Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10l04
(857 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 440 e-124
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 438 e-123
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 436 e-123
03_01_0034 + 318432-318825,318902-319851 436 e-123
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 436 e-123
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 436 e-123
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 436 e-122
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 428 e-120
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 226 2e-59
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 223 1e-58
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 222 3e-58
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 213 2e-55
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 130 1e-30
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 36 0.041
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192... 29 3.6
05_02_0011 - 5570990-5571389,5572378-5572560,5572568-5572818 29 3.6
12_02_1122 - 26244667-26245299 29 4.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 440 bits (1085), Expect = e-124
Identities = 197/259 (76%), Positives = 232/259 (89%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TPT+GDLNHL+S
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLIS 230
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 290
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ+LNVQ KN +FVEWIPNNV+
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPPRG+KM+ATF+GN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 351 SSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL++EYQQYQDAT
Sbjct: 411 AESNMNDLVAEYQQYQDAT 429
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 438 bits (1078), Expect = e-123
Identities = 196/259 (75%), Positives = 231/259 (89%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TPT+GDLNHL+S
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLIS 230
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 290
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ+LNVQ KN +FVEWIPNNV+
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPP G+KM++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 351 SSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL++EYQQYQDAT
Sbjct: 411 AESNMNDLVAEYQQYQDAT 429
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 436 bits (1075), Expect = e-123
Identities = 196/259 (75%), Positives = 231/259 (89%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TPT+GDLNHL+S
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLIS 230
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 290
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ+LNVQ KN +FVEWIPNNV+
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPP G+KM++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 351 SSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL++EYQQYQDAT
Sbjct: 411 AESNMNDLVAEYQQYQDAT 429
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 436 bits (1075), Expect = e-123
Identities = 196/259 (75%), Positives = 230/259 (88%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TP++GDLNHL+S
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 290
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ+LNVQ KN +FVEWIPNNV+
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVK 350
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
+ VCDIPP G+KM++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 351 STVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL+SEYQQYQDAT
Sbjct: 411 AESNMNDLVSEYQQYQDAT 429
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 436 bits (1075), Expect = e-123
Identities = 195/259 (75%), Positives = 231/259 (89%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TP++GDLNHL+S
Sbjct: 192 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 251
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 252 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 311
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ++NVQ KN +FVEWIPNNV+
Sbjct: 312 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 371
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPPRG+ M++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 372 SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 431
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL+SEYQQYQDAT
Sbjct: 432 AESNMNDLVSEYQQYQDAT 450
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 436 bits (1075), Expect = e-123
Identities = 195/259 (75%), Positives = 231/259 (89%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TP++GDLNHL+S
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 230
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 231 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 290
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ++NVQ KN +FVEWIPNNV+
Sbjct: 291 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 350
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPPRG+ M++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 351 SSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL+SEYQQYQDAT
Sbjct: 411 AESNMNDLVSEYQQYQDAT 429
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 436 bits (1074), Expect = e-122
Identities = 194/259 (74%), Positives = 231/259 (89%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL TP++GDLNHL+S
Sbjct: 351 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 410
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 411 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 470
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRG+MS KE+DEQ++NVQ KN +FVEWIPNNV+
Sbjct: 471 QQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 530
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPPRG+ M++TF+GN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F E
Sbjct: 531 SSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 590
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL+SEYQQYQDAT
Sbjct: 591 AESNMNDLVSEYQQYQDAT 609
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 428 bits (1055), Expect = e-120
Identities = 191/259 (73%), Positives = 228/259 (88%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VSDTV EPYNATLSV+QL+EN+ + +DNEALY IC RTLKL P++GDLNHL+S
Sbjct: 187 PSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLIS 246
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
TMSGVT CLRFPGQLN+DLRKLAVN+IPFPRLHFFM GFAPLTSR SQQYRALTVPELT
Sbjct: 247 ATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELT 306
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
QQM+DAKNMM A DP GRYLT + +FRGRMS KE+DEQ++NVQ KN +FVEWIPNNV+
Sbjct: 307 QQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 366
Query: 315 TAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAE 136
++VCDIPP G+ M++TF+GN+T+IQE+F+R+SEQF AMF RKAFLHWYT EGM+E +F E
Sbjct: 367 SSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTE 426
Query: 135 ADNNVSDLLSEYQQYQDAT 79
A++N++DL++EYQQYQDAT
Sbjct: 427 AESNMNDLVAEYQQYQDAT 445
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 226 bits (553), Expect = 2e-59
Identities = 99/262 (37%), Positives = 162/262 (61%), Gaps = 8/262 (3%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VS V EPYN+ LS + L+E++ + +DNEA+Y IC R+L + PTY +LN L+S
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
+S +TT LRF G +N D+ + N++P+PR+HF + +AP+ S + L+VPE+T
Sbjct: 233 QIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEIT 292
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
+F+ +MMA CDP G+Y+ ++RG + K+++ + ++ K FV+W P +
Sbjct: 293 NAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFK 352
Query: 315 TAVCDIPP--------RGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEG 160
+ PP ++ + I N TA+ E+F RI +F M++++AF+HWY GEG
Sbjct: 353 CGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEG 412
Query: 159 MEEGDFAEADNNVSDLLSEYQQ 94
MEEG+F+EA +++ L +Y++
Sbjct: 413 MEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 223 bits (545), Expect = 1e-58
Identities = 99/262 (37%), Positives = 161/262 (61%), Gaps = 8/262 (3%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VS +V EPYN+ LS + L+E++ + +DNEA+Y IC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVS 232
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
+S +T LRF G LN D+ + N++P+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
F+ +MMA CDP G+Y+ ++RG + K+++ + ++ K FV+W P +
Sbjct: 293 NSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFK 352
Query: 315 TAVCDIPP--------RGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEG 160
+ PP ++ + I N+T++ E+F RI +F M+S++AF+HWY GEG
Sbjct: 353 CGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEG 412
Query: 159 MEEGDFAEADNNVSDLLSEYQQ 94
MEEG+F+EA +++ L +Y++
Sbjct: 413 MEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 222 bits (542), Expect = 3e-58
Identities = 99/262 (37%), Positives = 161/262 (61%), Gaps = 8/262 (3%)
Frame = -3
Query: 855 PSPTVSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVS 676
PSP VS +V EPYN+ LS + L+E++ + +DNEA+Y IC R+L + PTY +LN LVS
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVS 232
Query: 675 LTMSGVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELT 496
+S +T LRF G LN D+ + N++P+PR+HF + +AP+ S + L+V E+T
Sbjct: 233 QVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEIT 292
Query: 495 QQMFDAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQ 316
F+ +MMA CDP G+Y+ ++RG + K+++ + ++ K FV+W P +
Sbjct: 293 NSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFK 352
Query: 315 TAVCDIPP--------RGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEG 160
+ PP ++ + I N+T++ E+F RI +F M+S++AF+HWY GEG
Sbjct: 353 CGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEG 412
Query: 159 MEEGDFAEADNNVSDLLSEYQQ 94
MEEG+F+EA +++ L +Y++
Sbjct: 413 MEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 213 bits (520), Expect = 2e-55
Identities = 93/258 (36%), Positives = 158/258 (61%), Gaps = 8/258 (3%)
Frame = -3
Query: 843 VSDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVSLTMS 664
+S V EPYN+ LS + LIE++ +DNEA+Y IC R+L + PTY +LN L+S +S
Sbjct: 258 ISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVIS 317
Query: 663 GVTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLTSRNSQQYRALTVPELTQQMF 484
+TT LRF G +N D+ + N++P+PR+HF + +AP+ S + +VPE+T +F
Sbjct: 318 SLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVF 377
Query: 483 DAKNMMAACDPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNVQTAVC 304
+ ++MA CDP G+Y+ ++RG + K+++ + +++ + FV+W P + +
Sbjct: 378 EPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGIN 437
Query: 303 DIPPRG--------MKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEG 148
PP ++ + I N TA+ E+F RI +F M++++AF+HWY GEGMEEG
Sbjct: 438 YQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEG 497
Query: 147 DFAEADNNVSDLLSEYQQ 94
+F+EA +++ L +Y++
Sbjct: 498 EFSEAREDLAALEKDYEE 515
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 130 bits (315), Expect = 1e-30
Identities = 78/258 (30%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
Frame = -3
Query: 840 SDTVXEPYNATLSVNQLIENSIQSYCIDNEALYYICHRTLKLMTPTYGDLNHLVSLTMSG 661
SD V +PYN+ L++ +L N+ +DN AL I L L PT+ N LVS MS
Sbjct: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSA 238
Query: 660 VTTCLRFPGQLNADLRKLAVNMIPFPRLHFFMPGFAPLT-SRNSQQYRALTVPELTQQMF 484
TT LR+PG +N DL L ++IP PR HF M G+ PLT R R TV ++ +++
Sbjct: 239 STTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLL 298
Query: 483 DAKNMMAAC-----DPHRGRYLTVATVFRGRMSMKEIDEQILNVQKKNKDFFVEWIPNNV 319
KN+M + + + +Y+++ + +G + ++ E + ++++ F+EW P ++
Sbjct: 299 QTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASI 358
Query: 318 QTAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGM-EEGDF 142
Q +S + N T+I+ +F + Q+ + ++AFL Y M E+ D
Sbjct: 359 Q------------VSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 406
Query: 141 AEADNN---VSDLLSEYQ 97
+E D + + L+ EY+
Sbjct: 407 SEFDESREIIESLVDEYK 424
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 35.9 bits (79), Expect = 0.041
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 224 ILLKISWIAVVFPMNVADIFIPLGGMSQTAVCTLFGIHSTKKSLFFFCTLRICSSISFID 403
+L+ + VV + +FI + G V TLFG+H K+ FC+L + I D
Sbjct: 1641 LLIALGVFVVVLVVEKHSVFIVVHGYGNHGVRTLFGMHRVGKTPVLFCSLHNSNCIRLFD 1700
Query: 404 I 406
+
Sbjct: 1701 L 1701
>10_01_0171 +
1917520-1918056,1919201-1919336,1921873-1922060,
1922491-1922694,1923913-1924425
Length = 525
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 593 IILTANFRRSALSCPGNRRHVVTPDIVKDTRWFRSPYVGVMSFN 724
II+ RRS + C G + + P I K R FR P + + + N
Sbjct: 265 IIVILILRRSGIICIGALKEIFKPPIFKHERSFRPPVLRIENGN 308
>05_02_0011 - 5570990-5571389,5572378-5572560,5572568-5572818
Length = 277
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -2
Query: 604 GQYDTLSEAALLYARLCTADVKK*SAVPRSHGTR-INTTNVRRKEYDGGL*SSPRSLSHC 428
G L E LY RL VK R+ R I TN+RR+ Y G + + H
Sbjct: 161 GSAPALPETRRLYRRLLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWMELLLKPAVHA 220
Query: 427 SHRLPGKNV 401
+ L G V
Sbjct: 221 AGELQGSAV 229
>12_02_1122 - 26244667-26245299
Length = 210
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 576 HFFMPGFAPLTSRNSQQYRALTVPELTQQMFDAKNMMA--ACDPHRGRYLTVATV 418
H ++P + + A+ VP++ + MA +C PH+G ++T A +
Sbjct: 106 HLYLPAGVAAATTTTTTTTAMAVPDMVGMPTHQMSSMALHSCRPHQGSHVTAADI 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,042,095
Number of Sequences: 37544
Number of extensions: 470090
Number of successful extensions: 1127
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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