484
R + + + V GL K +E + + G ++ V + +D T +GFGF++F E
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 483 RALGRRHMID--GRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTD 310
A+ +MI G+ V + + + +FVG + + L + F +FG +
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 309 V-FVPRPF-----RAFSFVTFLDPEVA----RSLCGQDHIIKGVSVNIS-TASPKRERST 163
V + R + F+F+ F E + ++ GQ + ++V+ + K ER
Sbjct: 139 VPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHG 198
Query: 162 TAASGLGWGRMLGWPADAWPLPAPHPLES 76
TAA RML +P PH + S
Sbjct: 199 TAAE-----RMLAAQNPLFPKDRPHQVFS 222
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -2
Query: 639 VLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
V LP + E+ +RD F G ++ + + RD TGL KGF F+ F + RA+
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAI 234
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = -2
Query: 429 PNGK--DGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPF-----RAFSFV 271
P+G+ D + + V + + ++LR+ FG G+V +F+ R + F+FV
Sbjct: 163 PDGRQIDRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFV 222
Query: 270 TF 265
TF
Sbjct: 223 TF 224
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 651 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG 472
+ L + L ++TT +R F +GD+ V + RD + SKGFGF++F E AL
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 471 RR--HMIDGR 448
R ++DGR
Sbjct: 79 RTDGKLVDGR 88
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Frame = -2
Query: 360 TAEDLREYFGSFGQVTDVFVP-----RPFRAFSFVTFLDPEVARSLCGQ--DHIIKGVSV 202
T DLR F +G + DV +P R + F FV F + A + ++ G +
Sbjct: 31 TPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGREL 90
Query: 201 NISTASPKRERSTTAASGLGWGR 133
++ A R G G GR
Sbjct: 91 RVTLAKYDRPSDERGGRGGGGGR 113
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = -2
Query: 651 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALG 472
+ L + L ++TT +R F +GD+ V + RD + SKGFGF++F E AL
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 471 RR--HMIDGR 448
R ++DGR
Sbjct: 79 RTDGKLVDGR 88
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Frame = -2
Query: 360 TAEDLREYFGSFGQVTDVFVP-----RPFRAFSFVTFLDPEVARSLCGQ--DHIIKGVSV 202
T DLR F +G + DV +P R + F FV F + A + ++ G +
Sbjct: 31 TPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGREL 90
Query: 201 NISTASPKRERSTTAASGLGWGR 133
++ A R G G GR
Sbjct: 91 RVTLAKYDRPSDERGGRGGGGGR 113
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Frame = -2
Query: 672 PPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 493
P P L V +P E+ +R F FG + + +D TG+ KG F+ + +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 492 AQLRALGRRH---MIDGRWCDVRIPNGKDGSSTA-------HRKVFVGRCTENITAEDLR 343
+ +R H + G +++ S A +K+F+G ++ + +++R
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
Query: 342 EYFGSFGQVTDVFVPR 295
F +FG++ +V V R
Sbjct: 142 ALFATFGELDEVTVLR 157
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.0 bits (99), Expect = 1e-04
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDV 436
+ E ++ F+ FG++ +V RD +T SKG+GF+ F + A+ ++G+W
Sbjct: 147 SNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG---MNGKWIGK 203
Query: 435 RI--------PNGKDG----------SSTA--HRKVFVGRCTENITAEDLREYFGSFGQV 316
R N ++ +ST + V+VG ++ T DLR+ F ++G +
Sbjct: 204 RAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYGDI 263
Query: 315 TDVFVPRPFRAFSFVTFLDPEVA 247
+V + + R ++FV + E A
Sbjct: 264 AEVRIFKTQR-YAFVRYEKKECA 285
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = -2
Query: 408 STAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPF-----RAFSFVTFLDPEVAR 244
++ H VFVG +++++ E L+ F FG+V++ V R + + FV+F + + A
Sbjct: 131 TSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAE 190
Query: 243 S 241
+
Sbjct: 191 N 191
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -2
Query: 621 KTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+TT+ +RD FS++GD+ V++ + R + F+++ + E +A+
Sbjct: 247 QTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECATKAI 289
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Frame = -2
Query: 672 PPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 493
P P L V +P E+ +R F FG + + +D TG+ KG F+ + +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 492 AQLRALGRRH---MIDGRWCDVRIPNGKDGSSTA-------HRKVFVGRCTENITAEDLR 343
+ +R H + G +++ S A +K+F+G ++ + +++R
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVR 141
Query: 342 EYFGSFGQVTDVFVPR 295
F +FG++ +V V R
Sbjct: 142 ALFATFGELDEVTVLR 157
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/52 (34%), Positives = 33/52 (63%)
Frame = -2
Query: 630 LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+P++ TEE + +YF++ G + V++ D TG +GF F++F+E RA+
Sbjct: 13 VPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 624 WKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGR 448
W T + + YF +G + V + D TGL +GF I F + +A+ +R H+IDG
Sbjct: 34 WVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGD 93
Query: 447 WCDV 436
DV
Sbjct: 94 RVDV 97
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA 478
L + LP+ T E+ ++ F +G++ VQV D +TG KGF ++F EA + A
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAA 336
Score = 36.3 bits (80), Expect = 0.026
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR 469
LIV LP TE+ +R +F +G + +K T+ G +GF F+ F + + AL +
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKY-TKEGKFRGFAFVGFLDEGSASNALAK 62
Score = 35.5 bits (78), Expect = 0.046
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 654 CSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQV-KRDTRTGLSKGFGFIKFAEYEAQLRA 478
C+ L+V LP++ + + V F +FG + +++ K+ + +GFGF+ F + RA
Sbjct: 747 CTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRP----FRAFSFVTFLD 259
++ V T + LR++F +GQ++D + FR F+FV FLD
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLD 52
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYE 493
+ V + + +E+ +R FS G++L +++ D TG KG+GFI+F + +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -2
Query: 678 ESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
E+P P +C L V L TTE+ +RD F FG++ + D +G S+GFGFI F
Sbjct: 70 ENPQPS-KC--LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Frame = -2
Query: 360 TAEDLREYFGSFGQVT--DVFVPRP---FRAFSFVTF---LDPEVAR-SLCGQDHIIKGV 208
T +DLR+ FG FG++ D+ RP R F F+ F D AR LC D + G
Sbjct: 88 TEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD--LDGH 145
Query: 207 SVNISTASPKRERSTTAASGLG 142
+ + + KR S T +G
Sbjct: 146 KIRVDFSLTKRGHSPTPGQYMG 167
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSS-FGDLLMVQVKRDTRTGLSKGFGFIKFAE 499
+ V LP++ TE+A+ +FS+ G + V++ RD TG KGF F+ F +
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQ 297
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 39.1 bits (87), Expect = 0.004
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD----PEVARSLCGQD 226
KV+VG + T+++L E F FG++ V+V R F+FV + D + R+L G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 225 HIIKGVSVNISTASPKRERSTTAASGL----GWGRMLGWPADAWPLPAPH 88
I GV + ++ +R G G GR G + A P P+
Sbjct: 64 --ICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDSGLRSSASPSAIPN 111
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 666 PRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
P R L V G TE+ + F FGD++ + + D +G +GFGF++F
Sbjct: 6 PHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = -2
Query: 396 RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPF-----RAFSFVTF-LDPEVARSLC 235
R ++VG TE++T + L F FG V + +P + R F FV F + + A ++
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 234 GQDHI-IKGVSVNISTASPKR--ERS 166
+ + G ++ ++ A P + ERS
Sbjct: 71 NMNESELFGKTIRVNFARPPKATERS 96
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2
Query: 624 WKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
WK+T + ++F+ G + V + +D TG K F F++F + E+ AL
Sbjct: 55 WKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL 104
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 429 PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPR 295
P ++ T R V+VG T ++ E+F G+V V +P+
Sbjct: 35 PTAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPK 79
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD----PEVARSLCGQD 226
KV+VG + T+++L E F FG++ V+V R F+FV + D + R+L G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 225 HIIKGVSVNISTASPKRERSTTAASGLG 142
I GV + ++ +R G G
Sbjct: 64 --ICGVRARVELSTGQRRGGGGRGGGFG 89
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD----PEVARSLCGQD 226
KV+VG + T+++L E F FG++ V+V R F+FV + D + R+L G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 225 HIIKGVSVNISTASPKRERSTTAASGLG 142
I GV + ++ +R G G
Sbjct: 64 --ICGVRARVELSTGQRRGGGGRGGGFG 89
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRA 478
+ V + + TE+ V D FS +G + + + D RTG KG+ + EYE Q A
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALV---EYETQKEA 109
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
GL + +E V FS +G+++ + + RD TG SKGF F+ + + + + A+
Sbjct: 44 GLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAV 96
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/137 (22%), Positives = 56/137 (40%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR 466
L V +P E +R F G + V +K T + F + + Q +A +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQD 230
Query: 465 HMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFR 286
I ++I GK S R++FVG E L++ FG FG V ++ +
Sbjct: 231 RPIRAGGSRMKIGYGK---SQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHG-Q 286
Query: 285 AFSFVTFLDPEVARSLC 235
+++V + + ++ C
Sbjct: 287 PYAYVVYENTHTSQEAC 303
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/137 (22%), Positives = 56/137 (40%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR 466
L V +P E +R F G + V +K T + F + + Q +A +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQD 230
Query: 465 HMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFR 286
I ++I GK S R++FVG E L++ FG FG V ++ +
Sbjct: 231 RPIRAGGSRMKIGYGK---SQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHG-Q 286
Query: 285 AFSFVTFLDPEVARSLC 235
+++V + + ++ C
Sbjct: 287 PYAYVVYENTHTSQEAC 303
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 37.5 bits (83), Expect = 0.011
Identities = 31/137 (22%), Positives = 56/137 (40%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRR 466
L V +P E +R F G + V +K T + F + + Q +A +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQD 207
Query: 465 HMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFR 286
I ++I GK S R++FVG E L++ FG FG V ++ +
Sbjct: 208 RPIRAGGSRMKIGYGK---SQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHG-Q 263
Query: 285 AFSFVTFLDPEVARSLC 235
+++V + + ++ C
Sbjct: 264 PYAYVVYENTHTSQEAC 280
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 481
P ++L + GL T ++ +R+ S +G++ + D T KG+GF+ F +A
Sbjct: 104 PSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAA 163
Query: 480 AL 475
A+
Sbjct: 164 AV 165
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = -2
Query: 630 LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
+P+ E+ + YF FG++L ++V R+ RTG KG+ ++ F
Sbjct: 39 IPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGF 80
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = -2
Query: 621 KTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 445
+ ++E + F + +V R++RT SKG+GF+ F + E +RA+ R M DG++
Sbjct: 213 EVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAM--REM-DGKY 268
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD 259
++++GR T ++ +D+ +F +GQ+ DV + F FV F D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---NGFGFVEFDD 45
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD 259
++++GR T ++ +D+ +F +GQ+ DV + F FV F D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---NGFGFVEFDD 45
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.035
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLD 259
++++GR T ++ +D+ +F +GQ+ DV + F FV F D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK---NGFGFVEFDD 45
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 407 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSP 538
+EP G++TS Q PS +RP+ A S+N++ P P +P
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTP 1508
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 407 DEPSLPFGMRTSHQRPSIMCRRPNARS*ASYSANLMKPKPLDSP 538
+EP G++TS Q PS +RP+ A S+N++ P P +P
Sbjct: 1465 NEPDQTTGLKTSQQPPSFAAKRPSFGRQAQSSSNVIPPAPAPTP 1508
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.035
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA---QLRAL 475
L+++ + T + ++FS+ G + V++ D+RTG SKG +++F + E+ L
Sbjct: 27 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 86
Query: 474 GRRHM----IDGRWCDVRIPNGKDGSSTAHRKVFVGR--------CTEN----ITAEDLR 343
G+R M R C R N SS A FV EN I + +R
Sbjct: 87 GQRLMGAPLQIQRTCAER--NRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIR 144
Query: 342 EYFGSFGQV----TDVFVPRPFRAFSFVTFLDPEVARSLCGQ 229
+ F SFG++ +V R R F+ +TF + + A+ C Q
Sbjct: 145 DIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 186
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 35.9 bits (79), Expect = 0.035
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA---QLRAL 475
L+++ + T + ++FS+ G + V++ D+RTG SKG +++F + E+ L
Sbjct: 172 LLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALN 231
Query: 474 GRRHM----IDGRWCDVRIPNGKDGSSTAHRKVFVGR--------CTEN----ITAEDLR 343
G+R M R C R N SS A FV EN I + +R
Sbjct: 232 GQRLMGAPLQIQRTCAER--NRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIR 289
Query: 342 EYFGSFGQV----TDVFVPRPFRAFSFVTFLDPEVARSLCGQ 229
+ F SFG++ +V R R F+ +TF + + A+ C Q
Sbjct: 290 DIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 331
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.5 bits (78), Expect = 0.046
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL--- 475
L V L T+E + F+ G ++ ++ + GL+ + F++F+++ AL
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHNQATLALQSH 98
Query: 474 GRRHMIDGR----WC-DVRIP--NGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 316
R +++ W + R P N ++ H VFVG I + LRE F FG+V
Sbjct: 99 NGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEV 158
Query: 315 TDVFVPR 295
++ + R
Sbjct: 159 SEAKIIR 165
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -2
Query: 675 SPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEY 496
S P R + V L + +R+ F FG++ ++ RD T KG+GF+ +
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRR 183
Query: 495 EAQLRALGRRHMIDGRW 445
E RA+ ++G W
Sbjct: 184 EDAERAIDE---MNGAW 197
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 35.1 bits (77), Expect = 0.061
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = -2
Query: 651 SDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
++L + GL T ++ +R+ S +G++ + D T KG+GF+ F +A A+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAV 139
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 460
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 399 HRKVFVGRCTENITAEDLREYFGSFGQV 316
HR VF+G +TAE++ + F FG V
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 345
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 460
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 399 HRKVFVGRCTENITAEDLREYFGSFGQV 316
HR VF+G +TAE++ + F FG V
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 345
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 460
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 111 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 168
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 399 HRKVFVGRCTENITAEDLREYFGSFGQV 316
HR VF+G +TAE++ + F FG V
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 131
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHM 460
GLP T E + FS FG +L+V + D G KG + F A RAL ++ +
Sbjct: 325 GLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALEKKFL 382
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 399 HRKVFVGRCTENITAEDLREYFGSFGQV 316
HR VF+G +TAE++ + F FG V
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVV 345
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMI 457
GLPW+ TE+ +RD+F + G + +++ R R G + G + F E AL + R +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 456 DGRWCDV 436
R+ +V
Sbjct: 68 GSRYIEV 74
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = -2
Query: 633 GLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMI 457
GLPW+ TE+ +RD+F + G + +++ R R G + G + F E AL + R +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 456 DGRWCDV 436
R+ +V
Sbjct: 68 GSRYIEV 74
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2
Query: 660 PRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLR 481
P ++L + LP + + + F+ FG +L +V D T LSK FGF+ + ++
Sbjct: 332 PDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATN 391
Query: 480 AL 475
A+
Sbjct: 392 AI 393
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
+ V G P TTE +R++F F + V++ + + G SKG+GFI F
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITF 113
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPF----RAFSFVTFLDPEVARSL 238
++FVG + T +LRE+F F V DV + + + + F+TF + A +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEI 122
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
+ V G P TTE +R++F F + V++ + + G SKG+GFI F
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVK-SLDGQSKGYGFITF 114
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -2
Query: 393 KVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPF----RAFSFVTFLDPEVARSL 238
++FVG + T +LRE+F F V DV + + + + F+TF + A +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEI 123
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 33.9 bits (74), Expect = 0.14
Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 27/181 (14%)
Frame = -2
Query: 612 EEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRH--MIDGRWCD 439
+E + F+ FG++ +V T G SKGFGF+ FA E A+ H I+G
Sbjct: 166 KETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLK 223
Query: 438 VRIPNGKDGSS---------TAHR----------KVFVGRCTENITAEDLREYFGSFGQV 316
+ + + S H+ ++V E + + L++ F S+G +
Sbjct: 224 LHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNI 283
Query: 315 TDVFVPRP----FRAFSFVTFLDPEVARSLCGQ--DHIIKGVSVNISTASPKRERSTTAA 154
T V + F FV F PE A S + ++ + ++ A K +R A
Sbjct: 284 TSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLA 343
Query: 153 S 151
S
Sbjct: 344 S 344
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 648 DLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 475
+L V L ++ ++ F S+G++ +V D G SKGFGF+ F + E A+
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAV 314
Score = 31.1 bits (67), Expect = 1.00
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = -2
Query: 390 VFVGRCTENITAEDLREYFGSFGQVTD---VFVPRPFRAFSFVTFLDPEVARSLCG--QD 226
V+V ++ E L + F FG +T + V + F FV F +PE A + D
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 225 HIIKG--VSVNISTASPKRER 169
I+G + +++ A K ER
Sbjct: 215 STIEGTDLKLHVCRAQKKSER 235
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -2
Query: 687 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIK 508
P +S +P S + V + K ++E +R + G++ + + + G +GFGF
Sbjct: 35 PAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSN-GKLQGFGFCH 93
Query: 507 FAEYEAQLRALGRRH 463
F + E LRAL H
Sbjct: 94 FTDLEGTLRALRILH 108
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = -2
Query: 687 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIK 508
P +S +P S + V + K ++E +R + G++ + + + G +GFGF
Sbjct: 35 PAQQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSN-GKLQGFGFCH 93
Query: 507 FAEYEAQLRALGRRH 463
F + E LRAL H
Sbjct: 94 FTDLEGTLRALRILH 108
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -2
Query: 681 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
A+ PP + L V L TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 234 ADEVPPE---NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -2
Query: 681 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
A+ PP + L V L TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 234 ADEVPPE---NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = -2
Query: 681 AESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKF 505
A+ PP + L V L TT+E + FS FG + ++ RD R+G S + FI+F
Sbjct: 165 ADEVPPE---NVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA--QLRALG 472
+ V +P+ E+ + F ++G +L V++ + R SKGFGF+ E+ + RA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAAL 110
Query: 471 RRHMIDGRWCDVR 433
+ GR +VR
Sbjct: 111 HESHVQGRIIEVR 123
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 454
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 454
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = -2
Query: 615 TEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMID 454
+E ++ F +FG+++ Q+ R +GFG+++F +Q A+ +M D
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFD 272
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEA--QLRALG 472
+ V +P+ E+ + F ++G +L V++ + R SKGFGF+ E+ + RA
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAAL 110
Query: 471 RRHMIDGRWCDVR 433
+ GR +VR
Sbjct: 111 HESHVQGRIIEVR 123
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.43
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = -2
Query: 396 RKVFVGRCTENITAEDLREYF---GSFGQVT---DVFVPRPFRAFSFVTFLDPE-VARSL 238
+ V+VG TAE++ ++F GS +VT D F P + F++V F + E + +L
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHP-KGFAYVEFTEKEGMQNAL 136
Query: 237 CGQDHIIKGVSVNISTASPKR 175
D +++G + + PKR
Sbjct: 137 AMTDSLLRGRQIKV---DPKR 154
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 32.3 bits (70), Expect = 0.43
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Frame = -2
Query: 693 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGF 514
+F ++ P + V L + TTE+ +R + ++ + +GF +
Sbjct: 579 SFAVQKAAPGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFA--RKANSDLVHRGFAY 636
Query: 513 IKFA-EYEAQLRALGRRHMIDGR--WCDVRIPNGKDG---SSTAHR-KVFVGRCTENITA 355
+ + +AQ L R + GR + P + G S+T + KVFV T
Sbjct: 637 VVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATD 696
Query: 354 EDLREYFGSFGQVTDV----FVPRPFRAFSFVTFLDPEVARSLC---GQDHIIKGVSVNI 196
++L+ F FG VT V + +FV F D E + C G +++ + +
Sbjct: 697 DELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDF-DTEASAQKCVASGDKLMLRERELEV 755
Query: 195 STASP--KRERSTTAASGLG 142
+ ++P K+++S + +G
Sbjct: 756 ALSNPPVKKDKSHGKPAAIG 775
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 499
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 340
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -2
Query: 411 SSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPRPFRAFSFVTFLDPEVARSLCG 232
+S RK+ V + +T L+ +F +G++T +PR + S L P+ +R+ CG
Sbjct: 107 TSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTL-PKHSRN-CG 164
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 499
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 340
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 499
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 315
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -2
Query: 645 LIVLGLPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAE 499
+ + GLP TE+ V++ SFG L + D++ G SKG+ F ++ +
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 318
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 31.1 bits (67), Expect = 1.00
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -2
Query: 429 PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPR 295
P ++ + + VF+G N T E++ E+F GQ+ +P+
Sbjct: 44 PTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPK 88
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 341 SLRSSAVIFSVQRPTNTFR*AVDEPSLPFGMRTSHQRPSIMCRRPN 478
S RSS F + TN R A DE +LP + RPS+ R N
Sbjct: 983 SPRSSTDYFEFGKYTNALRSATDEFALPTRKTSVESRPSVAILRSN 1028
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 456 DGRWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFG 322
D W +P S T RK+FVG +IT L++ FG FG
Sbjct: 276 DATWFG-ELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 687 PRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFG 577
PR + P R + V G+PW TE A++D F FG
Sbjct: 285 PRDYTSPTFSR--KIFVGGVPWDITEAALKDSFGEFG 319
>AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform b
protein.
Length = 760
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 486 LRALGRRHMIDG--RWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT 313
+R G+R + G + CD+ + GKD H F + A+ +R+ + GQ
Sbjct: 612 MRVAGKRIVFSGDTKPCDLLVEEGKDADVLVHESTF----EDGHEADAMRKRHSTMGQAV 667
Query: 312 DV 307
DV
Sbjct: 668 DV 669
>AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform a
protein.
Length = 833
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 486 LRALGRRHMIDG--RWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVT 313
+R G+R + G + CD+ + GKD H F + A+ +R+ + GQ
Sbjct: 685 MRVAGKRIVFSGDTKPCDLLVEEGKDADVLVHESTF----EDGHEADAMRKRHSTMGQAV 740
Query: 312 DV 307
DV
Sbjct: 741 DV 742
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 630 LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFA 502
L + T EE +++ S FG + + + + +G SKG F+ F+
Sbjct: 270 LSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFS 312
>Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical
protein E04D5.3 protein.
Length = 507
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 101 SRHPIPSSQSPTSNTSKXVPP 39
SR+PIP++Q+P S S PP
Sbjct: 321 SRYPIPTTQAPASYPSSPAPP 341
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 621 KTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR 469
+ TE+ + D+F +GD+ ++V + KG FI+F EA RA R
Sbjct: 249 QVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAERAAER 293
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 28.7 bits (61), Expect = 5.3
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +2
Query: 293 GRGTNTSVT*PK-EPKYSLRSSAVIFSVQ--RPTNTFR*AVDEPSLPFGMRTSHQRPSIM 463
GR +T+ P+ P L S+ S + RP T + + P +SHQRPS+
Sbjct: 377 GRSDDTTSLLPRTSPSEDLPSAPSSRSTRLTRPYRTTHHLIPSSTRP----SSHQRPSLQ 432
Query: 464 CRRPNARS*ASYSANLMKPKPLDSPVRVSRFT*TISKSPKEE 589
P RS L +D +R+ ++ +S S E+
Sbjct: 433 PTAPRTRS-CPRRRQLRSRNQIDFSIRIGGYSSDVSSSHAEQ 473
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 466 THDRRALVRCSHPERQGRLVDGSSKGIRRPLYG 368
T D + + C +P+ R+VD S +R+ +YG
Sbjct: 2233 TTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYG 2265
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 466 THDRRALVRCSHPERQGRLVDGSSKGIRRPLYG 368
T D + + C +P+ R+VD S +R+ +YG
Sbjct: 2233 TTDSKFIFACGYPDYSFRIVDTDSGRVRQAVYG 2265
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = -2
Query: 429 PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVTDVFVPR 295
P ++ + + VF+G N T E++ E+F G + +P+
Sbjct: 50 PTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPK 94
>AC024791-11|AAF60659.1| 410|Caenorhabditis elegans Hypothetical
protein Y47G6A.7a protein.
Length = 410
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 134 VCLAGQLMHG-HSRHPIPSSQSPTSNTS 54
+CL+G L+HG + RH PTS+TS
Sbjct: 366 LCLSGMLLHGMNKRHQRAHRPLPTSSTS 393
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = -2
Query: 465 HMIDGRWCDVRIPNGKDGSS--TAHRKVFVGRCT-ENITAEDLREYFGSFGQVTDV-FV- 301
H ID C V ++ +++FV + +T+++L+ FG++G++TDV FV
Sbjct: 6 HEIDRAKCTVEPAKDENDKKLKVESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVS 65
Query: 300 --PRPFRAFSFVTFLD 259
P F +TF D
Sbjct: 66 DSEGPLH-FCIITFAD 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,340,014
Number of Sequences: 27780
Number of extensions: 440124
Number of successful extensions: 1532
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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