Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10n06
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens ... 37 0.11
AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protei... 37 0.11
BC063578-1|AAH63578.1| 584|Homo sapiens SRCAP protein protein. 35 0.44
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 35 0.44
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 35 0.44
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 35 0.44
AF458587-1|AAM49715.1| 302|Homo sapiens hepatoma-derived growth... 34 0.58
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 33 1.0
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 33 1.0
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 33 1.0
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 33 1.0
BC008076-1|AAH08076.1| 920|Homo sapiens BRD8 protein protein. 33 1.0
BC008039-1|AAH08039.1| 920|Homo sapiens BRD8 protein protein. 33 1.0
AF016270-1|AAB87858.1| 920|Homo sapiens thyroid hormone recepto... 33 1.0
AB209079-1|BAD92316.1| 951|Homo sapiens bromodomain containing ... 33 1.0
AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly pro... 33 1.8
X94234-1|CAA63925.1| 835|Homo sapiens skeletal muscle abundant ... 32 2.4
X87613-1|CAA60949.1| 757|Homo sapiens skeletal muscle abundant ... 32 2.4
AY942035-1|AAY33383.1| 107|Homo sapiens anti-rabies virus immun... 32 2.4
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 32 3.1
U75308-1|AAC50901.1| 947|Homo sapiens TBP-associated factor pro... 32 3.1
M33060-1|AAA36092.1| 131|Homo sapiens protein ( Human Ig rearra... 32 3.1
DQ334271-1|ABC67251.1| 284|Homo sapiens ermin protein. 32 3.1
BC026345-1|AAH26345.1| 284|Homo sapiens KIAA1189 protein. 32 3.1
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 3.1
AL137077-3|CAI11046.1| 949|Homo sapiens TAF4 RNA polymerase II,... 32 3.1
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 3.1
AL109911-3|CAI19183.1| 949|Homo sapiens TAF4 RNA polymerase II,... 32 3.1
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 32 3.1
AF124193-1|AAD44142.1| 116|Homo sapiens kappa 1 immunoglobin li... 32 3.1
AF054659-1|AAC97100.1| 116|Homo sapiens kappa 1 immunoglobulin ... 32 3.1
AC016732-1|AAY14889.1| 284|Homo sapiens unknown protein. 32 3.1
AB033015-1|BAA86503.1| 300|Homo sapiens KIAA1189 protein protein. 32 3.1
AL365496-6|CAM19867.1| 719|Homo sapiens protocadherin 15 protein. 31 4.1
AL365496-5|CAM19868.1| 1785|Homo sapiens protocadherin 15 protein. 31 4.1
AL365496-4|CAM19871.1| 981|Homo sapiens protocadherin 15 protein. 31 4.1
AL365496-2|CAM19870.1| 650|Homo sapiens protocadherin 15 protein. 31 4.1
AL360214-9|CAM21540.1| 719|Homo sapiens protocadherin 15 protein. 31 4.1
AL360214-8|CAM21538.1| 1785|Homo sapiens protocadherin 15 protein. 31 4.1
AL360214-7|CAM21539.1| 981|Homo sapiens protocadherin 15 protein. 31 4.1
AL360214-5|CAM21541.1| 650|Homo sapiens protocadherin 15 protein. 31 4.1
AL356114-9|CAM15122.1| 719|Homo sapiens protocadherin 15 protein. 31 4.1
AL356114-8|CAM15119.1| 1785|Homo sapiens protocadherin 15 protein. 31 4.1
AL356114-7|CAM15121.1| 981|Homo sapiens protocadherin 15 protein. 31 4.1
AL356114-5|CAM15118.1| 650|Homo sapiens protocadherin 15 protein. 31 4.1
AL353784-8|CAM16786.1| 719|Homo sapiens protocadherin 15 protein. 31 4.1
AL353784-7|CAM16789.1| 1785|Homo sapiens protocadherin 15 protein. 31 4.1
AL353784-6|CAM16788.1| 981|Homo sapiens protocadherin 15 protein. 31 4.1
AL353784-4|CAM16790.1| 650|Homo sapiens protocadherin 15 protein. 31 4.1
AY867388-1|AAW69259.1| 107|Homo sapiens anti-tetanus toxoid imm... 31 5.5
AY867311-1|AAW69182.1| 107|Homo sapiens anti-tetanus toxoid imm... 31 5.5
AY639929-1|AAT57879.1| 859|Homo sapiens SRC-1 interacting prote... 31 5.5
AY423219-1|AAQ99224.1| 103|Homo sapiens immunoglobulin light ch... 31 5.5
BC036239-1|AAH36239.2| 663|Homo sapiens chromosome 3 open readi... 31 7.2
AY281336-1|AAP34741.1| 108|Homo sapiens immunoglobulin kappa li... 31 7.2
AF103589-1|AAD16649.1| 106|Homo sapiens immunoglobulin kappa li... 31 7.2
X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein. 30 9.5
U78310-1|AAB61140.1| 588|Homo sapiens pescadillo protein. 30 9.5
DQ157848-1|ABA42890.1| 563|Homo sapiens schwannomin interacting... 30 9.5
CR456539-1|CAG30425.1| 583|Homo sapiens PES1 protein. 30 9.5
BC032489-1|AAH32489.1| 588|Homo sapiens pescadillo homolog 1, c... 30 9.5
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 30 9.5
AJ506541-1|CAD44759.1| 84|Homo sapiens immunoglobulin kappa li... 30 9.5
AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein. 30 9.5
AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger ... 30 9.5
>AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens
cDNA FLJ40114 fis, clone TESTI2008762. ).
Length = 691
Score = 36.7 bits (81), Expect = 0.11
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Frame = -3
Query: 480 SDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEV--DPAEPKGE 307
SD + DL+ DN+ S + P N+ + P +E P + D P
Sbjct: 124 SDDDNDDDNGNDLEVPDDNSDDSEA-PDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDN 182
Query: 306 LEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVT 127
+ ++P++ ++ S + +D + + +VPDD+++ D D S S P+ +
Sbjct: 183 SDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSD-DSDVPDDSSDDSDVPDDSS-D 240
Query: 126 DAEDVDEFTSEEE 88
D+E D+ + + E
Sbjct: 241 DSEAPDDSSDDSE 253
>AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protein
protein.
Length = 691
Score = 36.7 bits (81), Expect = 0.11
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Frame = -3
Query: 480 SDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEV--DPAEPKGE 307
SD + DL+ DN+ S + P N+ + P +E P + D P
Sbjct: 124 SDDDNDDDNGNDLEVPDDNSDDSEA-PDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDN 182
Query: 306 LEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVT 127
+ ++P++ ++ S + +D + + +VPDD+++ D D S S P+ +
Sbjct: 183 SDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSD-DSDVPDDSSDDSDVPDDSS-D 240
Query: 126 DAEDVDEFTSEEE 88
D+E D+ + + E
Sbjct: 241 DSEAPDDSSDDSE 253
>BC063578-1|AAH63578.1| 584|Homo sapiens SRCAP protein protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.44
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 348 EVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPT 169
EV + EP+G +E EE +EDS++++D+ E+ E E+ + E G SA
Sbjct: 469 EVDANSSDCEPEGPVEA----EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASE 524
Query: 168 VSILSSAPETPNVTDAEDVDE 106
S + + + + A++ +E
Sbjct: 525 ESESEESEDAQSQSQADEEEE 545
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
cDNA FLJ46149 fis, clone TESTI4000621, moderately
similar to Homo sapiens Snf2-related CBP activator
protein (SRCAP). ).
Length = 2427
Score = 34.7 bits (76), Expect = 0.44
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 348 EVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPT 169
EV + EP+G +E EE +EDS++++D+ E+ E E+ + E G SA
Sbjct: 469 EVDANSSDCEPEGPVEA----EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASE 524
Query: 168 VSILSSAPETPNVTDAEDVDE 106
S + + + + A++ +E
Sbjct: 525 ESESEESEDAQSQSQADEEEE 545
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 34.7 bits (76), Expect = 0.44
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 348 EVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPT 169
EV + EP+G +E EE +EDS++++D+ E+ E E+ + E G SA
Sbjct: 272 EVDANSSDCEPEGPVEA----EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASE 327
Query: 168 VSILSSAPETPNVTDAEDVDE 106
S + + + + A++ +E
Sbjct: 328 ESESEESEDAQSQSQADEEEE 348
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 34.7 bits (76), Expect = 0.44
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = -3
Query: 348 EVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPT 169
EV + EP+G +E EE +EDS++++D+ E+ E E+ + E G SA
Sbjct: 450 EVDANSSDCEPEGPVEA----EEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASE 505
Query: 168 VSILSSAPETPNVTDAEDVDE 106
S + + + + A++ +E
Sbjct: 506 ESESEESEDAQSQSQADEEEE 526
>AF458587-1|AAM49715.1| 302|Homo sapiens hepatoma-derived growth
factor HGDF5 protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.58
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -3
Query: 324 AEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAP 145
AEP+ E E PE+ E++ + E PE P+ E + + P +L A
Sbjct: 134 AEPRPEKECEQEPEQEPEQELEQEPELEPEPEPEPEPEPEPEPEPEPEPQPAYDLL-DAK 192
Query: 144 ETPNVTDAEDVDE 106
E P + +AE D+
Sbjct: 193 EEPGLIEAEPGDQ 205
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 33.5 bits (73), Expect = 1.0
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -3
Query: 318 PKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPET 139
PK L E E+D + D +E+ E +E D +G GDS+ + S S
Sbjct: 627 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDG-GDSSESSSEDESEDGD 685
Query: 138 PNVTDAEDVDEFTSEEE 88
N D ED D+ ++E
Sbjct: 686 ENEEDDEDEDDDEDDDE 702
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 33.5 bits (73), Expect = 1.0
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -3
Query: 318 PKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPET 139
PK L E E+D + D +E+ E +E D +G GDS+ + S S
Sbjct: 664 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDG-GDSSESSSEDESEDGD 722
Query: 138 PNVTDAEDVDEFTSEEE 88
N D ED D+ ++E
Sbjct: 723 ENEEDDEDEDDDEDDDE 739
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 33.5 bits (73), Expect = 1.0
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -3
Query: 318 PKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPET 139
PK L E E+D + D +E+ E +E D +G GDS+ + S S
Sbjct: 664 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDG-GDSSESSSEDESEDGD 722
Query: 138 PNVTDAEDVDEFTSEEE 88
N D ED D+ ++E
Sbjct: 723 ENEEDDEDEDDDEDDDE 739
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 33.5 bits (73), Expect = 1.0
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -3
Query: 318 PKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPET 139
PK L E E+D + D +E+ E +E D +G GDS+ + S S
Sbjct: 627 PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDG-GDSSESSSEDESEDGD 685
Query: 138 PNVTDAEDVDEFTSEEE 88
N D ED D+ ++E
Sbjct: 686 ENEEDDEDEDDDEDDDE 702
>BC008076-1|AAH08076.1| 920|Homo sapiens BRD8 protein protein.
Length = 920
Score = 33.5 bits (73), Expect = 1.0
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Frame = -3
Query: 714 IDGSRDIDLGPIINLKVRDDNVKAMFETENENLIVNCDSIKAITHVEDDGLFPGIPS--- 544
IDG ++DL +++ V + FET + + + D + V D S
Sbjct: 430 IDGKEELDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCE 489
Query: 543 QAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMR 364
+ P+ + E+ I+ V + E T Q +D + T N H+L
Sbjct: 490 ENDDPQSLPGPWEHPIQQERDKPVPLPAPEMTVKQERLDFEE------TENKGIHELVDI 543
Query: 363 KISFAEVPSEVDPAEPKGELEGLNI-----PEEIIEEDSANRTDTEENIHEIP--EEVPD 205
+ AE+ +V+PAEP+ + G I P +E D +E + E V
Sbjct: 544 REPSAEI--KVEPAEPEPVISGAEIVAGVVPATSMEPPELRSQDLDEELGSTAAGEIVEA 601
Query: 204 DRTEGDGDSAPTVSILSSA-PET 139
D G GD P ++ + A PE+
Sbjct: 602 DVAIGKGDETPLTNVKTEASPES 624
>BC008039-1|AAH08039.1| 920|Homo sapiens BRD8 protein protein.
Length = 920
Score = 33.5 bits (73), Expect = 1.0
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Frame = -3
Query: 714 IDGSRDIDLGPIINLKVRDDNVKAMFETENENLIVNCDSIKAITHVEDDGLFPGIPS--- 544
IDG ++DL +++ V + FET + + + D + V D S
Sbjct: 430 IDGKEELDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCE 489
Query: 543 QAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMR 364
+ P+ + E+ I+ V + E T Q +D + T N H+L
Sbjct: 490 ENDDPQSLPGPWEHPIQQERDKPVPLPAPEMTVKQERLDFEE------TENKGIHELVDI 543
Query: 363 KISFAEVPSEVDPAEPKGELEGLNI-----PEEIIEEDSANRTDTEENIHEIP--EEVPD 205
+ AE+ +V+PAEP+ + G I P +E D +E + E V
Sbjct: 544 REPSAEI--KVEPAEPEPVISGAEIVAGVVPATSMEPPELRSQDLDEELGSTAAGEIVEA 601
Query: 204 DRTEGDGDSAPTVSILSSA-PET 139
D G GD P ++ + A PE+
Sbjct: 602 DVAIGKGDETPLTNVKTEASPES 624
>AF016270-1|AAB87858.1| 920|Homo sapiens thyroid hormone receptor
coactivating protein protein.
Length = 920
Score = 33.5 bits (73), Expect = 1.0
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Frame = -3
Query: 714 IDGSRDIDLGPIINLKVRDDNVKAMFETENENLIVNCDSIKAITHVEDDGLFPGIPS--- 544
IDG ++DL +++ V + FET + + + D + V D S
Sbjct: 430 IDGKEELDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCE 489
Query: 543 QAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMR 364
+ P+ + E+ I+ V + E T Q +D + T N H+L
Sbjct: 490 ENDDPQSLPGPWEHPIQQERDKPVPLPAPEMTVKQERLDFEE------TENKGIHELVDI 543
Query: 363 KISFAEVPSEVDPAEPKGELEGLNI-----PEEIIEEDSANRTDTEENIHEIP--EEVPD 205
+ AE+ +V+PAEP+ + G I P +E D +E + E V
Sbjct: 544 REPSAEI--KVEPAEPEPVISGAEIVAGVVPATSMEPPELRSQDLDEELGSTAAGEIVEA 601
Query: 204 DRTEGDGDSAPTVSILSSA-PET 139
D G GD P ++ + A PE+
Sbjct: 602 DVAIGKGDETPLTNVKTEASPES 624
>AB209079-1|BAD92316.1| 951|Homo sapiens bromodomain containing 8
isoform 1 variant protein.
Length = 951
Score = 33.5 bits (73), Expect = 1.0
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 11/203 (5%)
Frame = -3
Query: 714 IDGSRDIDLGPIINLKVRDDNVKAMFETENENLIVNCDSIKAITHVEDDGLFPGIPS--- 544
IDG ++DL +++ V + FET + + + D + V D S
Sbjct: 461 IDGKEELDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCE 520
Query: 543 QAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMR 364
+ P+ + E+ I+ V + E T Q +D + +H + +R
Sbjct: 521 ENDDPQSLPGPWEHPIQQERDKPVPLPAPEMTVKQERLDFEEME-----NKGIHELVDIR 575
Query: 363 KISFAEVPSEVDPAEPKGELEGLNI-----PEEIIEEDSANRTDTEENIHEIP--EEVPD 205
+ S AE+ +V+PAEP+ + G I P +E D +E + E V
Sbjct: 576 EPS-AEI--KVEPAEPEPVISGAEIVAGVVPATSMEPPELRSQDLDEELGSTAAGEIVEA 632
Query: 204 DRTEGDGDSAPTVSILSSA-PET 139
D G GD P ++ + A PE+
Sbjct: 633 DVAIGKGDETPLTNVKTEASPES 655
>AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = -3
Query: 342 PSEVDPAEPKGELEGLNIPEEIIEEDSANRT--DTEENIHEIPEEVPDDRTEGDGDSAPT 169
PSE+ P E + E PE EE + + ++ E+P+E+P+ + E DS
Sbjct: 182 PSEMPPLEGEEEENPKENPEVKAEEKEVPKEIPEVKDEEKEVPKEIPEVKAEEKADSKDC 241
Query: 168 VSILSSAPETPNVTDAEDVDE 106
+ E P D+
Sbjct: 242 MEATPEVKEDPKEVPQVKADD 262
>X94234-1|CAA63925.1| 835|Homo sapiens skeletal muscle abundant
protein 2 protein.
Length = 835
Score = 32.3 bits (70), Expect = 2.4
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Frame = -3
Query: 714 IDGSRDIDLGPIINLKVRDDNVKAMFETENENLIVNCDSIKAITHVEDDGLFPGIPS--- 544
IDG ++DL +++ V + FET + + + D + V D S
Sbjct: 360 IDGKEELDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCE 419
Query: 543 QAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMR 364
+ P+ + E+ I+ V + E T Q +D + T N H+L
Sbjct: 420 ENDDPQSLPGPWEHPIQQERDKPVPLPAPEMTVKQERLDFEE------TENKGIHELVDI 473
Query: 363 KISFAEVPSEVDPAEPKGELEGLNI-----PEEIIEEDSANRTDTEENIHEIP--EEVPD 205
+ AE+ +V+PAEP+ + G I P +E D +E + E +
Sbjct: 474 REPSAEI--KVEPAEPEPVISGAEIVAGVVPATSMEPPELRSQDLDEELGSTAAGEILEA 531
Query: 204 DRTEGDGDSAPTVSILSSA-PET 139
D G GD P ++ + A PE+
Sbjct: 532 DVAIGKGDETPLTNVKTEASPES 554
>X87613-1|CAA60949.1| 757|Homo sapiens skeletal muscle abundant
protein protein.
Length = 757
Score = 32.3 bits (70), Expect = 2.4
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Frame = -3
Query: 714 IDGSRDIDLGPIINLKVRDDNVKAMFETENENLIVNCDSIKAITHVEDDGLFPGIPS--- 544
IDG ++DL +++ V + FET + + + D + V D S
Sbjct: 282 IDGKEELDLAEKMDIAVSYTGEELDFETVGDIIAIIEDKVDDHPEVLDVAAVEAALSFCE 341
Query: 543 QAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMR 364
+ P+ + E+ I+ V + E T Q +D + T N H+L
Sbjct: 342 ENDDPQSLPGPWEHPIQQERDKPVPLPAPEMTVKQERLDFEE------TENKGIHELVDI 395
Query: 363 KISFAEVPSEVDPAEPKGELEGLNI-----PEEIIEEDSANRTDTEENIHEIP--EEVPD 205
+ AE+ +V+PAEP+ + G I P +E D +E + E +
Sbjct: 396 REPSAEI--KVEPAEPEPVISGAEIVAGVVPATSMEPPELRSQDLDEELGSTAAGEILEA 453
Query: 204 DRTEGDGDSAPTVSILSSA-PET 139
D G GD P ++ + A PE+
Sbjct: 454 DVAIGKGDETPLTNVKTEASPES 476
>AY942035-1|AAY33383.1| 107|Homo sapiens anti-rabies virus
immunoglobulin light chain variable region protein.
Length = 107
Score = 32.3 bits (70), Expect = 2.4
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA + +AW + PGN+P S + +ES KFS S S TL+
Sbjct: 16 GDRVTITCRASQGISNYLAWYQQKPGNAPKSLIYAASSLESGVPSKFSGSGSGTDFTLTI 75
Query: 662 RTLR 673
+L+
Sbjct: 76 SSLQ 79
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 507 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 565
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 566 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 625
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 626 LDGKIEAEDFTSRLYRELNSSPQ 648
>U75308-1|AAC50901.1| 947|Homo sapiens TBP-associated factor
protein.
Length = 947
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 371 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 429
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 430 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 489
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 490 LDGKIEAEDFTSRLYRELNSSPQ 512
>M33060-1|AAA36092.1| 131|Homo sapiens protein ( Human Ig
rearranged kappa-chain mRNA V1-J2 region, 5' end. ).
Length = 131
Score = 31.9 bits (69), Expect = 3.1
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 413 LRWALSTACCKXXXXXXXXXXXXXAGSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*V 586
L W L +A C G ++ +CRA + R + W + PG +P
Sbjct: 14 LLW-LRSARCDLKMTQSPSSLPASVGDTVTITCRASQSINRFLNWYQQKPGKAPKLLIYG 72
Query: 587 IAFIESQFTIKFSFSVSNIALTLSSRTLR 673
+ ++S F+ +FS S S TL+ R+L+
Sbjct: 73 ASSLQSGFSSRFSGSGSGTEFTLTIRSLQ 101
>DQ334271-1|ABC67251.1| 284|Homo sapiens ermin protein.
Length = 284
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = -3
Query: 393 NAVHHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIP-- 220
N H + + F + PS+ D K + E EEI ++D N + E+ + I
Sbjct: 149 NKGHQAAEIEWLGFRK-PSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFK 207
Query: 219 ---EEVPDDRTEGDGDSAPTVSILSSAPETPN 133
EEV + EGD +S SS TP+
Sbjct: 208 KKHEEVSQFKEEGDASEDSPLSSASSQAVTPD 239
>BC026345-1|AAH26345.1| 284|Homo sapiens KIAA1189 protein.
Length = 284
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = -3
Query: 393 NAVHHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIP-- 220
N H + + F + PS+ D K + E EEI ++D N + E+ + I
Sbjct: 149 NKGHQAAEIEWLGFRK-PSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFK 207
Query: 219 ---EEVPDDRTEGDGDSAPTVSILSSAPETPN 133
EEV + EGD +S SS TP+
Sbjct: 208 KKHEEVSQFKEEGDASEDSPLSSASSQAVTPD 239
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 509 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 567
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 568 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 627
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 628 LDGKIEAEDFTSRLYRELNSSPQ 650
>AL137077-3|CAI11046.1| 949|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 949
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 373 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 431
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 432 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 491
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 492 LDGKIEAEDFTSRLYRELNSSPQ 514
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 509 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 567
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 568 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 627
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 628 LDGKIEAEDFTSRLYRELNSSPQ 650
>AL109911-3|CAI19183.1| 949|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 949
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 373 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 431
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 432 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 491
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 492 LDGKIEAEDFTSRLYRELNSSPQ 514
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 31.9 bits (69), Expect = 3.1
Identities = 28/143 (19%), Positives = 59/143 (41%), Gaps = 4/143 (2%)
Frame = -3
Query: 558 PGIP--SQAIRPRKVFALQENLIEDPAKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAV 385
PG P ++ + P + Q + + + + + Q + A ++ SL T AV
Sbjct: 509 PGTPIIARQVTPTTIIK-QVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAV 567
Query: 384 HHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANR--TDTEENIHEIPEEV 211
P R + A S + + N +I+ S+ + T+T N+ E+ + +
Sbjct: 568 QTGTPQRTVPGATTTSSAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNL 627
Query: 210 PDDRTEGDGDSAPTVSILSSAPE 142
D + E + ++ L+S+P+
Sbjct: 628 LDGKIEAEDFTSRLYRELNSSPQ 650
>AF124193-1|AAD44142.1| 116|Homo sapiens kappa 1 immunoglobin light
chain variable region protein.
Length = 116
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVS--NIALTL 655
G + +CRA + +AW + PGN+P S + ++S KFS S S N LT+
Sbjct: 16 GDRVTITCRASQDISNFLAWFQQKPGNAPKSLIYAASSLQSGVPSKFSGSGSGTNFTLTI 75
Query: 656 SS 661
SS
Sbjct: 76 SS 77
>AF054659-1|AAC97100.1| 116|Homo sapiens kappa 1 immunoglobulin
light chain variable region protein.
Length = 116
Score = 31.9 bits (69), Expect = 3.1
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVS--NIALTL 655
G + +CRA + +AW + PGN+P S + ++S KFS S S N LT+
Sbjct: 16 GDRVTITCRASQDISNFLAWFQQKPGNAPKSLIYAASSLQSGVPSKFSGSGSGTNFTLTI 75
Query: 656 SS 661
SS
Sbjct: 76 SS 77
>AC016732-1|AAY14889.1| 284|Homo sapiens unknown protein.
Length = 284
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = -3
Query: 393 NAVHHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIP-- 220
N H + + F + PS+ D K + E EEI ++D N + E+ + I
Sbjct: 149 NKGHQAAEIEWLGFRK-PSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFK 207
Query: 219 ---EEVPDDRTEGDGDSAPTVSILSSAPETPN 133
EEV + EGD +S SS TP+
Sbjct: 208 KKHEEVSQFKEEGDASEDSPLSSASSQAVTPD 239
>AB033015-1|BAA86503.1| 300|Homo sapiens KIAA1189 protein protein.
Length = 300
Score = 31.9 bits (69), Expect = 3.1
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = -3
Query: 393 NAVHHDLPMRKISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIP-- 220
N H + + F + PS+ D K + E EEI ++D N + E+ + I
Sbjct: 165 NKGHQAAEIEWLGFRK-PSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFK 223
Query: 219 ---EEVPDDRTEGDGDSAPTVSILSSAPETPN 133
EEV + EGD +S SS TP+
Sbjct: 224 KKHEEVSQFKEEGDASEDSPLSSASSQAVTPD 255
>AL365496-6|CAM19867.1| 719|Homo sapiens protocadherin 15 protein.
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 554 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 613
Query: 105 FTSEEE 88
EE+
Sbjct: 614 EPQEEQ 619
>AL365496-5|CAM19868.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 1620 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 1679
Query: 105 FTSEEE 88
EE+
Sbjct: 1680 EPQEEQ 1685
>AL365496-4|CAM19871.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 816 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 875
Query: 105 FTSEEE 88
EE+
Sbjct: 876 EPQEEQ 881
>AL365496-2|CAM19870.1| 650|Homo sapiens protocadherin 15 protein.
Length = 650
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 485 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 544
Query: 105 FTSEEE 88
EE+
Sbjct: 545 EPQEEQ 550
>AL360214-9|CAM21540.1| 719|Homo sapiens protocadherin 15 protein.
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 554 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 613
Query: 105 FTSEEE 88
EE+
Sbjct: 614 EPQEEQ 619
>AL360214-8|CAM21538.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 1620 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 1679
Query: 105 FTSEEE 88
EE+
Sbjct: 1680 EPQEEQ 1685
>AL360214-7|CAM21539.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 816 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 875
Query: 105 FTSEEE 88
EE+
Sbjct: 876 EPQEEQ 881
>AL360214-5|CAM21541.1| 650|Homo sapiens protocadherin 15 protein.
Length = 650
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 485 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 544
Query: 105 FTSEEE 88
EE+
Sbjct: 545 EPQEEQ 550
>AL356114-9|CAM15122.1| 719|Homo sapiens protocadherin 15 protein.
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 554 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 613
Query: 105 FTSEEE 88
EE+
Sbjct: 614 EPQEEQ 619
>AL356114-8|CAM15119.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 1620 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 1679
Query: 105 FTSEEE 88
EE+
Sbjct: 1680 EPQEEQ 1685
>AL356114-7|CAM15121.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 816 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 875
Query: 105 FTSEEE 88
EE+
Sbjct: 876 EPQEEQ 881
>AL356114-5|CAM15118.1| 650|Homo sapiens protocadherin 15 protein.
Length = 650
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 485 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 544
Query: 105 FTSEEE 88
EE+
Sbjct: 545 EPQEEQ 550
>AL353784-8|CAM16786.1| 719|Homo sapiens protocadherin 15 protein.
Length = 719
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 554 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 613
Query: 105 FTSEEE 88
EE+
Sbjct: 614 EPQEEQ 619
>AL353784-7|CAM16789.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 1620 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 1679
Query: 105 FTSEEE 88
EE+
Sbjct: 1680 EPQEEQ 1685
>AL353784-6|CAM16788.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 816 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 875
Query: 105 FTSEEE 88
EE+
Sbjct: 876 EPQEEQ 881
>AL353784-4|CAM16790.1| 650|Homo sapiens protocadherin 15 protein.
Length = 650
Score = 31.5 bits (68), Expect = 4.1
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 EIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSA-PTVSILSSAPETPNVTDAEDVDE 106
E EE+S + T +EE PE + TE +G+ A + + P V + + E
Sbjct: 485 ETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVKGRKE 544
Query: 105 FTSEEE 88
EE+
Sbjct: 545 EPQEEQ 550
>AY867388-1|AAW69259.1| 107|Homo sapiens anti-tetanus toxoid
immunoglobulin light chain variable region protein.
Length = 107
Score = 31.1 bits (67), Expect = 5.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA +G +AW + PG +P S + ++S KFS S S TL+
Sbjct: 16 GDRVTITCRASQGIGNSLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTI 75
Query: 662 RTLR 673
+L+
Sbjct: 76 SSLQ 79
>AY867311-1|AAW69182.1| 107|Homo sapiens anti-tetanus toxoid
immunoglobulin light chain variable region protein.
Length = 107
Score = 31.1 bits (67), Expect = 5.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA +G +AW + PG +P S + ++S KFS S S TL+
Sbjct: 16 GDRVTITCRASQGIGNSLAWFQQKPGKAPKSLIYAASSLQSGVPSKFSGSGSGTDFTLTI 75
Query: 662 RTLR 673
+L+
Sbjct: 76 SSLQ 79
>AY639929-1|AAT57879.1| 859|Homo sapiens SRC-1 interacting protein
protein.
Length = 859
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -3
Query: 348 EVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIP-EEVPDDRTEGDGDSAP 172
EVP+E + P E+ L PE+ S R T+E H P + +E G +AP
Sbjct: 420 EVPAESSSSPPGSEVASLTQPEK-----STGRVPTQEPTHREPTRQAASQESEEAGGTAP 474
Query: 171 TVSILSSAP 145
+S P
Sbjct: 475 PLSSPPGGP 483
>AY423219-1|AAQ99224.1| 103|Homo sapiens immunoglobulin light chain
variable region protein.
Length = 103
Score = 31.1 bits (67), Expect = 5.5
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRA-KTFLGRIAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA +T G +AW + PG +P ++ +ES +FS S S TL+
Sbjct: 15 GDRVTITCRASQTISGWLAWYQQKPGKAPKLLIYKVSSLESGVPSRFSGSGSGTEFTLTI 74
Query: 662 RTLR 673
+L+
Sbjct: 75 SSLQ 78
>BC036239-1|AAH36239.2| 663|Homo sapiens chromosome 3 open reading
frame 44 protein.
Length = 663
Score = 30.7 bits (66), Expect = 7.2
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = -3
Query: 342 PSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVS 163
P + D E + ELE EE+ EE+ + EE + E EEV ++ G+
Sbjct: 13 PGKKDQKESEEELEEEEEEEEV-EEEEEEVEEEEEEVEEEEEEVVEEELVGEEQELEAPE 71
Query: 162 ILSSAPETPNVTDAEDVDE 106
S VTD D D+
Sbjct: 72 TFSE-EYLWKVTDIGDYDD 89
>AY281336-1|AAP34741.1| 108|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 108
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLGR-IAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA LG +AW + PG++P I+ +E + KFS S S TL+
Sbjct: 16 GDRVTITCRASQRLGNSLAWYQQKPGSAPKLLIYDISTLEIGVSSKFSGSGSGTNFTLAI 75
Query: 662 RTLR 673
++++
Sbjct: 76 KSIQ 79
>AF103589-1|AAD16649.1| 106|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 106
Score = 30.7 bits (66), Expect = 7.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRAKTFLG-RIAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA + R+AW + PG +P S + ++S KFS S S TL+
Sbjct: 12 GDRVTITCRASQGISNRLAWFQQKPGKAPKSLIFAASSLQSGVPSKFSGSGSGTDFTLTI 71
Query: 662 RTLR 673
+L+
Sbjct: 72 SSLQ 75
>X79861-1|CAA56240.1| 250|Homo sapiens cardiac troponin T protein.
Length = 250
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -3
Query: 339 SEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDG---DSAPT 169
S+++ + E E EE EED+ +TEE E EE + + DG +S P
Sbjct: 2 SDIEEVVEEYEEEEQEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKPK 61
Query: 168 VSILSSAPETPNVTDAEDVD 109
P + D E VD
Sbjct: 62 PRSFMPNLVPPKIPDGERVD 81
>U78310-1|AAB61140.1| 588|Homo sapiens pescadillo protein.
Length = 588
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 375 LPMRK-ISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVP-DD 202
LP+ + S ++P + P E EG +P E ++ + R + N++E EE DD
Sbjct: 408 LPVAEYFSGVQLPPHLSPFVT--EKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDD 465
Query: 201 RTEGDGD 181
EGDGD
Sbjct: 466 NNEGDGD 472
>DQ157848-1|ABA42890.1| 563|Homo sapiens schwannomin interacting
protein 1 variant 1 protein.
Length = 563
Score = 30.3 bits (65), Expect = 9.5
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Frame = -3
Query: 489 PAKSDVKVTETESTD-LQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPK 313
P +S VK+ + + LQ +RS S P+ ++ + +F+ D + P
Sbjct: 45 PLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFS------DSSTPD 98
Query: 312 GELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPN 133
+G+++ + S++R ++ N ++ + G S VS L E
Sbjct: 99 YREDGMDLGSDAGSSSSSSRASSQSNSTKVTPCSECKSSSSPGGSLDLVSALEDYEEPFP 158
Query: 132 VTDAEDVDEFTSEEEG 85
V + +DE+ EE+G
Sbjct: 159 VYQKKVIDEWAPEEDG 174
>CR456539-1|CAG30425.1| 583|Homo sapiens PES1 protein.
Length = 583
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 375 LPMRK-ISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVP-DD 202
LP+ + S ++P + P E EG +P E ++ + R + N++E EE DD
Sbjct: 403 LPVAEYFSGVQLPPHLSPFVT--EKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDD 460
Query: 201 RTEGDGD 181
EGDGD
Sbjct: 461 NNEGDGD 467
>BC032489-1|AAH32489.1| 588|Homo sapiens pescadillo homolog 1,
containing BRCT domain (zebrafish) protein.
Length = 588
Score = 30.3 bits (65), Expect = 9.5
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 375 LPMRK-ISFAEVPSEVDPAEPKGELEGLNIPEEIIEEDSANRTDTEENIHEIPEEVP-DD 202
LP+ + S ++P + P E EG +P E ++ + R + N++E EE DD
Sbjct: 408 LPVAEYFSGVQLPPHLSPFVT--EKEGDYVPPEKLKLLALQRGEDPGNLNESEEEEEEDD 465
Query: 201 RTEGDGD 181
EGDGD
Sbjct: 466 NNEGDGD 472
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -3
Query: 252 TDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDEFTSE 94
+D E N + E +P + + DS T + +S PE+ +V ED++ TSE
Sbjct: 1478 SDAEGNYRDSLETLPSTK---ESDSTQTTTPSASCPESNSVNQVEDMEIETSE 1527
>AJ506541-1|CAD44759.1| 84|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 84
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 488 GSSIKFSCRA-KTFLGRIAW-EGIPGNSPSSST*VIAFIESQFTIKFSFSVSNIALTLSS 661
G + +CRA K+ +AW + PG +P T + +ES +FS S S TL+
Sbjct: 2 GDRVTITCRANKSISNYLAWYQQKPGKAPKLLTYKASSLESGVPSRFSGSGSGAEFTLTI 61
Query: 662 RTLR 673
+L+
Sbjct: 62 NSLQ 65
>AB040942-1|BAA96033.1| 1326|Homo sapiens KIAA1509 protein protein.
Length = 1326
Score = 30.3 bits (65), Expect = 9.5
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = -3
Query: 486 AKSDVKVTETESTDLQHAVDNAQRSVSLPTTNAVHHDLPMRKISFAEVPSEVDPAEPKGE 307
A +K E ++ DL V +V T + DL + K+ ++ SE+D + E
Sbjct: 180 AAGKLKELEKDNRDLTKQV-----TVHARTLTTLREDLVLEKLKSQQLSSELDKLSQELE 234
Query: 306 LEGLNIPEEIIEEDSANRTDTEENIHE 226
GLN E +++ED + +DT+ I E
Sbjct: 235 KVGLN-RELLLQEDDSG-SDTKYKILE 259
>AB032251-1|BAA89208.1| 2781|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2781
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -3
Query: 252 TDTEENIHEIPEEVPDDRTEGDGDSAPTVSILSSAPETPNVTDAEDVDEFTSE 94
+D E N + E +P + + DS T + +S PE+ +V ED++ TSE
Sbjct: 1352 SDAEGNYRDSLETLPSTK---ESDSTQTTTPSASCPESNSVNQVEDMEIETSE 1401
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,165,190
Number of Sequences: 237096
Number of extensions: 2281675
Number of successful extensions: 7578
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 6920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7515
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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