Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10o07
         (255 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p pro...    62   8e-11
AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA...    60   3e-10
AY118993-1|AAM50853.1|  226|Drosophila melanogaster LP02768p pro...    26   6.0  
AE013599-581|AAF59142.1|  226|Drosophila melanogaster CG8717-PA ...    26   6.0  
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro...    26   8.0  
AY051840-1|AAK93264.1|  561|Drosophila melanogaster LD34444p pro...    26   8.0  
AE014298-1068|AAF46279.1|  625|Drosophila melanogaster CG15324-P...    26   8.0  
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA...    26   8.0  

>BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p
           protein.
          Length = 56

 Score = 62.5 bits (145), Expect = 8e-11
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -3

Query: 166 KMITDIQLAVFSNILGVSIFLLVILYHYINANSSK 62
           KMITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 16  KMITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 50


>AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA
           protein.
          Length = 40

 Score = 60.5 bits (140), Expect = 3e-10
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = -3

Query: 163 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 62
           MITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 1   MITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 34


>AY118993-1|AAM50853.1|  226|Drosophila melanogaster LP02768p
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 163 MITDIQLAVFSNILGVSIFLLVILYHYI-NANSSK*YRSIAAIVKALVSLI 14
           ++T+ Q  V  NI+G ++FL+  L +Y+   N     +    ++  LV +I
Sbjct: 61  VLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVI 111


>AE013599-581|AAF59142.1|  226|Drosophila melanogaster CG8717-PA
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 163 MITDIQLAVFSNILGVSIFLLVILYHYI-NANSSK*YRSIAAIVKALVSLI 14
           ++T+ Q  V  NI+G ++FL+  L +Y+   N     +    ++  LV +I
Sbjct: 61  VLTNEQSIVLVNIIGSTLFLVYTLIYYVFTVNKRACVKQFGFVLTVLVVVI 111


>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
           protein.
          Length = 1098

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 232 KNLNTKLIHNFNNLIQFKTSNLKMITD 152
           + +  KL+ NFN  + F T N   I+D
Sbjct: 717 RKMPPKLVKNFNEFLNFATINKNRISD 743


>AY051840-1|AAK93264.1|  561|Drosophila melanogaster LD34444p
           protein.
          Length = 561

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 232 KNLNTKLIHNFNNLIQFKTSNLKMITD 152
           + +  KL+ NFN  + F T N   I+D
Sbjct: 180 RKMPPKLVKNFNEFLNFATINKNRISD 206


>AE014298-1068|AAF46279.1|  625|Drosophila melanogaster CG15324-PA
           protein.
          Length = 625

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 137 FLQHFGSLHILISYPVSLHKCE 72
           FLQ  G++H+   YP   H C+
Sbjct: 156 FLQRDGTVHLYTYYPYGPHHCQ 177


>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
           protein.
          Length = 1098

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 232 KNLNTKLIHNFNNLIQFKTSNLKMITD 152
           + +  KL+ NFN  + F T N   I+D
Sbjct: 717 RKMPPKLVKNFNEFLNFATINKNRISD 743


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,447,218
Number of Sequences: 53049
Number of extensions: 167894
Number of successful extensions: 271
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 431864640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)