Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10l02
(797 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021391-1|AAX33539.1| 443|Drosophila melanogaster LD18146p pro... 173 2e-43
AY094882-1|AAM11235.1| 443|Drosophila melanogaster RE51891p pro... 173 2e-43
AY071492-1|AAL49114.1| 443|Drosophila melanogaster RE55688p pro... 173 2e-43
AE013599-2000|AAF58175.1| 463|Drosophila melanogaster CG7639-PA... 173 2e-43
AE013599-1999|AAS64850.1| 443|Drosophila melanogaster CG7639-PB... 173 2e-43
AY071480-1|AAL49102.1| 204|Drosophila melanogaster RE55091p pro... 33 0.60
BT003550-1|AAO39554.1| 591|Drosophila melanogaster RE01835p pro... 32 0.79
AE014297-3043|AAF55921.2| 591|Drosophila melanogaster CG6703-PA... 32 0.79
BT011185-1|AAR88546.1| 542|Drosophila melanogaster RE10280p pro... 31 2.4
BT001676-1|AAN71431.1| 566|Drosophila melanogaster RE54188p pro... 30 3.2
AY122065-1|AAM52577.1| 1124|Drosophila melanogaster AT07927p pro... 30 3.2
AF079764-1|AAC64271.1| 2023|Drosophila melanogaster enhancer of ... 30 3.2
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 30 3.2
AE014134-3581|AAX52677.1| 566|Drosophila melanogaster CG1832-PB... 30 3.2
AE014134-3169|AAS64723.1| 1124|Drosophila melanogaster CG33316-P... 30 3.2
AE014134-3168|AAS64722.1| 1249|Drosophila melanogaster CG33316-P... 30 3.2
AE013599-1314|AAM68743.1| 2023|Drosophila melanogaster CG7776-PB... 30 3.2
AE013599-1313|AAF58641.1| 2023|Drosophila melanogaster CG7776-PA... 30 3.2
BT011110-1|AAR82777.1| 1777|Drosophila melanogaster LD32107p pro... 29 7.4
AE014298-1311|AAF46472.2| 1837|Drosophila melanogaster CG12124-P... 29 7.4
AE013599-527|AAF59178.2| 897|Drosophila melanogaster CG30377-PA... 29 9.7
>BT021391-1|AAX33539.1| 443|Drosophila melanogaster LD18146p
protein.
Length = 443
Score = 173 bits (421), Expect = 2e-43
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Frame = -3
Query: 789 HNLQWEGLVRETAALSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSS 610
H+LQ+E +R+ L+K+ F +R+ GP++ S+LR+ V D+RD +FP++G +++ +
Sbjct: 210 HSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDGNVFPTRGIYLKSVN 269
Query: 609 ELAGLGGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFGT---EIPDHFFLGGPT 439
E GLGG VA+ + + N L +V Q GV+ + T I F+ GGP
Sbjct: 270 EYCGLGGNVAYTSSTAHGELNVPLFAGLVAQFCARVGVVKETKNTTQLPISSLFYCGGPL 329
Query: 438 TLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGCLA 259
TLRGF+ G GP + G + +W GAH++APLPF ++S FR HFF N G
Sbjct: 330 TLRGFKFGGAGPVVESTPIGAQSFWCTGAHLWAPLPFAGVFKNLASHFRMHFFYNIG--- 386
Query: 258 APDNGLTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQFGLGVH 79
+N + E + R + G G+A++L AR+ELNYC P++ + D +G QFG+G
Sbjct: 387 --NNNSFSTE---NMRSAFGMGLAVKLAERARIELNYCVPVRHQDTDRILNGFQFGIGYE 441
Query: 78 FL 73
F+
Sbjct: 442 FV 443
>AY094882-1|AAM11235.1| 443|Drosophila melanogaster RE51891p
protein.
Length = 443
Score = 173 bits (421), Expect = 2e-43
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Frame = -3
Query: 789 HNLQWEGLVRETAALSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSS 610
H+LQ+E +R+ L+K+ F +R+ GP++ S+LR+ V D+RD +FP++G +++ +
Sbjct: 210 HSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDGNVFPTRGIYLKSVN 269
Query: 609 ELAGLGGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFGT---EIPDHFFLGGPT 439
E GLGG VA+ + + N L +V Q GV+ + T I F+ GGP
Sbjct: 270 EYCGLGGNVAYTSSTAHGELNVPLFAGLVAQFCARVGVVKETKNTTQLPISSLFYCGGPL 329
Query: 438 TLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGCLA 259
TLRGF+ G GP + G + +W GAH++APLPF ++S FR HFF N G
Sbjct: 330 TLRGFKFGGAGPVVESTPIGAQSFWCTGAHLWAPLPFAGVFKNLASHFRMHFFYNIG--- 386
Query: 258 APDNGLTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQFGLGVH 79
+N + E + R + G G+A++L AR+ELNYC P++ + D +G QFG+G
Sbjct: 387 --NNNSFSTE---NMRSAFGMGLAVKLAERARIELNYCVPVRHQDTDRILNGFQFGIGYE 441
Query: 78 FL 73
F+
Sbjct: 442 FV 443
>AY071492-1|AAL49114.1| 443|Drosophila melanogaster RE55688p
protein.
Length = 443
Score = 173 bits (421), Expect = 2e-43
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Frame = -3
Query: 789 HNLQWEGLVRETAALSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSS 610
H+LQ+E +R+ L+K+ F +R+ GP++ S+LR+ V D+RD +FP++G +++ +
Sbjct: 210 HSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDGNVFPTRGIYLKSVN 269
Query: 609 ELAGLGGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFGT---EIPDHFFLGGPT 439
E GLGG VA+ + + N L +V Q GV+ + T I F+ GGP
Sbjct: 270 EYCGLGGNVAYTSSTAHGELNVPLFAGLVAQFCARVGVVKETKNTTQLPISSLFYCGGPL 329
Query: 438 TLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGCLA 259
TLRGF+ G GP + G + +W GAH++APLPF ++S FR HFF N G
Sbjct: 330 TLRGFKFGGAGPVVESTPIGAQSFWCTGAHLWAPLPFAGVFKNLASHFRMHFFYNIG--- 386
Query: 258 APDNGLTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQFGLGVH 79
+N + E + R + G G+A++L AR+ELNYC P++ + D +G QFG+G
Sbjct: 387 --NNNSFSTE---NMRSAFGMGLAVKLAERARIELNYCVPVRHQDTDRILNGFQFGIGYE 441
Query: 78 FL 73
F+
Sbjct: 442 FV 443
>AE013599-2000|AAF58175.1| 463|Drosophila melanogaster CG7639-PA,
isoform A protein.
Length = 463
Score = 173 bits (421), Expect = 2e-43
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Frame = -3
Query: 789 HNLQWEGLVRETAALSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSS 610
H+LQ+E +R+ L+K+ F +R+ GP++ S+LR+ V D+RD +FP++G +++ +
Sbjct: 230 HSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDGNVFPTRGIYLKSVN 289
Query: 609 ELAGLGGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFGT---EIPDHFFLGGPT 439
E GLGG VA+ + + N L +V Q GV+ + T I F+ GGP
Sbjct: 290 EYCGLGGNVAYTSSTAHGELNVPLFAGLVAQFCARVGVVKETKNTTQLPISSLFYCGGPL 349
Query: 438 TLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGCLA 259
TLRGF+ G GP + G + +W GAH++APLPF ++S FR HFF N G
Sbjct: 350 TLRGFKFGGAGPVVESTPIGAQSFWCTGAHLWAPLPFAGVFKNLASHFRMHFFYNIG--- 406
Query: 258 APDNGLTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQFGLGVH 79
+N + E + R + G G+A++L AR+ELNYC P++ + D +G QFG+G
Sbjct: 407 --NNNSFSTE---NMRSAFGMGLAVKLAERARIELNYCVPVRHQDTDRILNGFQFGIGYE 461
Query: 78 FL 73
F+
Sbjct: 462 FV 463
>AE013599-1999|AAS64850.1| 443|Drosophila melanogaster CG7639-PB,
isoform B protein.
Length = 443
Score = 173 bits (421), Expect = 2e-43
Identities = 88/242 (36%), Positives = 137/242 (56%), Gaps = 3/242 (1%)
Frame = -3
Query: 789 HNLQWEGLVRETAALSKTTSFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSS 610
H+LQ+E +R+ L+K+ F +R+ GP++ S+LR+ V D+RD +FP++G +++ +
Sbjct: 210 HSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDGNVFPTRGIYLKSVN 269
Query: 609 ELAGLGGGVAHLKTELQAQQNYELIEDIVLQLAGAAGVLHDMFGT---EIPDHFFLGGPT 439
E GLGG VA+ + + N L +V Q GV+ + T I F+ GGP
Sbjct: 270 EYCGLGGNVAYTSSTAHGELNVPLFAGLVAQFCARVGVVKETKNTTQLPISSLFYCGGPL 329
Query: 438 TLRGFQQRGVGPHSDGQATGGKVYWAAGAHVYAPLPFLRNKNGISSLFRSHFFVNAGCLA 259
TLRGF+ G GP + G + +W GAH++APLPF ++S FR HFF N G
Sbjct: 330 TLRGFKFGGAGPVVESTPIGAQSFWCTGAHLWAPLPFAGVFKNLASHFRMHFFYNIG--- 386
Query: 258 APDNGLTNWEWANSARVSCGAGVALRLGSVARLELNYCAPLKARTNDCTAHGLQFGLGVH 79
+N + E + R + G G+A++L AR+ELNYC P++ + D +G QFG+G
Sbjct: 387 --NNNSFSTE---NMRSAFGMGLAVKLAERARIELNYCVPVRHQDTDRILNGFQFGIGYE 441
Query: 78 FL 73
F+
Sbjct: 442 FV 443
>AY071480-1|AAL49102.1| 204|Drosophila melanogaster RE55091p
protein.
Length = 204
Score = 32.7 bits (71), Expect = 0.60
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 350 CAPAAQYTFPPVACPSECGPTPRCWKPLSVVGPPRKK*SGISVPNMSCRTPAAPASCNTM 529
C AA P A P+ P PR LS PRK+ P R P +P +
Sbjct: 108 CTSAAPVVMPAEAGPATLHPLPRL---LSRPRSPRKR-----SPRRRNRPPRSPPPLRRL 159
Query: 530 SSINS*FCCAWSSVLRW-ATPPP 595
S + + AW+ + RW A P P
Sbjct: 160 PSTSVAWIYAWARLWRWVAIPTP 182
>BT003550-1|AAO39554.1| 591|Drosophila melanogaster RE01835p
protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.79
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 464 SGISVPNMSCRTPAAPASCNTMSSINS*FCCAWSSVLRWATPPPNPASSLLN-CTQEP*L 640
SG SVP C A A M S C + S + + PPP PA L N C+ L
Sbjct: 38 SGQSVPQ--CPAAVAAADAAMMGSNAGGHCRSLSGLSSISIPPPPPA--LFNPCSSALSL 93
Query: 641 GKIASSRWSTVTMC 682
+ A +RW T C
Sbjct: 94 QQAAVTRWGPRTSC 107
>AE014297-3043|AAF55921.2| 591|Drosophila melanogaster CG6703-PA,
isoform A protein.
Length = 591
Score = 32.3 bits (70), Expect = 0.79
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 464 SGISVPNMSCRTPAAPASCNTMSSINS*FCCAWSSVLRWATPPPNPASSLLN-CTQEP*L 640
SG SVP C A A M S C + S + + PPP PA L N C+ L
Sbjct: 38 SGQSVPQ--CPAAVAAADAAMMGSNAGGHCRSLSGLSSISIPPPPPA--LFNPCSSALSL 93
Query: 641 GKIASSRWSTVTMC 682
+ A +RW T C
Sbjct: 94 QQAAVTRWGPRTSC 107
>BT011185-1|AAR88546.1| 542|Drosophila melanogaster RE10280p
protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.4
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +2
Query: 83 TPSPNWRPCAVQSLVRAFSGAQ*FSSSRATLPSRSATPAPHDTRAEFAHSQFVKPLSGAA 262
TPSP P + QS A AQ S+ + +A + HD+ F H+Q+ + + A
Sbjct: 417 TPSPPITPMSPQSAAAAAHAAQSAQSAHHSAAHSAAYMSNHDS-YNFWHNQYQQYPNNYA 475
Query: 263 RQPAFTKKCD--RNRDEIPFLFRRKGSGA--YTCAPAAQYT 373
+ P++ + + N++++ + G A + +P+ +T
Sbjct: 476 QAPSYYSQMEYFSNQNQVNYNMGHSGYTASNFGLSPSPSFT 516
>BT001676-1|AAN71431.1| 566|Drosophila melanogaster RE54188p
protein.
Length = 566
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 434 SVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FCCAWS 565
S VG K+ + +SCR P+ P SCN + S + WS
Sbjct: 339 SGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWS 382
>AY122065-1|AAM52577.1| 1124|Drosophila melanogaster AT07927p
protein.
Length = 1124
Score = 30.3 bits (65), Expect = 3.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 768 LVRETAALSKTT---SFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSSELAG 598
LVR + K T S K S KS L+ + P + ++ +S+L
Sbjct: 239 LVRAVGGVEKNTPKTSSKSSLHSKSDSKSSLKAPQLLQSPSSGGLPKPIAAIKGTSKLPS 298
Query: 597 LGGGVAHLKTELQAQQNYELIE 532
LGGG HL ++QQN +L++
Sbjct: 299 LGGGAGHLPA-AESQQNQQLLK 319
>AF079764-1|AAC64271.1| 2023|Drosophila melanogaster enhancer of
polycomb protein.
Length = 2023
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 182 RSATPAPHDTRAEFAHSQFVKPLSGAARQPAFTKKCDRNRDEIPFLFRRKGSGAYTCAPA 361
+SA+PA +D+ A+ + GA Q K + +E PF FRR+ S Y
Sbjct: 416 QSASPAANDSIADSEEEDYF----GAGAQNG-NKLGSESEEETPFAFRRRSSCVYLPTRQ 470
Query: 362 AQYTFPPVACPSECGPTPRC 421
+P + + P+ C
Sbjct: 471 RDGRYPWDSADEDMAPSGAC 490
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +2
Query: 356 PAAQYTFPPVACPSECGPTPRCWKPLSVVG---PPRKK*SGISVPNMSCRTPAAPAS 517
P+++Y PP + PS PR P S G PP + P+ S PAAP+S
Sbjct: 266 PSSKYG-PPKSAPSSSYGAPRPAAPSSSYGAPAPPSSSYGAPAAPSSSYGAPAAPSS 321
>AE014134-3581|AAX52677.1| 566|Drosophila melanogaster CG1832-PB,
isoform B protein.
Length = 566
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 434 SVVGPPRKK*SGISVPNMSCRTPAAPASCNTMSSINS*FCCAWS 565
S VG K+ + +SCR P+ P SCN + S + WS
Sbjct: 339 SGVGGSVKQSVTVKTECLSCRNPSKPFSCNICGGLFSRYSSLWS 382
>AE014134-3169|AAS64723.1| 1124|Drosophila melanogaster CG33316-PB,
isoform B protein.
Length = 1124
Score = 30.3 bits (65), Expect = 3.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 768 LVRETAALSKTT---SFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSSELAG 598
LVR + K T S K S KS L+ + P + ++ +S+L
Sbjct: 239 LVRAVGGVEKNTPKTSSKSSLHSKSDSKSSLKAPQLLQSPSSGGLPKPIAAIKGTSKLPS 298
Query: 597 LGGGVAHLKTELQAQQNYELIE 532
LGGG HL ++QQN +L++
Sbjct: 299 LGGGAGHLPA-AESQQNQQLLK 319
>AE014134-3168|AAS64722.1| 1249|Drosophila melanogaster CG33316-PA,
isoform A protein.
Length = 1249
Score = 30.3 bits (65), Expect = 3.2
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 768 LVRETAALSKTT---SFKVRESSGPQMKSILRHIVTVDHRDDAIFPSQGSWVQFSSELAG 598
LVR + K T S K S KS L+ + P + ++ +S+L
Sbjct: 364 LVRAVGGVEKNTPKTSSKSSLHSKSDSKSSLKAPQLLQSPSSGGLPKPIAAIKGTSKLPS 423
Query: 597 LGGGVAHLKTELQAQQNYELIE 532
LGGG HL ++QQN +L++
Sbjct: 424 LGGGAGHLPA-AESQQNQQLLK 444
>AE013599-1314|AAM68743.1| 2023|Drosophila melanogaster CG7776-PB,
isoform B protein.
Length = 2023
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 182 RSATPAPHDTRAEFAHSQFVKPLSGAARQPAFTKKCDRNRDEIPFLFRRKGSGAYTCAPA 361
+SA+PA +D+ A+ + GA Q K + +E PF FRR+ S Y
Sbjct: 416 QSASPAANDSIADSEEEDYF----GAGAQNG-NKLGSESEEETPFAFRRRSSCVYLPTRQ 470
Query: 362 AQYTFPPVACPSECGPTPRC 421
+P + + P+ C
Sbjct: 471 RDGRYPWDSADEDMAPSGAC 490
>AE013599-1313|AAF58641.1| 2023|Drosophila melanogaster CG7776-PA,
isoform A protein.
Length = 2023
Score = 30.3 bits (65), Expect = 3.2
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +2
Query: 182 RSATPAPHDTRAEFAHSQFVKPLSGAARQPAFTKKCDRNRDEIPFLFRRKGSGAYTCAPA 361
+SA+PA +D+ A+ + GA Q K + +E PF FRR+ S Y
Sbjct: 416 QSASPAANDSIADSEEEDYF----GAGAQNG-NKLGSESEEETPFAFRRRSSCVYLPTRQ 470
Query: 362 AQYTFPPVACPSECGPTPRC 421
+P + + P+ C
Sbjct: 471 RDGRYPWDSADEDMAPSGAC 490
>BT011110-1|AAR82777.1| 1777|Drosophila melanogaster LD32107p
protein.
Length = 1777
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 127 DQRLHRARPPVRARSALLVESLIVKSKQHQRRTLSIK 17
+Q + RA PP A SA V L+ K+ Q+R ++K
Sbjct: 590 NQTVIRAHPPAAAPSAAPVPPLVATPKRKQKRQAAVK 626
>AE014298-1311|AAF46472.2| 1837|Drosophila melanogaster CG12124-PA
protein.
Length = 1837
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 127 DQRLHRARPPVRARSALLVESLIVKSKQHQRRTLSIK 17
+Q + RA PP A SA V L+ K+ Q+R ++K
Sbjct: 650 NQTVIRAHPPAAAPSAAPVPPLVATPKRKQKRQAAVK 686
>AE013599-527|AAF59178.2| 897|Drosophila melanogaster CG30377-PA
protein.
Length = 897
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 47 LRLHNQTFYKKCTPSPNWRPCAVQSLVRAFSGAQ*FSSSRATLPS--RSATPAPHDT 211
L + Q +C PN++ +S+ F A+ + S T S RSATP+P T
Sbjct: 667 LSVREQIMTIRCASDPNFK-MKRKSIAEIFPAAECYVESEVTTTSLSRSATPSPAST 722
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,139,690
Number of Sequences: 53049
Number of extensions: 796851
Number of successful extensions: 2664
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2647
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -