Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10n06
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0355 + 19822110-19824491 33 0.23
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 33 0.23
01_01_0055 - 415666-415767,416510-416602,416776-416850,416920-41... 33 0.30
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 33 0.39
03_05_0483 - 24806984-24808324 31 0.91
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 31 1.6
01_07_0315 - 42692539-42693260,42693357-42693609 31 1.6
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 30 2.1
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 30 2.1
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 30 2.8
04_04_1570 - 34492944-34493159,34493668-34493842,34493964-344940... 30 2.8
07_03_1214 + 24931142-24932314,24934177-24934434 29 3.7
03_05_0994 + 29541109-29542527 29 3.7
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 29 3.7
02_05_0836 - 32106580-32106596,32106783-32107254 29 3.7
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 29 3.7
01_06_0547 + 30130348-30130854 29 3.7
12_01_0468 + 3661177-3661626 29 4.9
10_06_0018 - 9674771-9674995,9675079-9675126,9675471-9675530,967... 29 4.9
09_04_0559 + 18516732-18516746,18516893-18517330 29 4.9
07_03_1228 - 25009736-25010965 29 4.9
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 29 4.9
02_05_0013 + 24975298-24975352,24975533-24976494,24976621-249771... 29 4.9
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 29 6.4
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 29 6.4
07_03_0771 - 21381276-21381461,21381583-21381733,21381823-213820... 29 6.4
07_03_0770 - 21375099-21375122,21375321-21375448,21375541-213756... 29 6.4
03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917... 29 6.4
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 29 6.4
12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775 28 8.5
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 8.5
03_06_0275 + 32806682-32807197,32808118-32808198,32808293-328085... 28 8.5
02_05_0852 - 32218230-32218366,32218457-32218545,32218653-322187... 28 8.5
>06_03_0355 + 19822110-19824491
Length = 793
Score = 33.5 bits (73), Expect = 0.23
Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 5/144 (3%)
Frame = -3
Query: 507 ENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVD 328
E+ +ED ++ T E D H + +V + M +S EV +
Sbjct: 152 ESHVEDKVSKGLEETRAEDVDANHMDLDESEAVDEDAKGKSFGESEMGFVSVEEVSVTHE 211
Query: 327 PAEPKGE---LEGL-NIPEEIIEEDSANRTDTEENIHEIPEEVP-DDRTEGDGDSAPTVS 163
P E EG + +E D+ + +T HE VP DD E DGD +
Sbjct: 212 VMLPNYEEVATEGDGDTAMAAVENDAGSLAETVVMTHEEFVAVPEDDEEEADGDEENDAT 271
Query: 162 ILSSAPETPNVTDAEDVDEFTSEE 91
LS + N D+ D +E + E
Sbjct: 272 GLSLGIGSANDYDSTDGEEDANVE 295
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 33.5 bits (73), Expect = 0.23
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Frame = -3
Query: 636 ETENENLIVNCDSIKAITHVEDDGLFPG--IPSQAIR----PRKVFALQENLIEDPAKSD 475
ETE E N +S++A ++ GL PG I ++AI P + + + KS+
Sbjct: 1345 ETELEER-QNIESVEAEDNIAASGL-PGEEIDTEAIEIESVPHESTTTSVKELNEDVKSN 1402
Query: 474 VKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPKGELEGL 295
V + E E+ +H ++ V++ ++A +L E +PAE + +
Sbjct: 1403 VALAE-EAASEEHILET---EVTVDKSSAQEPEL--------EEIKNTEPAEQEHNITET 1450
Query: 294 NIPEEIIEEDSANRTDT---EENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTD 124
+PEE ++++ A T+T + NI I E DD T I PE +V D
Sbjct: 1451 GLPEEEMKDNEAMETETVPHDSNIESIKELREDDIITASALDVYTQQI----PEQESVED 1506
Query: 123 AEDVDEFTSEEEG 85
+ D T+E G
Sbjct: 1507 MKCTD--TTEHPG 1517
Score = 28.7 bits (61), Expect = 6.4
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = -3
Query: 360 ISFAEVPSEVDPAEPKG-----ELEGLN-IPEEIIEEDSANRTDTEENIHEIPEEVPDDR 199
IS+AE+ E EP+ E +G N PE ++E + D + +IH E+
Sbjct: 2220 ISYAEMTHENTSTEPREVEDTKEKKGFNDFPEFVVETSKQDDVDQDFSIHHQVEDEKSAE 2279
Query: 198 TEGDGDSAPTV 166
TE + + V
Sbjct: 2280 TENNSAESEAV 2290
>01_01_0055 -
415666-415767,416510-416602,416776-416850,416920-417071,
417147-417267,417567-418289,418408-418489,418575-418681,
418757-418822,418941-419057,419157-419402
Length = 627
Score = 33.1 bits (72), Expect = 0.30
Identities = 24/112 (21%), Positives = 49/112 (43%)
Frame = -3
Query: 522 VFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEV 343
V + EN +ED +++ + D A D+ + L + VH+ S+ V
Sbjct: 324 VKSTSENSLEDSTTEELQQDDVPDGDSDSAEDSKSPEMKLFISGVVHNKEDAGAKSYVRV 383
Query: 342 PSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGD 187
P+E++ E K E L IP + + D A+ ++ + ++ ++ + D
Sbjct: 384 PAEINNLE-KDSFE-LYIPGKGSDRDLADTKAAKQKVADMAAKLASELMPSD 433
Score = 29.1 bits (62), Expect = 4.9
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Frame = -3
Query: 498 IEDPAKSDVKVTETEST-DLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPA 322
I D A +D + E D + V NA+ S S+ +V + R F VD +
Sbjct: 248 ITDEANTDTTLKGDEDVEDKEQDVGNAKDS-SVEGLKSVLNFFKSRIPEFKVQVINVDVS 306
Query: 321 EPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA 175
E + EL + EE++++D + ++ E DD +GD DSA
Sbjct: 307 E-EAELAS-DSSEELVQDDVKSTSENSLEDSTTEELQQDDVPDGDSDSA 353
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = -3
Query: 372 PMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTE 193
P +K + + +V EP + + EE+I E++ T T + + ++ E PD +TE
Sbjct: 1222 PDKKTAANDHVEDVTVEEPDKKTAANDPVEEVIPEETDKNTTTNDPVEDVTIEEPDMKTE 1281
Query: 192 GDGDSAPTVSILSSAPETPNVTD---AEDVDEFT 100
+ D ++ A E + + AE DE T
Sbjct: 1282 AN-DPVEEATVEEPAVEAGTIEEIATAEARDEKT 1314
>03_05_0483 - 24806984-24808324
Length = 446
Score = 31.5 bits (68), Expect = 0.91
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -3
Query: 303 EGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTD 124
EG N EE E D D E + E+ DD + +G+ + ++S E + D
Sbjct: 377 EGENDDEEDEEYDDDEEEDMEAGVASGDEDSDDDDDDEEGEKEDMEAGVASRDEDSDDED 436
Query: 123 AEDVD 109
A+D D
Sbjct: 437 ADDTD 441
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -3
Query: 309 ELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVS 163
E+E I EEI EE+ D E + E+ EE D+ E + D VS
Sbjct: 37 EIEYEEIEEEIEEEEVEEDEDVVEEVEEVDEE-EDEEEEEESDETEGVS 84
>01_07_0315 - 42692539-42693260,42693357-42693609
Length = 324
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 550 SFPSDPTEEGLCSTGKFD*RPSEIGCK-SHGNRIYRFTACSRQCPAQ 413
S P P+ + + G+F R ++ C S+GN+ C ++CP Q
Sbjct: 26 SSPRLPSNYHVINPGRFGKRDQQLSCTDSNGNKAVCMAKCDKRCPNQ 72
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -3
Query: 417 RSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR-TDTE 241
R+ + + N+V D + F + EV+ + E+E I EEI EE+ D
Sbjct: 412 RTDNAASANSVEPDKSEECLEFDDEEEEVE----EEEIEYEEIEEEIEEEEEVEEDEDVV 467
Query: 240 ENIHEIPEEVPDDRTEGDGDSAPTVS 163
E + E+ EE D+ + + D VS
Sbjct: 468 EEVEEVDEE-EDEEEDEESDETEGVS 492
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -3
Query: 345 VPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDD 202
+PSE ++ K +LE L + EE+I+E+ + ++ E+P+ +D
Sbjct: 503 LPSEDSVSDRKRKLEFLEMQEELIKEEEKRQEKEDKAKLEVPKATEED 550
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 321 EPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGD 187
E +GE +G + EE EE S + E E EEV +++ G+
Sbjct: 61 EVEGEADGEQVEEEEEEESSVGEEEAEAEGEEEEEEVEEEQGAGE 105
>04_04_1570 -
34492944-34493159,34493668-34493842,34493964-34494068,
34494454-34494623,34494760-34494830,34494950-34496799,
34497003-34497052,34497147-34497263
Length = 917
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = -3
Query: 456 ESTDLQHAVDNAQ-RSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEE 280
+S H +D A S++L + + H MR E P+ G E L +P
Sbjct: 168 QSKGASHCIDVAGGESLTLSSNHVAHAGSEMR------CRKETFPSMADGG-ETLTLPPN 220
Query: 279 IIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPE 142
+ + ++ ++ E+ E PD T DG +S S + E
Sbjct: 221 HVADKLFGDLSSDSSVREVSAERPDSETGNDGSFITLISSTSCSDE 266
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 285 EEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDE 106
E + EED + D EE ++ EE+ +D + D + SS+ E + + ED +E
Sbjct: 256 EYVEEEDDDDEEDYEEE-DDLGEEIDEDGDDEDA-VVEVHDVPSSSDEEEDGIEEEDEEE 313
Query: 105 FTSEEE 88
EEE
Sbjct: 314 DEDEEE 319
>03_05_0994 + 29541109-29542527
Length = 472
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = -3
Query: 261 ANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDEFTSEEEG 85
A R++ + +PE+ DD + +G +A + P VTD E+ D+ +G
Sbjct: 298 ATRSNARKCRMAVPEDDDDDGEQQEGATAVAEEQIKDQPRAMAVTDGEEEDDKVEAMDG 356
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -3
Query: 276 IEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDEFTS 97
+EE+ + EE E P E D+ E S T+S + ETP+V D +
Sbjct: 406 LEEEEEEEEEEEEEEEEEPME--DEDMEDGMQSVDTISSTPTGVETPDVIDLRKLQRKEP 463
Query: 96 EEE 88
E++
Sbjct: 464 EKQ 466
>02_05_0836 - 32106580-32106596,32106783-32107254
Length = 162
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 726 PPLDIDGSRDIDLGPIINLKVRDDNV 649
P + G R + GPI+ LKV +DNV
Sbjct: 29 PVFQVYGRRQVFAGPIVTLKVYEDNV 54
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.5 bits (63), Expect = 3.7
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 14/171 (8%)
Frame = -3
Query: 555 GIPSQAIRPRKVFALQ----ENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNA 388
G+ + P V ALQ + LI P D ++ E+TD + + S T+
Sbjct: 1685 GLLMERETPGGVSALQPSSRKRLIPSPQTRD-DASQGETTDANPPLKKPKEGSSQCTSEL 1743
Query: 387 VHHDLPMRKISFAEVP----SEVDPAEPKGELEG--LNIPEEIIEE----DSANRTDTEE 238
P + A VP +E+D +P E++ ++P E +EE D ++ D E
Sbjct: 1744 KTEQSPHEDV-MAPVPVLPSTELDEQQPGEEMDTDQSSLPVEEVEETREDDLGDKDDMET 1802
Query: 237 NIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDEFTSEEEG 85
+I + D G + A TV + E + ED+ +EEG
Sbjct: 1803 HIDASMDIQGQDAETGIDNDATTVEDVPVKSEAVMESLEEDLKTEDGKEEG 1853
>01_06_0547 + 30130348-30130854
Length = 168
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 726 PPLDIDGSRDIDLGPIINLKVRDDNV 649
P I G R + GPI+ LKV +DNV
Sbjct: 29 PIFQIYGRRQVFAGPIVTLKVYEDNV 54
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 348 EVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTE--ENIHEIPEEVPDDRTEGDG 184
E EV+ E E E + EE IEE+ + E E + E EEV +++ DG
Sbjct: 69 EEEEEVEEEEDIEEEEVVEEEEEEIEEEEVKEEEEELREQVQEAGEEVNEEQQGADG 125
>10_06_0018 -
9674771-9674995,9675079-9675126,9675471-9675530,
9675693-9675758,9675844-9675906,9675985-9676032,
9676150-9676215,9676493-9676558,9676660-9676725,
9676822-9676887,9676975-9677058,9677310-9677654,
9677738-9677833,9678129-9678332,9678434-9678726,
9678833-9678958,9679217-9679226
Length = 643
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -3
Query: 270 EDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDEFTSEE 91
+D + D E N + DD + D D V + + APET T +DV +++
Sbjct: 10 DDDFDINDGESNEDTNDDVDIDDESNEDTDVDINVRVENGAPETRGKTKLKDVWNLSTKL 69
Query: 90 EG*WN 76
+ WN
Sbjct: 70 KDVWN 74
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/90 (24%), Positives = 36/90 (40%)
Frame = -3
Query: 507 ENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVD 328
E + E+ A ++ +V ET+ + A + A V + K A P+
Sbjct: 43 EAVAEEAAPAEAEVAETKEAE-PAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAA 101
Query: 327 PAEPKGELEGLNIPEEIIEEDSANRTDTEE 238
AE K + EE+ EE++A EE
Sbjct: 102 EAEAKEAEPAAQVAEEVKEEEAAPAPAAEE 131
>07_03_1228 - 25009736-25010965
Length = 409
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = -3
Query: 303 EGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTE----GDGDSAPTVSILSSAPETP 136
EG PEE EE+ + EE E PEE ++ E G+ + PE
Sbjct: 292 EGEEEPEEGGEEEEEEEEEEEEEEEEEPEEGGEEEEEPEEGGEEEEEEEEEEEEEEPEEG 351
Query: 135 NVTDAEDVDEFTSEEE 88
+ +D +E EEE
Sbjct: 352 AEEEEDDEEEDEEEEE 367
>03_05_1091 +
30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 263 QQIELTLKKIFMKYPKKFQMIARKVMATALRLFLFYHRHQRRPTSLMQKTLMSLLL 96
Q I +T+KK F ++ Q+ KVMA A + + H R+ T+ + + + L
Sbjct: 692 QYIGITVKKPFQRFQLMNQICYEKVMAAAGKHQVLIFVHSRKETAKTARAIKDIAL 747
>02_05_0013 +
24975298-24975352,24975533-24976494,24976621-24977136,
24977250-24977442,24978108-24978439
Length = 685
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 633 TENENLIVNCDSIKAITHVEDDGLFPGIPSQAIRPR 526
TE N+ N + +A+TH DG + ++ I PR
Sbjct: 423 TEQPNMQANTSTCQAVTHQPPDGSIHSVRTEFINPR 458
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 28.7 bits (61), Expect = 6.4
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%)
Frame = -3
Query: 483 KSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPKG-- 310
K D +E+ES + D +S + P A + D S +E SE + A PKG
Sbjct: 173 KDDSDSSESESDESDSDEDVPTKSKA-PAVAAKNDD--STDGSESESDSEDEDAAPKGAA 229
Query: 309 ELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNV 130
+ E + E+ E+S++ + + EE ++ +E D D + +TP
Sbjct: 230 KKESSSDEEDDSSEESSDDEPKQPQQKKAQEESSEESSEEDSDEEDEKLAKTPKKKTPAA 289
Query: 129 TDAED 115
T +++
Sbjct: 290 TKSQN 294
>07_03_1562 - 27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 28.7 bits (61), Expect = 6.4
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Frame = -3
Query: 486 AKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPKGE 307
AK D+KV E + V ++ T NA H + + V + K
Sbjct: 1170 AKPDLKVCIEEFDEKLSKVHQEKKEQEATTRNAEAHKQRIGSLDKLMVTKRTGKDKGKSA 1229
Query: 306 LEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDR-------TEGDGDSAPTVSILSS 151
E E+++ + + ++ +EN+ E + + ++ TE DGDS S +S
Sbjct: 1230 -EVAEETSEVVDPSTESNSEDKENMPECSDNICSEKSHTSSTFTESDGDSTEVQSARTS 1287
>07_03_0771 -
21381276-21381461,21381583-21381733,21381823-21382060,
21382161-21382368,21382650-21382777,21382892-21383029,
21383160-21384012
Length = 633
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 492 DPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKI-SFAEVPSEVDPAEP 316
D A D VTE + +++AV+N+ R + T V D R I S A+ ++ PA+
Sbjct: 156 DVAGYDRAVTELLNATVRYAVENSTRLFA--TGQRVGADPGFRNIYSMAQCSPDLSPAQC 213
Query: 315 KGELEGL 295
+ L+GL
Sbjct: 214 RSCLDGL 220
>07_03_0770 -
21375099-21375122,21375321-21375448,21375541-21375672,
21377016-21377874
Length = 380
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 492 DPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKI-SFAEVPSEVDPAEP 316
D A D VTE + +Q+AV+N+ R + T V D R I S A+ ++ P +
Sbjct: 159 DVAGYDRAVTELLNATVQYAVENSTRLFA--TGQRVGTDPGFRNIYSMAQCSPDLSPGQC 216
Query: 315 KGELEGL 295
+ L+GL
Sbjct: 217 RSCLDGL 223
>03_02_0955 - 12690405-12690842,12690940-12691130,12691208-12691718,
12692240-12693171,12693260-12693351,12693430-12693509,
12693568-12693621,12693734-12693850,12693949-12694194,
12694273-12694432,12694512-12694576,12694686-12694877,
12694980-12695061,12695153-12695925
Length = 1310
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 285 EEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAE 118
+E+ +A R + EN+ E E PD E +GD P S S + +D E
Sbjct: 1228 DELERNSTAARAASSENMPEEDAEGPDAPLETNGDEDPQASARSDNTVEDSESDEE 1283
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -3
Query: 339 SEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSI 160
S+ + ++ +G+ E L EE EE+ + D EE E P + PD E +S P I
Sbjct: 445 SDENFSDEEGDEEELEEEEEEEEEEEDDDDDDEEE--EEPGDAPDQPGEAGEESPPRSRI 502
Query: 159 LS 154
++
Sbjct: 503 MA 504
>12_02_0669 + 21695391-21697443,21698319-21699030,21699169-21699775
Length = 1123
Score = 28.3 bits (60), Expect = 8.5
Identities = 30/128 (23%), Positives = 50/128 (39%)
Frame = -3
Query: 498 IEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAE 319
IE + + ES + ++ + + S+ AV D + K E S V +E
Sbjct: 401 IEQSPGKEPETGNAESVAIDSSITEVKETDSIA---AVEKDSEISKTESVETASSVVISE 457
Query: 318 PKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPET 139
++G + E SA T+ +E+ E V + TE T + SAP
Sbjct: 458 DDSTVDGKLV--EPTASVSATETEIKEDSSE--GSVTTEPTEAASTEFVTAVVEESAPTA 513
Query: 138 PNVTDAED 115
+V +ED
Sbjct: 514 SSVETSED 521
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -3
Query: 228 EIPEEVPDDRTEGDGDSAP---TVSILSSAPETPNVTDAED 115
E EEV T+GDG S+ TV+ + SAP D ED
Sbjct: 104 EEEEEVETCETDGDGSSSDEMRTVAAMGSAPLLGTTVDEED 144
>03_06_0275 +
32806682-32807197,32808118-32808198,32808293-32808568,
32808670-32809182
Length = 461
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -3
Query: 288 PEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPET---PNVTDAE 118
P + EE + T T + E PD++ G V++L +AP P+ DA+
Sbjct: 47 PYHLGEESFRHWTRTRHGRFSVLERFPDEQVVGAAVGGYRVAVLEAAPRAFLQPSHYDAD 106
Query: 117 DVDEFTSEEEG 85
+V + E EG
Sbjct: 107 EV-FYVKEGEG 116
>02_05_0852 -
32218230-32218366,32218457-32218545,32218653-32218757,
32218899-32219011,32219089-32219157,32219616-32219748,
32219849-32220057
Length = 284
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 834 ATQKXQAAYKGYHVRRNLLHHLKPKKKTESKVDLPG--PPLDIDGSRDIDLG 685
A + AA G+HV ++ + + TE LPG PP +DG+ D G
Sbjct: 25 ALSRSMAAIPGHHVFQSPRARIAVRASTERATWLPGLDPPPHLDGTLPGDFG 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,174,389
Number of Sequences: 37544
Number of extensions: 411262
Number of successful extensions: 1339
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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