Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10l11
(720 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 25 0.95
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 25 0.95
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 25 0.95
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 23 2.2
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 2.9
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 21 8.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 8.9
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 8.9
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 8.9
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 8.9
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.6 bits (51), Expect = 0.95
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 277 VMIFCPDQCANNTQFSWLTW 218
++ FCPD C ++ ++TW
Sbjct: 349 IVPFCPDCCPSDRMVYFITW 368
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.6 bits (51), Expect = 0.95
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 277 VMIFCPDQCANNTQFSWLTW 218
++ FCPD C ++ ++TW
Sbjct: 349 IVPFCPDCCPSDRMVYFITW 368
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 24.6 bits (51), Expect = 0.95
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 277 VMIFCPDQCANNTQFSWLTW 218
++ FCPD C ++ ++TW
Sbjct: 349 IVPFCPDCCPSDRMVYFITW 368
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 87 QISRSTQC*LNNPVTSNGGKCGMTCL 164
+I + T+C N T GGK ++CL
Sbjct: 558 RIRQVTKCKATNEETYRGGKGALSCL 583
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 87 QISRSTQC*LNNPVTSNGGKCGMTCL 164
+I + T+C N T GGK ++CL
Sbjct: 558 RIRQVTKCKATNEETYRGGKGALSCL 583
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 87 QISRSTQC*LNNPVTSNGGKCGMTCL 164
+I + T+C N T GGK ++CL
Sbjct: 558 RIRQVTKCKATNEETYRGGKGALSCL 583
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 524 IHFQSVPISAIETIPLRGAVDI 589
IH SVP++ I I L+ +DI
Sbjct: 70 IHIGSVPVNNINLILLQNIIDI 91
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 99 CDLFGSEFNLNWVLKMY 49
CD+ G F N VLK++
Sbjct: 234 CDICGKSFGYNHVLKLH 250
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 118 TIRSLRMVVNVE*LA*SAPPCSRSRFPQILF*DSKSTMKIG 240
T+ +++V V + + PP S +RF +I S KIG
Sbjct: 69 TLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 109
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 717 LLENVSADTPPMTTLP 670
L+EN+ A+ P +TLP
Sbjct: 82 LVENLQANEKPWSTLP 97
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 717 LLENVSADTPPMTTLP 670
L+EN+ A+ P +TLP
Sbjct: 120 LVENLQANEKPWSTLP 135
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 118 TIRSLRMVVNVE*LA*SAPPCSRSRFPQILF*DSKSTMKIG 240
T+ +++V V + + PP S +RF +I S KIG
Sbjct: 85 TLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 125
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 118 TIRSLRMVVNVE*LA*SAPPCSRSRFPQILF*DSKSTMKIG 240
T+ +++V V + + PP S +RF +I S KIG
Sbjct: 142 TLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIG 182
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,110
Number of Sequences: 438
Number of extensions: 4166
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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