Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10m08
(869 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 27 1.6
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 27 1.6
BT012302-1|AAS77427.1| 778|Drosophila melanogaster RE56731p pro... 25 3.3
AF220425-1|AAK68930.1| 778|Drosophila melanogaster serrano prot... 25 3.3
AE013599-2797|AAM68430.1| 778|Drosophila melanogaster CG12758-P... 25 3.3
AE013599-2796|AAM68429.1| 778|Drosophila melanogaster CG12758-P... 25 3.3
AE013599-2795|AAM68428.1| 778|Drosophila melanogaster CG12758-P... 25 3.3
AE013599-2794|AAF57617.2| 778|Drosophila melanogaster CG12758-P... 25 3.3
AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA... 24 7.0
AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB... 24 7.1
AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB... 26 8.8
AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA... 26 8.8
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 27.5 bits (58), Expect(2) = 1.6
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 489 ILENNETHMLAIFVKGKTMLEIGNHYHHHH 400
+ + ET +L + +G + + H+HHHH
Sbjct: 190 VSDEAETFILTAYEEGVSDDTVSQHHHHHH 219
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 420 NHYHHHHISE 391
+H+HHHH S+
Sbjct: 234 HHHHHHHQSQ 243
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 27.5 bits (58), Expect(2) = 1.6
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 489 ILENNETHMLAIFVKGKTMLEIGNHYHHHH 400
+ + ET +L + +G + + H+HHHH
Sbjct: 190 VSDEAETFILTAYEEGVSDDTVSQHHHHHH 219
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 420 NHYHHHHISE 391
+H+HHHH S+
Sbjct: 234 HHHHHHHQSQ 243
>BT012302-1|AAS77427.1| 778|Drosophila melanogaster RE56731p
protein.
Length = 778
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 420 NHYHHHHISE 391
NHYHH HI E
Sbjct: 456 NHYHHGHIQE 465
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+H+HHHH
Sbjct: 445 GSHHHHHH 452
>AF220425-1|AAK68930.1| 778|Drosophila melanogaster serrano protein
protein.
Length = 778
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 420 NHYHHHHISE 391
NHYHH HI E
Sbjct: 456 NHYHHGHIQE 465
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+H+HHHH
Sbjct: 445 GSHHHHHH 452
>AE013599-2797|AAM68430.1| 778|Drosophila melanogaster CG12758-PD,
isoform D protein.
Length = 778
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 420 NHYHHHHISE 391
NHYHH HI E
Sbjct: 456 NHYHHGHIQE 465
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+H+HHHH
Sbjct: 445 GSHHHHHH 452
>AE013599-2796|AAM68429.1| 778|Drosophila melanogaster CG12758-PC,
isoform C protein.
Length = 778
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 420 NHYHHHHISE 391
NHYHH HI E
Sbjct: 456 NHYHHGHIQE 465
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+H+HHHH
Sbjct: 445 GSHHHHHH 452
>AE013599-2795|AAM68428.1| 778|Drosophila melanogaster CG12758-PB,
isoform B protein.
Length = 778
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 420 NHYHHHHISE 391
NHYHH HI E
Sbjct: 456 NHYHHGHIQE 465
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+H+HHHH
Sbjct: 445 GSHHHHHH 452
>AE013599-2794|AAF57617.2| 778|Drosophila melanogaster CG12758-PA,
isoform A protein.
Length = 778
Score = 25.0 bits (52), Expect(2) = 3.3
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 420 NHYHHHHISE 391
NHYHH HI E
Sbjct: 456 NHYHHGHIQE 465
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+H+HHHH
Sbjct: 445 GSHHHHHH 452
>AE014297-2437|AAF55492.1| 1186|Drosophila melanogaster CG7847-PA,
isoform A protein.
Length = 1186
Score = 24.2 bits (50), Expect(2) = 7.0
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 429 EIGNHYHHHH 400
++ NH+HHHH
Sbjct: 641 QLPNHHHHHH 650
Score = 23.4 bits (48), Expect(2) = 7.0
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 420 NHYHHHHISEI 388
+H+HHHH S++
Sbjct: 649 HHHHHHHHSQL 659
>AE014297-2438|AAN13756.1| 906|Drosophila melanogaster CG7847-PB,
isoform B protein.
Length = 906
Score = 24.2 bits (50), Expect(2) = 7.1
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 429 EIGNHYHHHH 400
++ NH+HHHH
Sbjct: 361 QLPNHHHHHH 370
Score = 23.4 bits (48), Expect(2) = 7.1
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 420 NHYHHHHISEI 388
+H+HHHH S++
Sbjct: 369 HHHHHHHHSQL 379
>AE014296-609|AAG22237.2| 1531|Drosophila melanogaster CG11505-PB,
isoform B protein.
Length = 1531
Score = 25.8 bits (54), Expect(2) = 8.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+HYHHHH
Sbjct: 965 GHHYHHHH 972
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 417 HYHHHHIS 394
H+HHHH S
Sbjct: 969 HHHHHHNS 976
>AE014296-610|AAF47745.1| 1521|Drosophila melanogaster CG11505-PA,
isoform A protein.
Length = 1521
Score = 25.8 bits (54), Expect(2) = 8.8
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -3
Query: 423 GNHYHHHH 400
G+HYHHHH
Sbjct: 955 GHHYHHHH 962
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 417 HYHHHHIS 394
H+HHHH S
Sbjct: 959 HHHHHHNS 966
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,449,847
Number of Sequences: 53049
Number of extensions: 778357
Number of successful extensions: 3022
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2777
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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