Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10m07
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    29   0.25 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.1  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   4.1  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   4.1  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    24   5.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   7.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   7.1  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 28.7 bits (61), Expect = 0.25
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 283 IRNCHINGIQRN--SDDYRCDNVNNEHSHEVVGPRPFDCRHI 164
           +RN    G +R   ++D + DN+NN HS ++ G    D R +
Sbjct: 741 LRNAVFYGGKREDENEDTKADNMNNNHSDQLTGDNSADERAV 782


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 773 LVLWCTSSMELKIRTTG 723
           +V+WCT  + LK+R  G
Sbjct: 93  IVMWCTGQVLLKLRQAG 109


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 90  RPRGVPQIYHLEWSEAPIPI*QHLSMCRQ 176
           RP G P   ++E+   P  +   L +C+Q
Sbjct: 173 RPVGAPNFEYVEFGRVPALLASELKLCQQ 201


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -3

Query: 810 DDVKGTENERKNPSIVVYQFYGAQNQNDWGMSGGNAFDNGAPPLEYDPKTR 658
           D  +  + +R++PS+V  Q    Q Q+      G  +  G P   Y  +T+
Sbjct: 74  DQYQYAQPQRQHPSLVGPQLQQQQQQHQQHGPSGPQYQPGVPLAPYPTETQ 124


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 14/63 (22%), Positives = 24/63 (38%)
 Frame = -2

Query: 592 RSGVYHARYESVFSKDRLSNWHTSHDFNYWAEFRDVLFGVCQKNALQHCVSCFSGYRNVH 413
           R GV   R  + + +        +H      + R++ +G   K A      CF   RNV 
Sbjct: 209 REGVSIDRLNAQYGEGHCEKEFKTHAVECITKHRELAYGSPCKRAYHLLYKCFENVRNVI 268

Query: 412 NCF 404
           + +
Sbjct: 269 SAY 271


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +3

Query: 6   PLKYPISARIGGIYLLWKCRVGMHPSRNRPRGVPQ 110
           P   P +A   G Y++    + +HP  N P  VP+
Sbjct: 805 PPPLPATAEPMGDYMIQPSNIPVHPYCNVPEVVPE 839


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 671 SYSNGGAPLSKALPPDIPQSF*F*AP*NWYTTILGFFLSFSVPFTS-SPN 817
           S  NGG P +  +PP +  +    AP    TT  G     + P TS +PN
Sbjct: 397 SLVNGGTPSTTTMPPSVAPTTSTVAPGTTTTTPTGANPGTTQPPTSDAPN 446


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,017,579
Number of Sequences: 2352
Number of extensions: 23072
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)