Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10n17
(671 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089683-1|AAL90421.1| 340|Drosophila melanogaster RH59033p pro... 92 7e-19
AE013599-937|AAF58893.2| 340|Drosophila melanogaster CG1665-PA ... 92 7e-19
AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p pro... 46 6e-05
AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA... 46 6e-05
AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like ... 38 0.009
AY058463-1|AAL13692.1| 391|Drosophila melanogaster GH26380p pro... 32 0.82
AE014134-2481|AAO41192.2| 948|Drosophila melanogaster CG33090-P... 32 0.82
X04754-2|CAA28451.1| 420|Drosophila melanogaster yolk polypepti... 29 5.8
M15898-1|AAA29024.1| 420|Drosophila melanogaster protein ( D.me... 29 5.8
AE014298-1957|AAF48314.2| 420|Drosophila melanogaster CG11129-P... 29 5.8
>AY089683-1|AAL90421.1| 340|Drosophila melanogaster RH59033p
protein.
Length = 340
Score = 91.9 bits (218), Expect = 7e-19
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Frame = -1
Query: 656 CREQRVTANKFYNFTPKDMGALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVV 477
C R+ + F +D G D S ++N +SV DLNTRL V FR NF +
Sbjct: 194 CTNPRLKSMPFIR--QEDSGTFNDATSFMLMNLSSVADLNTRLKNP--VDALQFRGNFEL 249
Query: 476 --EGAEPYAEDGWKFVKIGEN-VFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 309
+ EPYAED W++V+IGE+ VF + PCTRC+ T ++ +T R+S EPL TL+ YR
Sbjct: 250 KMDVDEPYAEDNWQWVRIGEDAVFRTVAPCTRCIFTNINAKTAERSSEGEPLKTLRSYR 308
>AE013599-937|AAF58893.2| 340|Drosophila melanogaster CG1665-PA
protein.
Length = 340
Score = 91.9 bits (218), Expect = 7e-19
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Frame = -1
Query: 656 CREQRVTANKFYNFTPKDMGALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVV 477
C R+ + F +D G D S ++N +SV DLNTRL V FR NF +
Sbjct: 194 CTNPRLKSMPFIR--QEDSGTFNDATSFMLMNLSSVADLNTRLKNP--VDALQFRGNFEL 249
Query: 476 --EGAEPYAEDGWKFVKIGEN-VFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYR 309
+ EPYAED W++V+IGE+ VF + PCTRC+ T ++ +T R+S EPL TL+ YR
Sbjct: 250 KMDVDEPYAEDNWQWVRIGEDAVFRTVAPCTRCIFTNINAKTAERSSEGEPLKTLRSYR 308
>AY118319-1|AAM48348.1| 781|Drosophila melanogaster HL08052p
protein.
Length = 781
Score = 45.6 bits (103), Expect = 6e-05
Identities = 27/97 (27%), Positives = 49/97 (50%)
Frame = -1
Query: 596 ALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVVEGAEPYAEDGWKFVKIGENV 417
+L ++ ++N++SV L + E T FR N +++ + E +K + IG
Sbjct: 654 SLVNQAQFLLLNKSSVRSL--QFEEPLDETVDRFRANIIIDTGSAFEELTYKALSIGGIQ 711
Query: 416 FEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 306
F+V PC RC M ++ TG R + E L T+ + ++
Sbjct: 712 FQVEGPCQRCDMICINQRTGER--SPETLTTISRLQK 746
>AE014298-3026|AAF50901.1| 781|Drosophila melanogaster CG1692-PA
protein.
Length = 781
Score = 45.6 bits (103), Expect = 6e-05
Identities = 27/97 (27%), Positives = 49/97 (50%)
Frame = -1
Query: 596 ALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVVEGAEPYAEDGWKFVKIGENV 417
+L ++ ++N++SV L + E T FR N +++ + E +K + IG
Sbjct: 654 SLVNQAQFLLLNKSSVRSL--QFEEPLDETVDRFRANIIIDTGSAFEELTYKALSIGGIQ 711
Query: 416 FEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 306
F+V PC RC M ++ TG R + E L T+ + ++
Sbjct: 712 FQVEGPCQRCDMICINQRTGER--SPETLTTISRLQK 746
>AF162681-1|AAD50777.1| 737|Drosophila melanogaster maroon-like
protein protein.
Length = 737
Score = 38.3 bits (85), Expect = 0.009
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = -1
Query: 596 ALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVVEGAEPYAEDGWKFVKIGENV 417
+L ++ ++N++SV L + E T FR N +++ + E +K + IG
Sbjct: 654 SLVNQAQFLLLNKSSVRSL--QFEEPLDETVDRFRANIIIDTGSAFEELTYKALSIGGIQ 711
Query: 416 FEVIKPCTRCVMTTVD 369
F+V PC RC M ++
Sbjct: 712 FQVEGPCQRCDMICIN 727
>AY058463-1|AAL13692.1| 391|Drosophila melanogaster GH26380p
protein.
Length = 391
Score = 31.9 bits (69), Expect = 0.82
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -1
Query: 644 RVTANKFYNFTPKDMGALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVV-EGA 468
+V K N P D+G PDE +IN ++ D+N + N + + +R +V+ E A
Sbjct: 49 KVMPRKVKNCVPHDLGD-PDEEPFTLINCYNIHDVNDWKDLNTKFVLQVYRDYYVLNELA 107
Query: 467 EPYAEDGWKFVKI 429
+ +++ KF I
Sbjct: 108 QAQSDNASKFSSI 120
>AE014134-2481|AAO41192.2| 948|Drosophila melanogaster CG33090-PB
protein.
Length = 948
Score = 31.9 bits (69), Expect = 0.82
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -1
Query: 644 RVTANKFYNFTPKDMGALPDELSXNMINEASVEDLNTRLNENCRVTTRNFRPNFVV-EGA 468
+V K N P D+G PDE +IN ++ D+N + N + + +R +V+ E A
Sbjct: 565 KVMPRKVKNCVPHDLGD-PDEEPFTLINCYNIHDVNDWKDLNTKFVLQVYRDYYVLNELA 623
Query: 467 EPYAEDGWKFVKI 429
+ +++ KF I
Sbjct: 624 QAQSDNASKFSSI 636
>X04754-2|CAA28451.1| 420|Drosophila melanogaster yolk polypeptide
3 protein.
Length = 420
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 425 ENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 306
ENV E + TR +V P + RN + P N+LK+Y++
Sbjct: 330 ENVIEAVARATRYFAESVRPGSE-RNFPAVPANSLKQYKE 368
>M15898-1|AAA29024.1| 420|Drosophila melanogaster protein (
D.melanogaster yp3 geneencoding yolk protein 3, complete
cds. ).
Length = 420
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 425 ENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 306
ENV E + TR +V P + RN + P N+LK+Y++
Sbjct: 330 ENVIEAVARATRYFAESVRPGSE-RNFPAVPANSLKQYKE 368
>AE014298-1957|AAF48314.2| 420|Drosophila melanogaster CG11129-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 425 ENVFEVIKPCTRCVMTTVDPETGVRNSASEPLNTLKKYRQ 306
ENV E + TR +V P + RN + P N+LK+Y++
Sbjct: 330 ENVIEAVARATRYFAESVRPGSE-RNFPAVPANSLKQYKE 368
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,900,173
Number of Sequences: 53049
Number of extensions: 432060
Number of successful extensions: 1438
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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