Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10m05
(887 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 27 0.58
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 27 0.58
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 27 0.58
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 27 0.58
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 27 0.58
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 27 0.58
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 27 0.58
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 27 0.58
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 27 1.0
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 26 1.3
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 24 5.4
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 146 TLFNPNTRECDHPSKVSCLPVPSLNSV 172
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 146 TLFNPNTRECDHPSKVSCLPVPSLNSV 172
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 145 TLFNPNTRECDHPSKVSCLPVPSLNSV 171
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 145 TLFNPNTRECDHPSKVSCLPVPSLNSV 171
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 145 TLFNPNTRECDHPSKVSCLPVPSLNSV 171
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 145 TLFNPNTRECDHPSKVSCLPVPSLNSV 171
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 217 TLFNPNTRECDHPSKVSCLPVPSLNSV 243
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 27.5 bits (58), Expect = 0.58
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 336 SIINTNLRKCQHP-KISVISLPYHNSL 259
++ N N R+C HP K+S + +P NS+
Sbjct: 216 TLFNPNTRECDHPSKVSCLPVPSLNSV 242
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 26.6 bits (56), Expect = 1.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -1
Query: 653 TISSQCKLDNMSANIQSSNASKVESVI-TPEEVVLVLSPDSLPWYLNIILKKSNLPIHTT 477
T S++C + N +Q SNA TP L + + + Y+ ++ SN+P+H
Sbjct: 775 TASAEC-VTNGDYMLQPSNAPFTPPTDRTPTPPPLPATAEPMGDYM---IQPSNIPVHPY 830
Query: 476 CHVHSSVP 453
C+V VP
Sbjct: 831 CNVPEVVP 838
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 26.2 bits (55), Expect = 1.3
Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 569 PEEVVLVLSPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKI-KAFTQKLKTSENP 393
PE++ + + +P+ + L + + H +K +I +A TQ + P
Sbjct: 727 PEDITITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIVQAVTQLMPNHRGP 786
Query: 392 KVNLRLIFKAAADSELKLSA 333
K + + A ADS ++ +A
Sbjct: 787 KTSRCRLLAAVADSTMRYAA 806
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 24.2 bits (50), Expect = 5.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 278 YPTIIPYDHNDHIVDNLLDICHVLERTSEKN 186
+P + +D N HIV + V+ R EKN
Sbjct: 308 FPFHLMFDRNMHIVQAGRSVSRVIPRIYEKN 338
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 825,378
Number of Sequences: 2352
Number of extensions: 16178
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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