Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10n02
(664 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145650-1|AAD38625.1| 439|Drosophila melanogaster BcDNA.GH0842... 31 1.8
AE014297-1817|AAF55033.1| 439|Drosophila melanogaster CG9631-PA... 31 1.8
AM412827-1|CAL85450.1| 362|Drosophila melanogaster CG9631 prote... 30 2.4
AM412826-1|CAL85449.1| 362|Drosophila melanogaster CG9631 prote... 30 2.4
AM412825-1|CAL85448.1| 362|Drosophila melanogaster CG9631 prote... 30 2.4
AM412824-1|CAL85447.1| 362|Drosophila melanogaster CG9631 prote... 30 2.4
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 30 3.2
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 30 3.2
BT021470-1|AAX33618.1| 675|Drosophila melanogaster AT09010p pro... 29 4.3
AY099362-1|AAM43805.1| 670|Drosophila melanogaster eyegone prot... 29 4.3
AF091739-1|AAC78330.1| 523|Drosophila melanogaster Eyegone prot... 29 4.3
AE014296-2141|AAX52747.1| 670|Drosophila melanogaster CG10488-P... 29 4.3
AE014296-2140|AAF49918.2| 670|Drosophila melanogaster CG10488-P... 29 4.3
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 29 5.6
BT024961-1|ABE01191.1| 1186|Drosophila melanogaster IP15272p pro... 29 7.5
BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p pro... 29 7.5
BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p pro... 29 7.5
BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p pro... 29 7.5
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro... 29 7.5
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter... 29 7.5
AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,... 29 7.5
AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,... 29 7.5
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,... 29 7.5
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,... 29 7.5
X59275-1|CAA41965.1| 1603|Drosophila melanogaster posterior sex ... 28 9.9
DQ022546-1|AAZ20649.1| 907|Drosophila melanogaster truncated po... 28 9.9
DQ022543-1|AAZ20647.1| 1095|Drosophila melanogaster truncated po... 28 9.9
DQ022542-1|AAZ20646.1| 1601|Drosophila melanogaster posterior se... 28 9.9
DQ022540-1|AAZ20644.1| 1601|Drosophila melanogaster posterior se... 28 9.9
DQ022539-1|AAZ20643.1| 1095|Drosophila melanogaster truncated po... 28 9.9
DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated po... 28 9.9
DQ022537-1|AAZ20641.1| 1072|Drosophila melanogaster truncated po... 28 9.9
AE013599-1624|AAF58434.1| 1601|Drosophila melanogaster CG3886-PA... 28 9.9
>AF145650-1|AAD38625.1| 439|Drosophila melanogaster BcDNA.GH08420
protein.
Length = 439
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 321 SEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALP 211
S+ A E R+RRPPP PS + P P LPS +P
Sbjct: 147 SQKSAPREIVRQRRPPPSTPS----NDPNPFLPSIMP 179
>AE014297-1817|AAF55033.1| 439|Drosophila melanogaster CG9631-PA
protein.
Length = 439
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 321 SEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPSALP 211
S+ A E R+RRPPP PS + P P LPS +P
Sbjct: 147 SQKSAPREIVRQRRPPPSTPS----NDPNPFLPSIMP 179
>AM412827-1|CAL85450.1| 362|Drosophila melanogaster CG9631 protein
protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 291 RERRPPPLVPSVTVVHGPRPSLPSALP 211
R+RRPPP PS + P P LPS +P
Sbjct: 88 RQRRPPPSTPS----NDPNPFLPSIMP 110
>AM412826-1|CAL85449.1| 362|Drosophila melanogaster CG9631 protein
protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 291 RERRPPPLVPSVTVVHGPRPSLPSALP 211
R+RRPPP PS + P P LPS +P
Sbjct: 88 RQRRPPPSTPS----NDPNPFLPSIMP 110
>AM412825-1|CAL85448.1| 362|Drosophila melanogaster CG9631 protein
protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 291 RERRPPPLVPSVTVVHGPRPSLPSALP 211
R+RRPPP PS + P P LPS +P
Sbjct: 88 RQRRPPPSTPS----NDPNPFLPSIMP 110
>AM412824-1|CAL85447.1| 362|Drosophila melanogaster CG9631 protein
protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 291 RERRPPPLVPSVTVVHGPRPSLPSALP 211
R+RRPPP PS + P P LPS +P
Sbjct: 88 RQRRPPPSTPS----NDPNPFLPSIMP 110
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 288 ERRPPPLVPSVTVVHGPRPSLPSALPPQPVYR 193
E PPP P + PRP P A P P Y+
Sbjct: 298 EYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQ 329
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 288 ERRPPPLVPSVTVVHGPRPSLPSALPPQPVYR 193
E PPP P + PRP P A P P Y+
Sbjct: 298 EYGPPPPAPPAGPTYQPRPPAPPAPAPGPTYQ 329
>BT021470-1|AAX33618.1| 675|Drosophila melanogaster AT09010p
protein.
Length = 675
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 194 LYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRST 304
L+ GG G +G GP T T+ SGG ++D S+
Sbjct: 595 LHYSAGGLGSGGEGTGPNTNTTQ--SGGSTMTVDNSS 629
>AY099362-1|AAM43805.1| 670|Drosophila melanogaster eyegone
protein.
Length = 670
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 194 LYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRST 304
L+ GG G +G GP T T+ SGG ++D S+
Sbjct: 590 LHYSAGGLGSGGEGTGPNTNTTQ--SGGSTMTVDNSS 624
>AF091739-1|AAC78330.1| 523|Drosophila melanogaster Eyegone
protein.
Length = 523
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 194 LYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRST 304
L+ GG G +G GP T T+ SGG ++D S+
Sbjct: 474 LHYSAGGLGSGGEGTGPNTNTTQ--SGGSTMTVDNSS 508
>AE014296-2141|AAX52747.1| 670|Drosophila melanogaster CG10488-PB,
isoform B protein.
Length = 670
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 194 LYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRST 304
L+ GG G +G GP T T+ SGG ++D S+
Sbjct: 590 LHYSAGGLGSGGEGTGPNTNTTQ--SGGSTMTVDNSS 624
>AE014296-2140|AAF49918.2| 670|Drosophila melanogaster CG10488-PA,
isoform A protein.
Length = 670
Score = 29.5 bits (63), Expect = 4.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 194 LYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRST 304
L+ GG G +G GP T T+ SGG ++D S+
Sbjct: 590 LHYSAGGLGSGGEGTGPNTNTTQ--SGGSTMTVDNSS 624
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 327 RPSEHLAIVERSRERRPPPLVPSVTVVHGPRPSLPS 220
RP+ L I+ R +RP VPS V P P+L S
Sbjct: 1752 RPNTLLGIIVRCLSKRPADAVPSTPSVPTPVPALSS 1787
>BT024961-1|ABE01191.1| 1186|Drosophila melanogaster IP15272p
protein.
Length = 1186
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRSTIAR 313
CLY + +GS G T T G++GGG ++ + + A+
Sbjct: 769 CLYRPRSAQGNGSSSNGSSATSTGGSNGGGGSNIQQISKAQ 809
>BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p
protein.
Length = 2106
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRSTIAR 313
CLY + +GS G T T G++GGG ++ + + A+
Sbjct: 769 CLYRPRSAQGNGSSSNGSSATSTGGSNGGGGSNIQQISKAQ 809
>BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p
protein.
Length = 2154
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRSTIAR 313
CLY + +GS G T T G++GGG ++ + + A+
Sbjct: 817 CLYRPRSAQGNGSSSNGSSATSTGGSNGGGGSNIQQISKAQ 857
>BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p
protein.
Length = 824
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGG 280
CL TGC G + G G+ T GGG
Sbjct: 224 CLVTGCNGSSIGGVGVAGSGGATASAGGGG 253
>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p
protein.
Length = 1367
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGG 280
CL TGC G + G G+ T GGG
Sbjct: 224 CLVTGCNGSSIGGVGVAGSGGATASAGGGG 253
>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
bicoid-interacting protein BIN3 protein.
Length = 1368
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGG 280
CL TGC G + G G+ T GGG
Sbjct: 224 CLVTGCNGSSIGGVGVAGSGGATASAGGGG 253
>AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,
isoform B protein.
Length = 2117
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRSTIAR 313
CLY + +GS G T T G++GGG ++ + + A+
Sbjct: 780 CLYRPRSAQGNGSSSNGSSATSTGGSNGGGGSNIQQISKAQ 820
>AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,
isoform A protein.
Length = 2165
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGGRRSLDRSTIAR 313
CLY + +GS G T T G++GGG ++ + + A+
Sbjct: 828 CLYRPRSAQGNGSSSNGSSATSTGGSNGGGGSNIQQISKAQ 868
>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
isoform B protein.
Length = 1367
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGG 280
CL TGC G + G G+ T GGG
Sbjct: 224 CLVTGCNGSSIGGVGVAGSGGATASAGGGG 253
>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
isoform A protein.
Length = 1367
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 191 CLYTGCGGKADGSDGLGPCTTVTEGTSGGG 280
CL TGC G + G G+ T GGG
Sbjct: 224 CLVTGCNGSSIGGVGVAGSGGATASAGGGG 253
>X59275-1|CAA41965.1| 1603|Drosophila melanogaster posterior sex
combs protein.
Length = 1603
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 816 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 845
>DQ022546-1|AAZ20649.1| 907|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 907
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>DQ022543-1|AAZ20647.1| 1095|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1095
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>DQ022542-1|AAZ20646.1| 1601|Drosophila melanogaster posterior sex
combs protein.
Length = 1601
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>DQ022540-1|AAZ20644.1| 1601|Drosophila melanogaster posterior sex
combs protein.
Length = 1601
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>DQ022539-1|AAZ20643.1| 1095|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1095
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>DQ022538-1|AAZ20642.1| 1450|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1450
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>DQ022537-1|AAZ20641.1| 1072|Drosophila melanogaster truncated
posterior sex combs protein.
Length = 1072
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
>AE013599-1624|AAF58434.1| 1601|Drosophila melanogaster CG3886-PA
protein.
Length = 1601
Score = 28.3 bits (60), Expect = 9.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 279 PPPLVPSVTVVHGPRPSLPSALPPQPVYRH 190
PPP P + +PS A PP P++ H
Sbjct: 814 PPPAKPPMLAPRKLQPSAQFAPPPSPIHHH 843
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,815,915
Number of Sequences: 53049
Number of extensions: 363659
Number of successful extensions: 1870
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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