Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10l11
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB020523-1|BAA76752.1| 368|Homo sapiens endonuclease G-like pro... 35 0.25
BC016351-1|AAH16351.1| 297|Homo sapiens endonuclease G protein. 35 0.34
BC004922-1|AAH04922.1| 297|Homo sapiens endonuclease G protein. 35 0.34
AL441992-12|CAI15412.1| 297|Homo sapiens endonuclease G protein. 35 0.34
BC016722-1|AAH16722.1| 230|Homo sapiens FAT3 protein protein. 33 1.0
X79444-1|CAA55963.1| 297|Homo sapiens endonuclease protein. 32 1.8
BC132881-1|AAI32882.1| 599|Homo sapiens ARSJ protein protein. 30 7.3
BC132879-1|AAI32880.1| 599|Homo sapiens ARSJ protein protein. 30 7.3
BC104213-1|AAI04214.1| 228|Homo sapiens ENDOGL1 protein protein. 30 7.3
BC104212-1|AAI04213.1| 228|Homo sapiens ENDOGL1 protein protein. 30 7.3
BC089445-1|AAH89445.1| 578|Homo sapiens ARSJ protein protein. 30 7.3
AY875938-1|AAW66666.1| 599|Homo sapiens arylsulfatase J protein. 30 7.3
AM049401-1|CAJ18095.1| 596|Homo sapiens arylsulfatase J protein. 30 7.3
>AB020523-1|BAA76752.1| 368|Homo sapiens endonuclease G-like
protein-1 protein.
Length = 368
Score = 35.1 bits (77), Expect = 0.25
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = -3
Query: 655 SRGHLAAKTDFVYAFGERA-SFHYVNCAPQWYGFNSGNWNTLEVDLRNRVHAAGYDTVIY 479
SRGH+A + ++ A +F+ N PQ + NSG WN +E+ R ++ V
Sbjct: 137 SRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTER--FEDVWV 194
Query: 478 TGTHGVMELLNSSGSTVDVHLYDDVNNNPLIPVPLYFYKVVYEPSSKRGT 329
G + L + G + Y + + + VP + YKV+ S T
Sbjct: 195 VS--GPLTLPQTRGDGKKIVSYQVIGEDN-VAVPSHLYKVILARRSSVST 241
>BC016351-1|AAH16351.1| 297|Homo sapiens endonuclease G protein.
Length = 297
Score = 34.7 bits (76), Expect = 0.34
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = -3
Query: 694 HAANDYITAESFLSRGHLAAKTDFVYAFGERA---SFHYVNCAPQWYGFNSGNWNTLEVD 524
H A + S RGHLAA + + + ++A +F+ N APQ N WN LE
Sbjct: 125 HRATNADYRGSGFDRGHLAAAAN--HRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKY 182
Query: 523 LRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVHLYDDVNNNPLIPVPLYFYKVV 356
R+ + Y V Y T G + L + Y + N + VP +F+KV+
Sbjct: 183 SRSLTRS--YQNV-YVCT-GPLFLPRTEADGKSYVKYQVIGKNH-VAVPTHFFKVL 233
>BC004922-1|AAH04922.1| 297|Homo sapiens endonuclease G protein.
Length = 297
Score = 34.7 bits (76), Expect = 0.34
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = -3
Query: 694 HAANDYITAESFLSRGHLAAKTDFVYAFGERA---SFHYVNCAPQWYGFNSGNWNTLEVD 524
H A + S RGHLAA + + + ++A +F+ N APQ N WN LE
Sbjct: 125 HRATNADYRGSGFDRGHLAAAAN--HRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKY 182
Query: 523 LRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVHLYDDVNNNPLIPVPLYFYKVV 356
R+ + Y V Y T G + L + Y + N + VP +F+KV+
Sbjct: 183 SRSLTRS--YQNV-YVCT-GPLFLPRTEADGKSYVKYQVIGKNH-VAVPTHFFKVL 233
>AL441992-12|CAI15412.1| 297|Homo sapiens endonuclease G protein.
Length = 297
Score = 34.7 bits (76), Expect = 0.34
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = -3
Query: 694 HAANDYITAESFLSRGHLAAKTDFVYAFGERA---SFHYVNCAPQWYGFNSGNWNTLEVD 524
H A + S RGHLAA + + + ++A +F+ N APQ N WN LE
Sbjct: 125 HRATNADYRGSGFDRGHLAAAAN--HRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKY 182
Query: 523 LRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVHLYDDVNNNPLIPVPLYFYKVV 356
R+ + Y V Y T G + L + Y + N + VP +F+KV+
Sbjct: 183 SRSLTRS--YQNV-YVCT-GPLFLPRTEADGKSYVKYQVIGKNH-VAVPTHFFKVL 233
>BC016722-1|AAH16722.1| 230|Homo sapiens FAT3 protein protein.
Length = 230
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = -3
Query: 526 DLRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVHL-YDDVNNN-PLIPVPLYFYKVVY 353
D+ +R Y +Y GV+ L ST++V++ +DVN+N PL P+Y Y VV
Sbjct: 80 DILDRETMGSYWLTVYATDRGVVPLY----STIEVYIEVEDVNDNAPLTSEPIY-YPVVM 134
Query: 352 EPSSK 338
E S K
Sbjct: 135 ENSPK 139
>X79444-1|CAA55963.1| 297|Homo sapiens endonuclease protein.
Length = 297
Score = 32.3 bits (70), Expect = 1.8
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = -3
Query: 694 HAANDYITAESFLSRGHLAAKTDFVYAFGERA---SFHYVNCAPQWYGFNSGNWNTLEVD 524
H A + S RGHLAA + + + ++A +F+ APQ N WN LE
Sbjct: 125 HRATNADYRGSGFDRGHLAAAAN--HRWSQKAMDDTFYLSKVAPQVPHLNQNAWNNLEKY 182
Query: 523 LRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVHLYDDVNNNPLIPVPLYFYKVV 356
R+ + Y V Y T G + L + Y + N + VP +F+KV+
Sbjct: 183 SRSLTRS--YQNV-YVCT-GPLFLPRTEADGKSYVKYQVIGKNH-VAVPTHFFKVL 233
>BC132881-1|AAI32882.1| 599|Homo sapiens ARSJ protein protein.
Length = 599
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 403 NNNPLIPVPLYF-YKVVYEPSSKRGTAFVGINNPFYSSVSRESVMIFCPDQCANNTQFSW 227
++NP P+ LY Y+ V+ P G F + + R + M+ C D+ NN +
Sbjct: 252 SHNPTKPIFLYIAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAINNVTLAL 311
Query: 226 LTW 218
T+
Sbjct: 312 KTY 314
>BC132879-1|AAI32880.1| 599|Homo sapiens ARSJ protein protein.
Length = 599
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 403 NNNPLIPVPLYF-YKVVYEPSSKRGTAFVGINNPFYSSVSRESVMIFCPDQCANNTQFSW 227
++NP P+ LY Y+ V+ P G F + + R + M+ C D+ NN +
Sbjct: 252 SHNPTKPIFLYIAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAINNVTLAL 311
Query: 226 LTW 218
T+
Sbjct: 312 KTY 314
>BC104213-1|AAI04214.1| 228|Homo sapiens ENDOGL1 protein protein.
Length = 228
Score = 30.3 bits (65), Expect = 7.3
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = -3
Query: 598 SFHYVNCAPQWYGFNSGNWNTLEVDLRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVH 419
+F+ N PQ + NSG WN +E+ R ++ V G + L + G +
Sbjct: 17 TFYLSNIVPQDFDNNSGYWNRIEMYCRELTER--FEDVWVVS--GPLTLPQTRGDGKKIV 72
Query: 418 LYDDVNNNPLIPVPLYFYKVVYEPSSKRGT 329
Y + + + VP + YKV+ S T
Sbjct: 73 SYQVIGEDN-VAVPSHLYKVILARRSSVST 101
>BC104212-1|AAI04213.1| 228|Homo sapiens ENDOGL1 protein protein.
Length = 228
Score = 30.3 bits (65), Expect = 7.3
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = -3
Query: 598 SFHYVNCAPQWYGFNSGNWNTLEVDLRNRVHAAGYDTVIYTGTHGVMELLNSSGSTVDVH 419
+F+ N PQ + NSG WN +E+ R ++ V G + L + G +
Sbjct: 17 TFYLSNIVPQDFDNNSGYWNRIEMYCRELTER--FEDVWVVS--GPLTLPQTRGDGKKIV 72
Query: 418 LYDDVNNNPLIPVPLYFYKVVYEPSSKRGT 329
Y + + + VP + YKV+ S T
Sbjct: 73 SYQVIGEDN-VAVPSHLYKVILARRSSVST 101
>BC089445-1|AAH89445.1| 578|Homo sapiens ARSJ protein protein.
Length = 578
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 403 NNNPLIPVPLYF-YKVVYEPSSKRGTAFVGINNPFYSSVSRESVMIFCPDQCANNTQFSW 227
++NP P+ LY Y+ V+ P G F + + R + M+ C D+ NN +
Sbjct: 252 SHNPTKPIFLYIAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAINNVTLAL 311
Query: 226 LTW 218
T+
Sbjct: 312 KTY 314
>AY875938-1|AAW66666.1| 599|Homo sapiens arylsulfatase J protein.
Length = 599
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 403 NNNPLIPVPLYF-YKVVYEPSSKRGTAFVGINNPFYSSVSRESVMIFCPDQCANNTQFSW 227
++NP P+ LY Y+ V+ P G F + + R + M+ C D+ NN +
Sbjct: 252 SHNPTKPIFLYIAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAINNVTLAL 311
Query: 226 LTW 218
T+
Sbjct: 312 KTY 314
>AM049401-1|CAJ18095.1| 596|Homo sapiens arylsulfatase J protein.
Length = 596
Score = 30.3 bits (65), Expect = 7.3
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = -3
Query: 403 NNNPLIPVPLYF-YKVVYEPSSKRGTAFVGINNPFYSSVSRESVMIFCPDQCANNTQFSW 227
++NP P+ LY Y+ V+ P G F + + R + M+ C D+ NN +
Sbjct: 252 SHNPTKPIFLYIAYQAVHSPLQAPGRYFEHYRSIININRRRYAAMLSCLDEAINNVTLAL 311
Query: 226 LTW 218
T+
Sbjct: 312 KTY 314
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,859,061
Number of Sequences: 237096
Number of extensions: 2118947
Number of successful extensions: 3940
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3940
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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