Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10n05
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071574-1|AAL49196.1|  168|Drosophila melanogaster RE63412p pro...    35   0.16 
AE014296-3785|EAA46069.1|  168|Drosophila melanogaster CG40045-P...    35   0.16 

>AY071574-1|AAL49196.1|  168|Drosophila melanogaster RE63412p
           protein.
          Length = 168

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 827 KRKVAQCVRKSQEDCS 780
           KRKVA+CVRKSQE+CS
Sbjct: 153 KRKVARCVRKSQEECS 168


>AE014296-3785|EAA46069.1|  168|Drosophila melanogaster CG40045-PA
           protein.
          Length = 168

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = -3

Query: 827 KRKVAQCVRKSQEDCS 780
           KRKVA+CVRKSQE+CS
Sbjct: 153 KRKVARCVRKSQEECS 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,834,392
Number of Sequences: 53049
Number of extensions: 665684
Number of successful extensions: 1378
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)