Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10o18
(365 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 6.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 20 8.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 20 8.0
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 20 8.0
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 20 8.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 20 8.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 20 8.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -2
Query: 151 DRHNSIDNFTEKRNEKSSHNKGTSEARMALQ 59
D + D ++ NE+ +G SEA L+
Sbjct: 273 DGEGADDRDDDEENEEEEDGRGQSEAEKRLK 303
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 256 NHYFKPIVRRLGSYRTKDEYDCYVE 182
N Y + R SY+ + EY Y E
Sbjct: 37 NRYSRSREREQNSYKNEREYQKYRE 61
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.2 bits (40), Expect = 8.0
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -3
Query: 159 VSVTDITASTTSQKNAMRKVVITKEPRKQEWPCKTH 52
V +++ Q+N +R +V + EWP T+
Sbjct: 325 VKSSELAVRIQRQENNIRPMVKQIDTVAAEWPATTN 360
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.2 bits (40), Expect = 8.0
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +2
Query: 86 SFVMTTFLIAFFCEVVDAVMSV 151
SF+++T L+ F +++ MS+
Sbjct: 397 SFIVSTILLWFINKIIPIRMSI 418
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = -3
Query: 162 GVSVTDITASTTSQKNAM 109
G+ + DI +T Q+N +
Sbjct: 431 GIEIADIKLTTNQQRNIL 448
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -1
Query: 353 KWKNKQENANLNYKYFMQF 297
KW++K ++ KY +Q+
Sbjct: 927 KWQHKSQDTTEVTKYILQY 945
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.2 bits (40), Expect = 8.0
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -1
Query: 353 KWKNKQENANLNYKYFMQF 297
KW++K ++ KY +Q+
Sbjct: 923 KWQHKSQDTTEVTKYILQY 941
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,364
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8680350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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