Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10m06
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    25   2.3  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   5.3  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   7.0  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   9.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   9.2  

>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = -3

Query: 733 PAYQEEKKILPNYASIAEHCNLWRNYDDIEDSWASLTKIMAWFGDN 596
           P +  +++ +     + EH  L RN  +  DSW     ++  + D+
Sbjct: 199 PGHSRQRRSIVPAVPVHEHVRLRRNAAERHDSWVQKQPLLFTYTDD 244


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 175 LYKEEEVRSWDGTSDFEVRINPSGVK 98
           L+  E+ R+W+ + + E  INP+  +
Sbjct: 262 LFIREKERNWEESKETETNINPTDAR 287


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -1

Query: 612 PGLVTTRT-GLLSTPGLDTGTTLIC 541
           PG     T G  +TPGL+T   L C
Sbjct: 223 PGFTQCVTFGFFATPGLETAYNLFC 247


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 641 VFYIIIIAPKVTVLCYRCIVWQYLFFLLI 727
           VFY+   + +   LC   ++ Q +FFLLI
Sbjct: 273 VFYLPADSGEKIALCISILLSQTMFFLLI 301


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 17/60 (28%), Positives = 23/60 (38%)
 Frame = -3

Query: 286  GSFAMAFVSYRDDGIPYAAKFTYYDMQLPQSEFEVQDLYKEEEVRSWDGTSDFEVRINPS 107
            G +A   + Y D G      F YY      SE E+  L  + +    D   D    INP+
Sbjct: 1122 GFYATPDLGY-DFGTNSGKAFNYYTYGAACSEVEIDCLTGDHQAIRTDVVMDLGSSINPA 1180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,008,641
Number of Sequences: 2352
Number of extensions: 23694
Number of successful extensions: 94
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)