Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10o06
         (514 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    25   1.1  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    24   2.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.0  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    23   8.0  

>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 170 PQIHMLVLLHRSVAARIENETLTKAIRAYSGLTLASXSVDGCVFDAIL 27
           P +  L L     A +  N+T+   +    G+T+    V GCV D ++
Sbjct: 456 PLVLCLWLQEHPGAIQTGNQTVDSTLSVLLGMTILVGGVLGCVLDNLI 503


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 170 PQIHMLVLLHRSVAARIENETLTKAIRAYSGLTLASXSVDGCVFDAIL 27
           P +  L L     A +  N+T+   +    G T+    V GCV D ++
Sbjct: 42  PLVLCLWLQEHPGAIQTGNQTVDSTLSVLLGTTILVGGVLGCVLDNLI 89


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 311 GSAIYPKNTNGCIALSGSCFAFVI 240
           G  ++P   N  I+ SG  + FVI
Sbjct: 416 GEPVHPAQVNTIISFSGERYDFVI 439


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 435 YKRLDRNV*NINIGSLHLR 379
           Y+R  RNV N NIG  + R
Sbjct: 570 YERTFRNVANTNIGDANFR 588


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,109
Number of Sequences: 2352
Number of extensions: 10992
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)