Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10m04
(549 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006012-1|AAO74695.1| 562|Drosophila melanogaster LD08641p pro... 34 0.11
AE014134-500|AAN10395.1| 562|Drosophila melanogaster CG2991-PC,... 34 0.11
AE014134-499|AAF51190.1| 562|Drosophila melanogaster CG2991-PB,... 34 0.11
AE014134-498|AAF51189.1| 562|Drosophila melanogaster CG2991-PA,... 34 0.11
AY051621-1|AAK93045.1| 611|Drosophila melanogaster GH26702p pro... 31 1.4
AE014296-942|AAF50789.1| 611|Drosophila melanogaster CG4669-PA ... 31 1.4
AY084128-1|AAL89866.1| 285|Drosophila melanogaster RE20756p pro... 28 7.2
AE014134-3370|AAN11106.1| 285|Drosophila melanogaster CG31626-P... 28 7.2
AE014134-3369|AAN11105.1| 285|Drosophila melanogaster CG31626-P... 28 7.2
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 7.2
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro... 28 9.6
BT003608-1|AAO39611.1| 377|Drosophila melanogaster GH19274p pro... 28 9.6
BT003318-1|AAO25078.1| 517|Drosophila melanogaster AT26991p pro... 28 9.6
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro... 28 9.6
BT001317-1|AAN71072.1| 517|Drosophila melanogaster AT15066p pro... 28 9.6
AY052044-1|AAK93468.1| 581|Drosophila melanogaster LP06006p pro... 28 9.6
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB... 28 9.6
AE014296-204|AAN11465.1| 517|Drosophila melanogaster CG9130-PB,... 28 9.6
AE014296-203|AAN11464.1| 517|Drosophila melanogaster CG9130-PA,... 28 9.6
>BT006012-1|AAO74695.1| 562|Drosophila melanogaster LD08641p
protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 342 PNTMYNGIKPTRLWHLTPRKYFDRMIQDKIEVRNGFTQRSKSEQ 211
P ++N + P +LW L PRK R I I N T + E+
Sbjct: 339 PCCLWNSMAPEQLWILNPRKLLSRQIDPSIPTLNAETNKLSPEE 382
>AE014134-500|AAN10395.1| 562|Drosophila melanogaster CG2991-PC,
isoform C protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 342 PNTMYNGIKPTRLWHLTPRKYFDRMIQDKIEVRNGFTQRSKSEQ 211
P ++N + P +LW L PRK R I I N T + E+
Sbjct: 339 PCCLWNSMAPEQLWILNPRKLLSRQIDPSIPTLNAETNKLSPEE 382
>AE014134-499|AAF51190.1| 562|Drosophila melanogaster CG2991-PB,
isoform B protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 342 PNTMYNGIKPTRLWHLTPRKYFDRMIQDKIEVRNGFTQRSKSEQ 211
P ++N + P +LW L PRK R I I N T + E+
Sbjct: 339 PCCLWNSMAPEQLWILNPRKLLSRQIDPSIPTLNAETNKLSPEE 382
>AE014134-498|AAF51189.1| 562|Drosophila melanogaster CG2991-PA,
isoform A protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 342 PNTMYNGIKPTRLWHLTPRKYFDRMIQDKIEVRNGFTQRSKSEQ 211
P ++N + P +LW L PRK R I I N T + E+
Sbjct: 339 PCCLWNSMAPEQLWILNPRKLLSRQIDPSIPTLNAETNKLSPEE 382
>AY051621-1|AAK93045.1| 611|Drosophila melanogaster GH26702p
protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 108 GACDPPKMQ--CPNTPAPAPDKDCPLRPCDK 22
GAC P + Q CP P P P D PL DK
Sbjct: 8 GACCPSRCQPACPPCPPPGPPCDAPLVRLDK 38
>AE014296-942|AAF50789.1| 611|Drosophila melanogaster CG4669-PA
protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 108 GACDPPKMQ--CPNTPAPAPDKDCPLRPCDK 22
GAC P + Q CP P P P D PL DK
Sbjct: 8 GACCPSRCQPACPPCPPPGPPCDAPLVRLDK 38
>AY084128-1|AAL89866.1| 285|Drosophila melanogaster RE20756p
protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -1
Query: 177 LGVAYSYGMFSPEKTLTTIVRPPGACDPPKMQCPNTPAPAPDKDCP 40
LG YSY P T P A PP + + PAPAP P
Sbjct: 23 LGSGYSYN--KPTPTFNIPSAPAPAYLPPVQEVISAPAPAPVYSAP 66
>AE014134-3370|AAN11106.1| 285|Drosophila melanogaster CG31626-PB,
isoform B protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -1
Query: 177 LGVAYSYGMFSPEKTLTTIVRPPGACDPPKMQCPNTPAPAPDKDCP 40
LG YSY P T P A PP + + PAPAP P
Sbjct: 23 LGSGYSYN--KPTPTFNIPSAPAPAYLPPVQEVISAPAPAPVYSAP 66
>AE014134-3369|AAN11105.1| 285|Drosophila melanogaster CG31626-PA,
isoform A protein.
Length = 285
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -1
Query: 177 LGVAYSYGMFSPEKTLTTIVRPPGACDPPKMQCPNTPAPAPDKDCP 40
LG YSY P T P A PP + + PAPAP P
Sbjct: 23 LGSGYSYN--KPTPTFNIPSAPAPAYLPPVQEVISAPAPAPVYSAP 66
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 135 TLTTIVRPPGACDPPKMQCPNTPAPAPDKDCPLRP 31
T + I + PG + P + P+ PAP P + P +P
Sbjct: 18987 TQSPIPQQPGVVNIPSVPSPSYPAPNPPVNYPTQP 19021
>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 114 PPGACDPPKMQCPNTPAPAPDKDCP 40
P + P PNTP+P P ++CP
Sbjct: 510 PTASPTAPPYVLPNTPSPDPREECP 534
>BT003608-1|AAO39611.1| 377|Drosophila melanogaster GH19274p
protein.
Length = 377
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 114 PPGACDPPKM--QCPNTPAPAPDKDCPLRPCD 25
P G C PP CP P+ P P PCD
Sbjct: 109 PCGPCPPPPSCGSCPPPPSCGPPCPPPCDPCD 140
>BT003318-1|AAO25078.1| 517|Drosophila melanogaster AT26991p
protein.
Length = 517
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 114 PPGACDPPKM--QCPNTPAPAPDKDCPLRPCD 25
P G C PP CP P+ P P PCD
Sbjct: 249 PCGPCPPPPSCGSCPPPPSCGPPCPPPCDPCD 280
>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 114 PPGACDPPKMQCPNTPAPAPDKDCP 40
P + P PNTP+P P ++CP
Sbjct: 510 PTASPTAPPYVLPNTPSPDPREECP 534
>BT001317-1|AAN71072.1| 517|Drosophila melanogaster AT15066p
protein.
Length = 517
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 114 PPGACDPPKM--QCPNTPAPAPDKDCPLRPCD 25
P G C PP CP P+ P P PCD
Sbjct: 249 PCGPCPPPPSCGSCPPPPSCGPPCPPPCDPCD 280
>AY052044-1|AAK93468.1| 581|Drosophila melanogaster LP06006p
protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 114 PPGACDPPKMQCPNTPAPAPDKDCP 40
P + P PNTP+P P ++CP
Sbjct: 44 PTASPTAPPYVLPNTPSPDPREECP 68
>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 114 PPGACDPPKMQCPNTPAPAPDKDCP 40
P + P PNTP+P P ++CP
Sbjct: 510 PTASPTAPPYVLPNTPSPDPREECP 534
>AE014296-204|AAN11465.1| 517|Drosophila melanogaster CG9130-PB,
isoform B protein.
Length = 517
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 114 PPGACDPPKM--QCPNTPAPAPDKDCPLRPCD 25
P G C PP CP P+ P P PCD
Sbjct: 249 PCGPCPPPPSCGSCPPPPSCGPPCPPPCDPCD 280
>AE014296-203|AAN11464.1| 517|Drosophila melanogaster CG9130-PA,
isoform A protein.
Length = 517
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = -1
Query: 114 PPGACDPPKM--QCPNTPAPAPDKDCPLRPCD 25
P G C PP CP P+ P P PCD
Sbjct: 249 PCGPCPPPPSCGSCPPPPSCGPPCPPPCDPCD 280
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,594,475
Number of Sequences: 53049
Number of extensions: 604340
Number of successful extensions: 1937
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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