Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10o17
(405 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001684-1|AAN71439.1| 271|Drosophila melanogaster RE57703p pro... 30 1.4
AY069249-1|AAL39394.1| 271|Drosophila melanogaster GM02347p pro... 30 1.4
AJ238252-1|CAB41432.1| 271|Drosophila melanogaster 1-acylglycer... 30 1.4
AE014134-1520|AAF52680.2| 271|Drosophila melanogaster CG17608-P... 30 1.4
AE014134-1519|AAN10670.1| 271|Drosophila melanogaster CG17608-P... 30 1.4
AY118487-1|AAM49856.1| 870|Drosophila melanogaster LD01372p pro... 28 4.1
AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA... 28 4.1
AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph... 27 9.5
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P... 27 9.5
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P... 27 9.5
>BT001684-1|AAN71439.1| 271|Drosophila melanogaster RE57703p
protein.
Length = 271
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 WGLPWQQQSTVTQCCRPLNFRXMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 256
WG + +S T L +Q+R C L LFP +++ L+ HI LQ
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195
Query: 257 RRPRLPLM 280
+ P P++
Sbjct: 196 KSPVQPVV 203
>AY069249-1|AAL39394.1| 271|Drosophila melanogaster GM02347p
protein.
Length = 271
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 WGLPWQQQSTVTQCCRPLNFRXMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 256
WG + +S T L +Q+R C L LFP +++ L+ HI LQ
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195
Query: 257 RRPRLPLM 280
+ P P++
Sbjct: 196 KSPVQPVV 203
>AJ238252-1|CAB41432.1| 271|Drosophila melanogaster
1-acylglycerol-3-phosphate O-acyltransferaseprotein.
Length = 271
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 WGLPWQQQSTVTQCCRPLNFRXMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 256
WG + +S T L +Q+R C L LFP +++ L+ HI LQ
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195
Query: 257 RRPRLPLM 280
+ P P++
Sbjct: 196 KSPVQPVV 203
>AE014134-1520|AAF52680.2| 271|Drosophila melanogaster CG17608-PB,
isoform B protein.
Length = 271
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 WGLPWQQQSTVTQCCRPLNFRXMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 256
WG + +S T L +Q+R C L LFP +++ L+ HI LQ
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195
Query: 257 RRPRLPLM 280
+ P P++
Sbjct: 196 KSPVQPVV 203
>AE014134-1519|AAN10670.1| 271|Drosophila melanogaster CG17608-PA,
isoform A protein.
Length = 271
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 80 WGLPWQQQSTVTQCCRPLNFRXMLVQQRLCFLPLFPLS*NRAREPLMESTDPQCHI-LQH 256
WG + +S T L +Q+R C L LFP +++ L+ HI LQ
Sbjct: 136 WGTLYIDRSRKTDSINSLQKEAKAIQERNCKLLLFPEGTRNSKDSLLPFKKGSFHIALQG 195
Query: 257 RRPRLPLM 280
+ P P++
Sbjct: 196 KSPVQPVV 203
>AY118487-1|AAM49856.1| 870|Drosophila melanogaster LD01372p
protein.
Length = 870
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 192 LSGNSGRKHSRCCTSIXRKFSGRQH 118
LSG+S HSR T++ RK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212
>AE014296-2536|AAF49616.1| 2139|Drosophila melanogaster CG6498-PA
protein.
Length = 2139
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 192 LSGNSGRKHSRCCTSIXRKFSGRQH 118
LSG+S HSR T++ RK S +QH
Sbjct: 188 LSGSSSSLHSRGYTALLRKISYQQH 212
>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alpha1,2
protein.
Length = 3367
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = -1
Query: 303 KEHGASSCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSIXRKFS 130
K G +C++ GRRC C HW R G+ G + + K
Sbjct: 1164 KRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223
Query: 129 -GRQHC 115
G QHC
Sbjct: 1224 VGGQHC 1229
>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
isoform A protein.
Length = 2731
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = -1
Query: 303 KEHGASSCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSIXRKFS 130
K G +C++ GRRC C HW R G+ G + + K
Sbjct: 1164 KRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223
Query: 129 -GRQHC 115
G QHC
Sbjct: 1224 VGGQHC 1229
>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
isoform B protein.
Length = 3375
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = -1
Query: 303 KEHGASSCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGNSGRKHSRCCTSIXRKFS 130
K G +C++ GRRC C HW R G+ G + + K
Sbjct: 1164 KRTGQCACLANVTGRRCDKCRPGHWNLTAGEGCRDCRCDPHGSRGHECNPWTGQCDCKIG 1223
Query: 129 -GRQHC 115
G QHC
Sbjct: 1224 VGGQHC 1229
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,642,098
Number of Sequences: 53049
Number of extensions: 300489
Number of successful extensions: 564
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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