Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10m05
(887 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012670-1|AAT08476.1| 322|Drosophila melanogaster LP12114p pro... 59 9e-09
AY069537-1|AAL39682.3| 301|Drosophila melanogaster LD25772p pro... 59 9e-09
AE014296-2541|AAS64998.1| 301|Drosophila melanogaster CG12304-P... 59 9e-09
AE014296-2540|AAF49612.1| 334|Drosophila melanogaster CG12304-P... 52 1e-06
DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein. 33 0.53
BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p pro... 32 1.2
AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA ... 32 1.2
AY094883-1|AAM11236.1| 443|Drosophila melanogaster RE51913p pro... 29 6.5
AY051458-1|AAK92882.1| 459|Drosophila melanogaster GH13040p pro... 29 6.5
AE014135-28|AAN06558.1| 443|Drosophila melanogaster CG32006-PA ... 29 6.5
AE013599-1044|AAM68775.1| 459|Drosophila melanogaster CG12214-P... 29 6.5
AE013599-1043|AAF58828.1| 459|Drosophila melanogaster CG12214-P... 29 6.5
BT029951-1|ABM92825.1| 415|Drosophila melanogaster IP17244p pro... 29 8.6
BT029920-1|ABM92794.1| 535|Drosophila melanogaster IP03029p pro... 29 8.6
BT001270-1|AAN71026.1| 623|Drosophila melanogaster AT04551p pro... 29 8.6
AY044166-1|AAK98804.1| 422|Drosophila melanogaster potassium in... 29 8.6
AJ344344-1|CAC87637.1| 532|Drosophila melanogaster inwardly rec... 29 8.6
AE014297-3286|AAF56107.1| 532|Drosophila melanogaster CG6747-PA... 29 8.6
>BT012670-1|AAT08476.1| 322|Drosophila melanogaster LP12114p
protein.
Length = 322
Score = 58.8 bits (136), Expect = 9e-09
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Frame = -1
Query: 863 MYVMXRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKGPNNKMTE-------LET 705
MY + ++ D I+LP CMY +KN + L D + + + T +
Sbjct: 22 MYELKTLLPQFD-IKLPTCMYPLKN-VSLAA-DSLASGSSTSASTSASTSSCDDTASVAA 78
Query: 704 RQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPW 525
RQ+++L +LE L ++ I + + + ++ + + ++VV+ P+ +P+
Sbjct: 79 RQEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY 138
Query: 524 YLNIILKKS--NL-PIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENP---KVNLRLIFKA 363
L + LK + NL I HS++ A + K NP K+++ LI+K
Sbjct: 139 AL-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKN 197
Query: 362 AADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLLDICHVLER-TS 195
+E+ S + PI G VNI+RYL P Y+ + + +D +LDIC+ L R +
Sbjct: 198 CEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVLDICYQLLRCNT 257
Query: 194 EKNKEAVVNRLFAHYKTWIY--GDKFSVVDLAAYN 96
K + A+V L + Y G + SV D+ Y+
Sbjct: 258 HKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 292
>AY069537-1|AAL39682.3| 301|Drosophila melanogaster LD25772p
protein.
Length = 301
Score = 58.8 bits (136), Expect = 9e-09
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Frame = -1
Query: 863 MYVMXRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKGPNNKMTE-------LET 705
MY + ++ D I+LP CMY +KN + L D + + + T +
Sbjct: 1 MYELKTLLPQFD-IKLPTCMYPLKN-VSLAA-DSLASGSSTSASTSASTSSCDDTASVAA 57
Query: 704 RQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPW 525
RQ+++L +LE L ++ I + + + ++ + + ++VV+ P+ +P+
Sbjct: 58 RQEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY 117
Query: 524 YLNIILKKS--NL-PIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENP---KVNLRLIFKA 363
L + LK + NL I HS++ A + K NP K+++ LI+K
Sbjct: 118 AL-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKN 176
Query: 362 AADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLLDICHVLER-TS 195
+E+ S + PI G VNI+RYL P Y+ + + +D +LDIC+ L R +
Sbjct: 177 CEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVLDICYQLLRCNT 236
Query: 194 EKNKEAVVNRLFAHYKTWIY--GDKFSVVDLAAYN 96
K + A+V L + Y G + SV D+ Y+
Sbjct: 237 HKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 271
>AE014296-2541|AAS64998.1| 301|Drosophila melanogaster CG12304-PB,
isoform B protein.
Length = 301
Score = 58.8 bits (136), Expect = 9e-09
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Frame = -1
Query: 863 MYVMXRIVDHDDKIELPKCMYHIKNPIDLTEEDEICLKINEKGPNNKMTE-------LET 705
MY + ++ D I+LP CMY +KN + L D + + + T +
Sbjct: 1 MYELKTLLPQFD-IKLPTCMYPLKN-VSLAA-DSLASGSSTSASTSASTSSCDDTASVAA 57
Query: 704 RQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPW 525
RQ+++L +LE L ++ I + + + ++ + + ++VV+ P+ +P+
Sbjct: 58 RQEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY 117
Query: 524 YLNIILKKS--NL-PIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENP---KVNLRLIFKA 363
L + LK + NL I HS++ A + K NP K+++ LI+K
Sbjct: 118 AL-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKN 176
Query: 362 AADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLLDICHVLER-TS 195
+E+ S + PI G VNI+RYL P Y+ + + +D +LDIC+ L R +
Sbjct: 177 CEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVLDICYQLLRCNT 236
Query: 194 EKNKEAVVNRLFAHYKTWIY--GDKFSVVDLAAYN 96
K + A+V L + Y G + SV D+ Y+
Sbjct: 237 HKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 271
>AE014296-2540|AAF49612.1| 334|Drosophila melanogaster CG12304-PA,
isoform A protein.
Length = 334
Score = 52.0 bits (119), Expect = 1e-06
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Frame = -1
Query: 704 RQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVLSPDSLPW 525
RQ+++L +LE L ++ I + + + ++ + + ++VV+ P+ +P+
Sbjct: 91 RQEKVLKQLEELKAQLGQIRAGLGVCGKTFQHTTAFQNGGLKEVPLQDVVINGHPNFIPY 150
Query: 524 YLNIILKKS--NL-PIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENP---KVNLRLIFKA 363
L + LK + NL I HS++ A + K NP K+++ LI+K
Sbjct: 151 AL-LALKNAWRNLYTIDVKTFTHSTMADIGPAAREFEANLAKVPVNPALPKISVTLIWKN 209
Query: 362 AADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLLDICHVLER-TS 195
+E+ S + PI G VNI+RYL P Y+ + + +D +LDIC+ L R +
Sbjct: 210 CEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVLDICYQLLRCNT 269
Query: 194 EKNKEAVVNRLFAHYKTWIY--GDKFSVVDLAAYN 96
K + A+V L + Y G + SV D+ Y+
Sbjct: 270 HKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 304
>DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.
Length = 1873
Score = 33.1 bits (72), Expect = 0.53
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = -1
Query: 803 YHIKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEI-LYERIKTI--SSQCK 633
YHI+ I LT+ K N +NK +E DE +L+I +Y+R+ + SS
Sbjct: 526 YHIRPEIVLTQSSSFMFKQNHNRCSNK---IECSLDECTAELDISIYDRLGALFGSSPFS 582
Query: 632 LDNMSANIQSSNASKVESVITPEEVVLVL 546
D+ S+ + ++ E V+ E + L L
Sbjct: 583 ADSASSTPYPDDPNQTEFVVKSENLRLHL 611
>BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p
protein.
Length = 1906
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = -1
Query: 803 YHIKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEI-LYERIKTI--SSQCK 633
YHI+ I LT+ K N +NK +E DE +L+I +Y+R+ + SS
Sbjct: 545 YHIRPEIVLTQSSSFMFKQNHNRCSNK---IECSLDECTAELDISIYDRLGALFGSSPFS 601
Query: 632 LDNMSANIQSSNASKVESVITPEEVVLVL 546
D+ S+ + ++ E V+ E + L L
Sbjct: 602 GDSASSTPYPDDPNQTEFVVKSENLRLHL 630
>AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA
protein.
Length = 1906
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = -1
Query: 803 YHIKNPIDLTEEDEICLKINEKGPNNKMTELETRQDELLNKLEI-LYERIKTI--SSQCK 633
YHI+ I LT+ K N +NK +E DE +L+I +Y+R+ + SS
Sbjct: 545 YHIRPEIVLTQSSSFMFKQNHNRCSNK---IECSLDECTAELDISIYDRLGALFGSSPFS 601
Query: 632 LDNMSANIQSSNASKVESVITPEEVVLVL 546
D+ S+ + ++ E V+ E + L L
Sbjct: 602 GDSASSTPYPDDPNQTEFVVKSENLRLHL 630
>AY094883-1|AAM11236.1| 443|Drosophila melanogaster RE51913p
protein.
Length = 443
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 260 YDHNDHIVDNLLDIC 216
YD ND I++NLLD+C
Sbjct: 425 YDRNDDILENLLDVC 439
>AY051458-1|AAK92882.1| 459|Drosophila melanogaster GH13040p
protein.
Length = 459
Score = 29.5 bits (63), Expect = 6.5
Identities = 31/121 (25%), Positives = 54/121 (44%)
Frame = -1
Query: 725 KMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVL 546
++ EL+ Q++L + E+ I + + N+S N +S + + T LVL
Sbjct: 86 RVRELDLAQNKLSDWSEVF--SILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVL 143
Query: 545 SPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIFK 366
+ L W L K NLP+ H+ + + L + Q+L+ +E P+ R I K
Sbjct: 144 NGTYLDWACVDTLLK-NLPVLQELHLSLNNYRQVLIDAEEAEQRLQETETPEETERRITK 202
Query: 365 A 363
A
Sbjct: 203 A 203
>AE014135-28|AAN06558.1| 443|Drosophila melanogaster CG32006-PA
protein.
Length = 443
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 260 YDHNDHIVDNLLDIC 216
YD ND I++NLLD+C
Sbjct: 425 YDRNDDILENLLDVC 439
>AE013599-1044|AAM68775.1| 459|Drosophila melanogaster CG12214-PB,
isoform B protein.
Length = 459
Score = 29.5 bits (63), Expect = 6.5
Identities = 31/121 (25%), Positives = 54/121 (44%)
Frame = -1
Query: 725 KMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVL 546
++ EL+ Q++L + E+ I + + N+S N +S + + T LVL
Sbjct: 86 RVRELDLAQNKLSDWSEVF--SILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVL 143
Query: 545 SPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIFK 366
+ L W L K NLP+ H+ + + L + Q+L+ +E P+ R I K
Sbjct: 144 NGTYLDWACVDTLLK-NLPVLQELHLSLNNYRQVLIDAEEAEQRLQETETPEETERRITK 202
Query: 365 A 363
A
Sbjct: 203 A 203
>AE013599-1043|AAF58828.1| 459|Drosophila melanogaster CG12214-PA,
isoform A protein.
Length = 459
Score = 29.5 bits (63), Expect = 6.5
Identities = 31/121 (25%), Positives = 54/121 (44%)
Frame = -1
Query: 725 KMTELETRQDELLNKLEILYERIKTISSQCKLDNMSANIQSSNASKVESVITPEEVVLVL 546
++ EL+ Q++L + E+ I + + N+S N +S + + T LVL
Sbjct: 86 RVRELDLAQNKLSDWSEVF--SILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVL 143
Query: 545 SPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIFK 366
+ L W L K NLP+ H+ + + L + Q+L+ +E P+ R I K
Sbjct: 144 NGTYLDWACVDTLLK-NLPVLQELHLSLNNYRQVLIDAEEAEQRLQETETPEETERRITK 202
Query: 365 A 363
A
Sbjct: 203 A 203
>BT029951-1|ABM92825.1| 415|Drosophila melanogaster IP17244p
protein.
Length = 415
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 519 EYHFEKIQFTNTYNLSCPFISAK*EISKNKGFYSKT 412
EY + F NTY++ P SAK ++ + K YSK+
Sbjct: 210 EYEVDYTLFNNTYDVDTPLCSAK-QLDELKSEYSKS 244
>BT029920-1|ABM92794.1| 535|Drosophila melanogaster IP03029p
protein.
Length = 535
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 519 EYHFEKIQFTNTYNLSCPFISAK*EISKNKGFYSKT 412
EY + F NTY++ P SAK ++ + K YSK+
Sbjct: 330 EYEVDYTLFNNTYDVDTPLCSAK-QLDELKSEYSKS 364
>BT001270-1|AAN71026.1| 623|Drosophila melanogaster AT04551p
protein.
Length = 623
Score = 29.1 bits (62), Expect = 8.6
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = -1
Query: 545 SPDSLPWYLNIILKKSNLPIHTTCHVHSSVPSEKLAKIKAFTQKLKTSENPKVNLRLIFK 366
+P + W LN + +P S VP + TQ S++P+ LRL+
Sbjct: 462 TPPPIDWELNTAPGQVQVPEPVAAPTPSFVPGSVTQPKEDSTQD-NDSDDPE-ELRLLLL 519
Query: 365 AAADSELKLSALSTPILGNVNILRY-LSLAYPTIIPY-DHNDHIVDNLLDICHVLERTSE 192
++ ++ + + + IL+ L P+ +P D + +LD C+VL+ E
Sbjct: 520 SSIATKKRTNGPNPKSGLRPEILKNALKRFQPSELPIKDERSQVQHPILDECNVLKTEKE 579
Query: 191 KNKEAVV 171
KE V
Sbjct: 580 IEKETAV 586
>AY044166-1|AAK98804.1| 422|Drosophila melanogaster potassium
inwardly rectifyingchannel DIR protein.
Length = 422
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 519 EYHFEKIQFTNTYNLSCPFISAK*EISKNKGFYSKT 412
EY + F NTY++ P SAK ++ + K YSK+
Sbjct: 327 EYEVDYTLFNNTYDVDTPLCSAK-QLDELKSEYSKS 361
>AJ344344-1|CAC87637.1| 532|Drosophila melanogaster inwardly
rectifying K+ channelprotein protein.
Length = 532
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 519 EYHFEKIQFTNTYNLSCPFISAK*EISKNKGFYSKT 412
EY + F NTY++ P SAK ++ + K YSK+
Sbjct: 327 EYEVDYTLFNNTYDVDTPLCSAK-QLDELKSEYSKS 361
>AE014297-3286|AAF56107.1| 532|Drosophila melanogaster CG6747-PA
protein.
Length = 532
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 519 EYHFEKIQFTNTYNLSCPFISAK*EISKNKGFYSKT 412
EY + F NTY++ P SAK ++ + K YSK+
Sbjct: 327 EYEVDYTLFNNTYDVDTPLCSAK-QLDELKSEYSKS 361
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,566,988
Number of Sequences: 53049
Number of extensions: 679840
Number of successful extensions: 1787
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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