Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10m18
         (209 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   6.9  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    21   6.9  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    20   9.1  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 142  WLIRN*NFYVTLNYLCNFKRF 80
            WL    NF  + NY C+ + F
Sbjct: 1507 WLKSVSNFLGSFNYYCDHQNF 1527


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = +2

Query: 119 KILISNEPHTYIRTTLGPSKQYIF 190
           K ++++EPH Y+      S++ ++
Sbjct: 171 KFILASEPHRYVVQRYESSEEELY 194


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -3

Query: 195 YGNIYCLLGPNVVRIYVCGSL 133
           +G +YC +   V  + +C S+
Sbjct: 153 FGTMYCKISQFVAILSICASV 173


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,766
Number of Sequences: 2352
Number of extensions: 1860
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 47
effective length of database: 453,435
effective search space used:  9975570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)