Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10n21
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p pro...    28   5.8  
AY118292-1|AAM48321.1|  262|Drosophila melanogaster GH01164p pro...    28   5.8  
AE014297-1053|AAF54462.1|  262|Drosophila melanogaster CG16904-P...    28   5.8  
AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA...    28   5.8  
BT022681-1|AAY55097.1|  289|Drosophila melanogaster IP07155p pro...    27   7.7  
AE014134-3008|AAF53733.1|  561|Drosophila melanogaster CG15170-P...    27   7.7  
AE014134-2272|AAF53237.1| 2470|Drosophila melanogaster CG5092-PA...    27   7.7  

>AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p
           protein.
          Length = 1058

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/39 (25%), Positives = 24/39 (61%)
 Frame = -3

Query: 196 IVKSMRKILEKYKHEQFDA*KIPNPHSMYGKYANLLEIY 80
           ++++  KIL++   ++F   K+P  +S+YGK     +++
Sbjct: 845 LIRTTLKILQRQIDDKFQIIKMPTDNSVYGKLKRCYQLH 883


>AY118292-1|AAM48321.1|  262|Drosophila melanogaster GH01164p
           protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = +2

Query: 101 IFSIHRMWIRYLLSIELFVFVFFEYFSHRFHDLFGFAVKIFVLAAPVFVVDVMVNRSFWR 280
           IF + R   R +  + +F  VF  + SH     +GF   +F++     +V +++   ++ 
Sbjct: 120 IFFVLRKKQRQITFLHVFHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYA 179

Query: 281 QEYYPGYVISIWSK 322
                    S+W K
Sbjct: 180 SSQSQNVQESLWWK 193


>AE014297-1053|AAF54462.1|  262|Drosophila melanogaster CG16904-PA
           protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = +2

Query: 101 IFSIHRMWIRYLLSIELFVFVFFEYFSHRFHDLFGFAVKIFVLAAPVFVVDVMVNRSFWR 280
           IF + R   R +  + +F  VF  + SH     +GF   +F++     +V +++   ++ 
Sbjct: 120 IFFVLRKKQRQITFLHVFHHVFMVFTSHMLIRFYGFGGHVFLICMFNVLVHIVMYGYYYA 179

Query: 281 QEYYPGYVISIWSK 322
                    S+W K
Sbjct: 180 SSQSQNVQESLWWK 193


>AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA
           protein.
          Length = 1058

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/39 (25%), Positives = 24/39 (61%)
 Frame = -3

Query: 196 IVKSMRKILEKYKHEQFDA*KIPNPHSMYGKYANLLEIY 80
           ++++  KIL++   ++F   K+P  +S+YGK     +++
Sbjct: 845 LIRTTLKILQRQIDDKFQIIKMPTDNSVYGKLKRCYQLH 883


>BT022681-1|AAY55097.1|  289|Drosophila melanogaster IP07155p
           protein.
          Length = 289

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -2

Query: 116 DVWKI--CKSSRNICDSLTARIKTYTNIS 36
           D+WK   C SSR +C+  T  I +Y + S
Sbjct: 45  DLWKFIDCNSSRQVCELKTNNIPSYLSSS 73


>AE014134-3008|AAF53733.1|  561|Drosophila melanogaster CG15170-PA
           protein.
          Length = 561

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +1

Query: 238 RLRCR-CHGQPILLATGILSWVCNFHLEQKRC 330
           RL+C  C GQ  + A       C +HLE+ +C
Sbjct: 107 RLKCHHCAGQECVAAPASKPKPCRYHLEEDQC 138


>AE014134-2272|AAF53237.1| 2470|Drosophila melanogaster CG5092-PA
            protein.
          Length = 2470

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 180  EKYSKNTNTNNSMLKRYLIHIRCME 106
            E Y +N  T++S L+  L H+RC+E
Sbjct: 1428 EHYERNLKTDSSDLEARLGHMRCLE 1452


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,796,570
Number of Sequences: 53049
Number of extensions: 375348
Number of successful extensions: 1126
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)