Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10n13
(266 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089285-1|AAL90023.1| 579|Drosophila melanogaster AT08308p pro... 31 0.22
AE014296-3576|AAF51747.2| 579|Drosophila melanogaster CG7634-PA... 31 0.22
AY095533-1|AAM12264.1| 489|Drosophila melanogaster SD03002p pro... 27 3.6
AY069500-1|AAL39645.1| 862|Drosophila melanogaster LD22456p pro... 27 3.6
AE014298-578|AAF45907.1| 862|Drosophila melanogaster CG2938-PB ... 27 3.6
AY061278-1|AAL28826.1| 602|Drosophila melanogaster LD19810p pro... 27 4.8
AJ242855-1|CAB45188.1| 602|Drosophila melanogaster amphiphysin ... 27 4.8
AF171225-1|AAD46684.1| 602|Drosophila melanogaster amphiphysin ... 27 4.8
AE013599-1529|AAF58486.1| 602|Drosophila melanogaster CG8604-PA... 27 4.8
AE014134-3126|AAF53822.1| 377|Drosophila melanogaster CG13082-P... 26 6.3
D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece... 26 8.3
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece... 26 8.3
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece... 26 8.3
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece... 26 8.3
BT011483-1|AAR99141.1| 913|Drosophila melanogaster RE03641p pro... 26 8.3
AY268106-1|AAP03646.1| 913|Drosophila melanogaster painless pro... 26 8.3
AE013599-3983|AAF47293.1| 913|Drosophila melanogaster CG15860-P... 26 8.3
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD... 26 8.3
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC... 26 8.3
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB... 26 8.3
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA... 26 8.3
>AY089285-1|AAL90023.1| 579|Drosophila melanogaster AT08308p
protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.22
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 72 NHLDFSCYLISRLKYFKM*RHEKTKQESH**QNCAFKSRKSAN-S*YCNIYNWNFRVWLT 248
N ++F+ Y I K + + + + +SH C F +RKS + CN Y W F +L
Sbjct: 445 NRMNFAKYPIE--KSYLLHQMAEIHLKSHRFDECCFSARKSIEEAKKCNSYIWQFLCYLL 502
Query: 249 TIK 257
IK
Sbjct: 503 IIK 505
>AE014296-3576|AAF51747.2| 579|Drosophila melanogaster CG7634-PA
protein.
Length = 579
Score = 31.1 bits (67), Expect = 0.22
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 72 NHLDFSCYLISRLKYFKM*RHEKTKQESH**QNCAFKSRKSAN-S*YCNIYNWNFRVWLT 248
N ++F+ Y I K + + + + +SH C F +RKS + CN Y W F +L
Sbjct: 445 NRMNFAKYPIE--KSYLLHQMAEIHLKSHRFDECCFSARKSIEEAKKCNSYIWQFLCYLL 502
Query: 249 TIK 257
IK
Sbjct: 503 IIK 505
>AY095533-1|AAM12264.1| 489|Drosophila melanogaster SD03002p
protein.
Length = 489
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 263 TIFDSSEPYSEVPIINVAILGIC 195
T SSEPY+ + I+ A+ G+C
Sbjct: 357 TCCSSSEPYTTLQIVAYALFGVC 379
>AY069500-1|AAL39645.1| 862|Drosophila melanogaster LD22456p
protein.
Length = 862
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 263 TIFDSSEPYSEVPIINVAILGIC 195
T SSEPY+ + I+ A+ G+C
Sbjct: 357 TCCSSSEPYTTLQIVAYALFGVC 379
>AE014298-578|AAF45907.1| 862|Drosophila melanogaster CG2938-PB
protein.
Length = 862
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 263 TIFDSSEPYSEVPIINVAILGIC 195
T SSEPY+ + I+ A+ G+C
Sbjct: 357 TCCSSSEPYTTLQIVAYALFGVC 379
>AY061278-1|AAL28826.1| 602|Drosophila melanogaster LD19810p
protein.
Length = 602
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 127 NDMRKQNKNPISSKTAPSSPANQ 195
N +RKQ NPI + + SP N+
Sbjct: 245 NTLRKQTSNPIKTSSPVQSPVNK 267
>AJ242855-1|CAB45188.1| 602|Drosophila melanogaster amphiphysin
protein.
Length = 602
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 127 NDMRKQNKNPISSKTAPSSPANQ 195
N +RKQ NPI + + SP N+
Sbjct: 245 NTLRKQTSNPIKTSSPVQSPVNK 267
>AF171225-1|AAD46684.1| 602|Drosophila melanogaster amphiphysin
protein.
Length = 602
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 127 NDMRKQNKNPISSKTAPSSPANQ 195
N +RKQ NPI + + SP N+
Sbjct: 245 NTLRKQTSNPIKTSSPVQSPVNK 267
>AE013599-1529|AAF58486.1| 602|Drosophila melanogaster CG8604-PA
protein.
Length = 602
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 127 NDMRKQNKNPISSKTAPSSPANQ 195
N +RKQ NPI + + SP N+
Sbjct: 245 NTLRKQTSNPIKTSSPVQSPVNK 267
>AE014134-3126|AAF53822.1| 377|Drosophila melanogaster CG13082-PA
protein.
Length = 377
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +1
Query: 151 NPISSKTAPSSP--ANQQIPNI 210
NP+SS T PS+P AN +P I
Sbjct: 19 NPLSSTTEPSTPPAANPDVPQI 40
>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2490 EDEDYIDTGAAILNFYCT 2507
>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2490 EDEDYIDTGAAILNFYCT 2507
>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2504 EDEDYIDTGAAILNFYCT 2521
>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2504 EDEDYIDTGAAILNFYCT 2521
>BT011483-1|AAR99141.1| 913|Drosophila melanogaster RE03641p
protein.
Length = 913
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 159 NGILVLFSHVVTF*NTLNGLLNSTRSLDDYDYVSTRFGLLNFMCTKPIF 13
NG+ V + V+ LNG + T L Y+ V T G F+ +F
Sbjct: 731 NGLAVSDTQVIKAQAELNGAICRTNVLSRYEQVLTGHGRAGFLLGNHLF 779
>AY268106-1|AAP03646.1| 913|Drosophila melanogaster painless
protein.
Length = 913
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 159 NGILVLFSHVVTF*NTLNGLLNSTRSLDDYDYVSTRFGLLNFMCTKPIF 13
NG+ V + V+ LNG + T L Y+ V T G F+ +F
Sbjct: 731 NGLAVSDTQVIKAQAELNGAICRTNVLSRYEQVLTGHGRAGFLLGNHLF 779
>AE013599-3983|AAF47293.1| 913|Drosophila melanogaster CG15860-PA
protein.
Length = 913
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -3
Query: 159 NGILVLFSHVVTF*NTLNGLLNSTRSLDDYDYVSTRFGLLNFMCTKPIF 13
NG+ V + V+ LNG + T L Y+ V T G F+ +F
Sbjct: 731 NGLAVSDTQVIKAQAELNGAICRTNVLSRYEQVLTGHGRAGFLLGNHLF 779
>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
isoform D protein.
Length = 5113
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2491 EDEDYIDTGAAILNFYCT 2508
>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
isoform C protein.
Length = 5127
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2505 EDEDYIDTGAAILNFYCT 2522
>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
isoform B protein.
Length = 5113
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2491 EDEDYIDTGAAILNFYCT 2508
>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
isoform A protein.
Length = 5127
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 78 DDYDYVSTRFGLLNFMCT 25
+D DY+ T +LNF CT
Sbjct: 2505 EDEDYIDTGAAILNFYCT 2522
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,634,017
Number of Sequences: 53049
Number of extensions: 164471
Number of successful extensions: 411
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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