Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10m07
(890 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 25 1.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 2.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 2.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 2.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 24 2.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 2.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 3.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 3.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 3.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 3.7
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 4.9
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 6.5
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 6.5
DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein. 22 8.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 8.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 8.6
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 323 NIQTNTTTAVASIAYIKISVL*CTVMNETIVDI 421
+I NTTT ++ + + +L C V T+V I
Sbjct: 171 DIAVNTTTEKGALVTLSVQLLSCEVNGSTLVYI 203
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 2.1
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = -2
Query: 562 SVFSKDRL-SNWHTSHDFNY-WAEFRDVLFGVCQKNALQHCVSCFSGYRNVHNCFVHHG 392
S+FSK L W N E + +C+K + +SGY C H+G
Sbjct: 190 SLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNG 248
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 569 SGVINTRTVNDAVHINIIKTIMNTKRTKSFLVFGSYSN 682
SG + + + H + + + +KR +FGS+SN
Sbjct: 639 SGAKSPTVLEELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 2.1
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = -2
Query: 562 SVFSKDRL-SNWHTSHDFNY-WAEFRDVLFGVCQKNALQHCVSCFSGYRNVHNCFVHHG 392
S+FSK L W N E + +C+K + +SGY C H+G
Sbjct: 190 SLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNG 248
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 569 SGVINTRTVNDAVHINIIKTIMNTKRTKSFLVFGSYSN 682
SG + + + H + + + +KR +FGS+SN
Sbjct: 639 SGAKSPTVLEELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 2.1
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Frame = -2
Query: 562 SVFSKDRL-SNWHTSHDFNY-WAEFRDVLFGVCQKNALQHCVSCFSGYRNVHNCFVHHG 392
S+FSK L W N E + +C+K + +SGY C H+G
Sbjct: 190 SLFSKGCLVGTWSPDPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNG 248
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 569 SGVINTRTVNDAVHINIIKTIMNTKRTKSFLVFGSYSN 682
SG + + + H + + + +KR +FGS+SN
Sbjct: 639 SGAKSPTVLEELTHGTLAASTLYSKRPDLLHLFGSWSN 676
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -2
Query: 547 DRLSNWHTSHDFNYWAEFRDVLFGVCQ 467
D + N+ T YW E R L VCQ
Sbjct: 334 DGIRNYLTKFVSEYWMETRGFLQPVCQ 360
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.4 bits (48), Expect = 2.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +2
Query: 575 VINTRTVNDAVHINIIKTIMNTKRTKSFLVFGS 673
V ++ DA + NI+ ++ R + ++FGS
Sbjct: 318 VKDSGVAKDAAYDNIVLKLLTKPRARGCIIFGS 350
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 882 SNEDTANERKSQNNEIHIDMTRLGDDVKGT 793
S+ D N+ K+QNN + L ++GT
Sbjct: 107 SSNDPKNQYKNQNNNHYTSHQHLRTHLRGT 136
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 97 NYNNYNKHNYNKLYYNINYIEQ 118
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 330 NYNNYNKHNYNKLYYNINYIEQ 351
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 616 HYKNYNEHKTNEIIPSLRIIFQ 681
+Y NYN+H N++ ++ I Q
Sbjct: 330 NYNNYNKHNYNKLYYNINYIEQ 351
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.6 bits (46), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 300 FTKWFIYVIVISTAFSVIVMIIGVTTLITNTHMKSLDLGLLIVGTLINVVILVLEL 133
FT I IV +T V+ +TN + SL L+VG + ++L+L
Sbjct: 44 FTMLIIVTIVGNTLVIAAVITTRRLRSVTNCFVSSLAAADLLVGLAVMPPAVLLQL 99
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 22.2 bits (45), Expect = 6.5
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -2
Query: 547 DRLSNWHTSHDFNYWAEFRDVL 482
D+L+ W T+++ W F +++
Sbjct: 87 DKLAEWFTTNEPEKWNHFVEIM 108
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 22.2 bits (45), Expect = 6.5
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = -2
Query: 547 DRLSNWHTSHDFNYWAEFRDVL 482
D+L+ W T+++ W F +++
Sbjct: 87 DKLAEWFTTNEPEKWNHFVEIM 108
>DQ435335-1|ABD92650.1| 135|Apis mellifera OBP18 protein.
Length = 135
Score = 21.8 bits (44), Expect = 8.6
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -2
Query: 340 CVCLYITGL--FQF*LH*MVHIRNCHINGIQRNSDDYRCDNVNNE 212
CVC+ L FQ L +V I + Q+ DD+R N++ E
Sbjct: 11 CVCVGALTLEEFQIGLRAVVPICRIETSIDQQKEDDFRDGNIDVE 55
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 143 TNITTFINVPT 175
TN+TT IN PT
Sbjct: 833 TNVTTTINTPT 843
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 25 LHELEEYIYYGNV 63
LH L E+IY+G V
Sbjct: 81 LHALVEFIYHGEV 93
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,491
Number of Sequences: 438
Number of extensions: 6232
Number of successful extensions: 36
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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