Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k24
(756 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312) p... 217 3e-56
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 217 3e-56
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 217 3e-56
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 217 3e-56
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 217 3e-56
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 217 3e-56
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 214 3e-55
M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembr... 32 1.9
BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting... 32 1.9
BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific ... 32 1.9
BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific ... 32 1.9
BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific ... 32 1.9
AK223602-1|BAD97322.1| 681|Homo sapiens growth arrest-specific ... 32 1.9
AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting... 32 1.9
AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens ... 32 1.9
AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subuni... 32 1.9
AL832450-1|CAD38626.1| 217|Homo sapiens hypothetical protein pr... 31 3.4
X62949-1|CAA44721.1| 511|Homo sapiens vacuolar isoform 2 of H+A... 31 4.5
M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein. 31 4.5
L35249-1|AAA58661.1| 511|Homo sapiens vacuolar H+-ATPase 56,000... 31 4.5
BC007309-1|AAH07309.1| 501|Homo sapiens ATP6V1B2 protein protein. 31 4.5
BC003100-1|AAH03100.1| 511|Homo sapiens ATPase, H+ transporting... 31 4.5
Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein. 31 5.9
X14474-1|CAA32636.1| 383|Homo sapiens protein ( Human mRNA for ... 31 5.9
J03778-1|AAA60615.1| 352|Homo sapiens MTBT1 protein. 31 5.9
BT006772-1|AAP35418.1| 352|Homo sapiens microtubule-associated ... 31 5.9
BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subuni... 31 5.9
BC114948-1|AAI14949.1| 383|Homo sapiens microtubule-associated ... 31 5.9
BC114504-1|AAI14505.1| 352|Homo sapiens microtubule-associated ... 31 5.9
BC101936-1|AAI01937.1| 352|Homo sapiens microtubule-associated ... 31 5.9
BC099721-1|AAH99721.1| 352|Homo sapiens microtubule-associated ... 31 5.9
BC098281-1|AAH98281.1| 352|Homo sapiens microtubule-associated ... 31 5.9
BC030640-1|AAH30640.1| 511|Homo sapiens ATPase, H+ transporting... 31 5.9
BC000558-1|AAH00558.1| 352|Homo sapiens microtubule-associated ... 31 5.9
AY730549-1|AAU45390.1| 412|Homo sapiens microtubule-associated ... 31 5.9
AY526356-1|AAS17881.1| 244|Homo sapiens microtubule-associated ... 31 5.9
AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D receptor-inte... 31 5.9
AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone recepto... 31 5.9
AF047863-3|AAC04278.1| 352|Homo sapiens CNS specific microtubul... 31 5.9
AF047863-2|AAC04279.1| 441|Homo sapiens CNS specific microtubul... 31 5.9
AF047863-1|AAC04277.1| 758|Homo sapiens PNS specific microtubul... 31 5.9
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 7.8
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor... 30 7.8
>X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312)
protein.
Length = 312
Score = 217 bits (531), Expect = 3e-56
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 67 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 126
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLDS
Sbjct: 127 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 186
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 187 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 246
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 247 LSQPFQV 253
Score = 39.1 bits (87), Expect = 0.017
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ +EP GARARVALTG
Sbjct: 46 SKVALVYGQMNEPPGARARVALTG 69
Score = 38.3 bits (85), Expect = 0.030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 108 EMDHIPEAAFYMVGTIEDVIAK 43
E DH+PE AFYMVG IE+ +AK
Sbjct: 281 EYDHLPEQAFYMVGPIEEAVAK 302
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 217 bits (531), Expect = 3e-56
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 294 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 353
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLDS
Sbjct: 354 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 413
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 414 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 473
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 474 LSQPFQV 480
Score = 38.3 bits (85), Expect = 0.030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 108 EMDHIPEAAFYMVGTIEDVIAK 43
E DH+PE AFYMVG IE+ +AK
Sbjct: 508 EYDHLPEQAFYMVGPIEEAVAK 529
Score = 37.9 bits (84), Expect = 0.039
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ ++P GARARVALTG
Sbjct: 273 SKVALVYGQMNQPPGARARVALTG 296
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 217 bits (531), Expect = 3e-56
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 284 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 343
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLDS
Sbjct: 344 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 403
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 404 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 464 LSQPFQV 470
Score = 39.1 bits (87), Expect = 0.017
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ +EP GARARVALTG
Sbjct: 263 SKVALVYGQMNEPPGARARVALTG 286
Score = 38.3 bits (85), Expect = 0.030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 108 EMDHIPEAAFYMVGTIEDVIAK 43
E DH+PE AFYMVG IE+ +AK
Sbjct: 498 EYDHLPEQAFYMVGPIEEAVAK 519
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 217 bits (531), Expect = 3e-56
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 294 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 353
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLDS
Sbjct: 354 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 413
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 414 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 473
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 474 LSQPFQV 480
Score = 38.3 bits (85), Expect = 0.030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 108 EMDHIPEAAFYMVGTIEDVIAK 43
E DH+PE AFYMVG IE+ +AK
Sbjct: 508 EYDHLPEQAFYMVGPIEEAVAK 529
Score = 37.9 bits (84), Expect = 0.039
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ ++P GARARVALTG
Sbjct: 273 SKVALVYGQMNQPPGARARVALTG 296
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 217 bits (531), Expect = 3e-56
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 220 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 279
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLDS
Sbjct: 280 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 339
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 340 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 399
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 400 LSQPFQV 406
Score = 39.1 bits (87), Expect = 0.017
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ +EP GARARVALTG
Sbjct: 199 SKVALVYGQMNEPPGARARVALTG 222
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 217 bits (531), Expect = 3e-56
Identities = 117/187 (62%), Positives = 141/187 (75%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 284 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 343
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFAHLDATTVLS AIAELG+YPAVDPLDS
Sbjct: 344 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDS 403
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 404 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 463
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 464 LSQPFQV 470
Score = 39.1 bits (87), Expect = 0.017
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ +EP GARARVALTG
Sbjct: 263 SKVALVYGQMNEPPGARARVALTG 286
Score = 38.3 bits (85), Expect = 0.030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 108 EMDHIPEAAFYMVGTIEDVIAK 43
E DH+PE AFYMVG IE+ +AK
Sbjct: 498 EYDHLPEQAFYMVGPIEEAVAK 519
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 214 bits (522), Expect = 3e-55
Identities = 116/187 (62%), Positives = 140/187 (74%), Gaps = 22/187 (11%)
Frame = -2
Query: 611 LDRVTLAEHFRDEEGQDLLLFIDNIFRFTQAGSEV-----RTRSSYQFEGRGGR------ 465
L +T+AE+FRD+EGQD+LLFIDNIFRFTQAGSEV R S+ ++
Sbjct: 284 LTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQ 343
Query: 464 ---FTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLDS 294
T K ++++A+YVPADDLTDPAPATTFA LDATTVLS AIAELG+YPAVDPLDS
Sbjct: 344 ERITTTKKGSITSVQAIYVPADDLTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDS 403
Query: 293 TSRVMDPNIIGAEHYGIARGVQKILQD--------IILGMEELSEDDQPEIARARKIQRF 138
TSR+MDPNI+G+EHY +ARGVQKILQD ILGM+ELSE+D+ ++RARKIQRF
Sbjct: 404 TSRIMDPNIVGSEHYDVARGVQKILQDYKSLHDIIAILGMDELSEEDKLTVSRARKIQRF 463
Query: 137 PSQPIQI 117
SQP Q+
Sbjct: 464 LSQPFQV 470
Score = 38.3 bits (85), Expect = 0.030
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1
Query: 108 EMDHIPEAAFYMVGTIEDVIAK 43
E DH+PE AFYMVG IE+ +AK
Sbjct: 498 EYDHLPEQAFYMVGPIEEAVAK 519
Score = 37.9 bits (84), Expect = 0.039
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -3
Query: 673 TRASLVYGQKDEPHGARARVALTG 602
++ +LVYGQ ++P GARARVALTG
Sbjct: 263 SKVALVYGQMNQPPGARARVALTG 286
>M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembrane
proton pump subunit mRNA, complete cds. ).
Length = 511
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 482 EGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDP 303
EGRGG T + + +P DD+T P P T + + + +YP ++
Sbjct: 334 EGRGGSIT-------QIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV 386
Query: 302 LDSTSRVM 279
L S SR+M
Sbjct: 387 LPSLSRLM 394
>BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B1 (Renal tubular acido
protein.
Length = 513
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 482 EGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDP 303
EGRGG T + + +P DD+T P P T + + + +YP ++
Sbjct: 336 EGRGGSIT-------QIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV 388
Query: 302 LDSTSRVM 279
L S SR+M
Sbjct: 389 LPSLSRLM 396
>BC011047-1|AAH11047.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRI-PGTPGSPARTPA 693
TRS G PR PS R+ GTP SP R PA
Sbjct: 369 TRSDDTGTGPRRERPSRRLTTGTPASPRRPPA 400
>BC007624-1|AAH07624.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRI-PGTPGSPARTPA 693
TRS G PR PS R+ GTP SP R PA
Sbjct: 369 TRSDDTGTGPRRERPSRRLTTGTPASPRRPPA 400
>BC001782-1|AAH01782.1| 681|Homo sapiens growth arrest-specific 2
like 1 protein.
Length = 681
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRI-PGTPGSPARTPA 693
TRS G PR PS R+ GTP SP R PA
Sbjct: 369 TRSDDTGTGPRRERPSRRLTTGTPASPRRPPA 400
>AK223602-1|BAD97322.1| 681|Homo sapiens growth arrest-specific 2
like 1 isoform a variant protein.
Length = 681
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRI-PGTPGSPARTPA 693
TRS G PR PS R+ GTP SP R PA
Sbjct: 369 TRSDDTGTGPRRERPSRRLTTGTPASPRRPPA 400
>AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kD, V1 subunit B, isoform 1 variant
protein.
Length = 513
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 482 EGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDP 303
EGRGG T + + +P DD+T P P T + + + +YP ++
Sbjct: 336 EGRGGSIT-------QIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV 388
Query: 302 LDSTSRVM 279
L S SR+M
Sbjct: 389 LPSLSRLM 396
>AK093386-1|BAC04150.1| 681|Homo sapiens protein ( Homo sapiens
cDNA FLJ36067 fis, clone TESTI2019308, highly similar to
GAR22 PROTEIN. ).
Length = 681
Score = 32.3 bits (70), Expect = 1.9
Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRI-PGTPGSPARTPA 693
TRS G PR PS R+ GTP SP R PA
Sbjct: 369 TRSDDTGTGPRRERPSRRLTTGTPASPRRPPA 400
>AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subunit
protein.
Length = 426
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = -2
Query: 482 EGRGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDP 303
EGRGG T + + +P DD+T P P T + + + +YP ++
Sbjct: 300 EGRGGSIT-------QIPILTMPNDDITHPIPDLTGFITEGQIYVDRQLHNRQIYPPINV 352
Query: 302 LDSTSRVM 279
L S SR+M
Sbjct: 353 LPSLSRLM 360
>AL832450-1|CAD38626.1| 217|Homo sapiens hypothetical protein
protein.
Length = 217
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +1
Query: 598 VTRSRPPGHAPRGAHPSGRIPGTPGSPARTPAK 696
VT PP APR GR PG P SPA PA+
Sbjct: 15 VTGGIPPEAAPR-LQQRGRDPGAPPSPAPAPAR 46
>X62949-1|CAA44721.1| 511|Homo sapiens vacuolar isoform 2 of
H+ATPase Mr 56,000 subunit protein.
Length = 511
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 476 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 297
R GR + + + + +P DD+T P P T + + + +YP ++ L
Sbjct: 337 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLP 396
Query: 296 STSRVM 279
S SR+M
Sbjct: 397 SLSRLM 402
>M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein.
Length = 406
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 476 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 297
R GR + + + + +P DD+T P P T + + + +YP ++ L
Sbjct: 232 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLP 291
Query: 296 STSRVM 279
S SR+M
Sbjct: 292 SLSRLM 297
>L35249-1|AAA58661.1| 511|Homo sapiens vacuolar H+-ATPase 56,000
subunit protein.
Length = 511
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 476 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 297
R GR + + + + +P DD+T P P T + + + +YP ++ L
Sbjct: 337 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGLIYVDRQLHNRQIYPPINVLP 396
Query: 296 STSRVM 279
S SR+M
Sbjct: 397 SLSRLM 402
>BC007309-1|AAH07309.1| 501|Homo sapiens ATP6V1B2 protein protein.
Length = 501
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 476 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 297
R GR + + + + +P DD+T P P T + + + +YP ++ L
Sbjct: 327 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLP 386
Query: 296 STSRVM 279
S SR+M
Sbjct: 387 SLSRLM 392
>BC003100-1|AAH03100.1| 511|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B2 protein.
Length = 511
Score = 31.1 bits (67), Expect = 4.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 476 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 297
R GR + + + + +P DD+T P P T + + + +YP ++ L
Sbjct: 337 RAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLP 396
Query: 296 STSRVM 279
S SR+M
Sbjct: 397 SLSRLM 402
>Y13467-1|CAA73867.1| 1566|Homo sapiens RB18A protein protein.
Length = 1566
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRIPGT-PGSPARTPAKITSRNS 714
+ SRPPG + + A P +PGT P S A++P S S
Sbjct: 1179 SHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGS 1217
>X14474-1|CAA32636.1| 383|Homo sapiens protein ( Human mRNA for
microtubule-associated tau protein. ).
Length = 383
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>J03778-1|AAA60615.1| 352|Homo sapiens MTBT1 protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BT006772-1|AAP35418.1| 352|Homo sapiens microtubule-associated
protein tau protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BC131783-1|AAI31784.1| 1581|Homo sapiens mediator complex subunit 1
protein.
Length = 1581
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRIPGT-PGSPARTPAKITSRNS 714
+ SRPPG + + A P +PGT P S A++P S S
Sbjct: 1194 SHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGS 1232
>BC114948-1|AAI14949.1| 383|Homo sapiens microtubule-associated
protein tau protein.
Length = 383
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BC114504-1|AAI14505.1| 352|Homo sapiens microtubule-associated
protein tau, isoform 4 protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BC101936-1|AAI01937.1| 352|Homo sapiens microtubule-associated
protein tau protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BC099721-1|AAH99721.1| 352|Homo sapiens microtubule-associated
protein tau protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BC098281-1|AAH98281.1| 352|Homo sapiens microtubule-associated
protein tau protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>BC030640-1|AAH30640.1| 511|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B2 protein.
Length = 511
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 476 RGGRFTVKLSLRSNLKAVYVPADDLTDPAPATTFAHLDATTVLSPAIAELGVYPAVDPLD 297
R GR + + + + +P DD+T P P T + + + +YP ++ L
Sbjct: 337 RAGRVGGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLP 396
Query: 296 STSRVM 279
S SR+M
Sbjct: 397 SLSRLM 402
>BC000558-1|AAH00558.1| 352|Homo sapiens microtubule-associated
protein tau protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>AY730549-1|AAU45390.1| 412|Homo sapiens microtubule-associated tau
protein protein.
Length = 412
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 159 PPKSGDRSGYSSPGSPGTPGSRSRTPS 185
>AY526356-1|AAS17881.1| 244|Homo sapiens microtubule-associated
protein tau protein.
Length = 244
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 40 PPKSGDRSGYSSPGSPGTPGSRSRTPS 66
>AF283812-1|AAF98352.1| 1566|Homo sapiens vitamin D
receptor-interacting protein complex component DRIP205
protein.
Length = 1566
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRIPGT-PGSPARTPAKITSRNS 714
+ SRPPG + + A P +PGT P S A++P S S
Sbjct: 1179 SHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGS 1217
>AF055994-1|AAC39854.1| 1581|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP220
protein.
Length = 1581
Score = 30.7 bits (66), Expect = 5.9
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 601 TRSRPPGHAPRGAHPSGRIPGT-PGSPARTPAKITSRNS 714
+ SRPPG + + A P +PGT P S A++P S S
Sbjct: 1194 SHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGS 1232
>AF047863-3|AAC04278.1| 352|Homo sapiens CNS specific
microtubule-associated protein tau, fetal isoform
protein.
Length = 352
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 130 PPKSGDRSGYSSPGSPGTPGSRSRTPS 156
>AF047863-2|AAC04279.1| 441|Homo sapiens CNS specific
microtubule-associated protein tau, adult isoform
protein.
Length = 441
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 188 PPKSGDRSGYSSPGSPGTPGSRSRTPS 214
>AF047863-1|AAC04277.1| 758|Homo sapiens PNS specific
microtubule-associated protein tau, adult isoform
protein.
Length = 758
Score = 30.7 bits (66), Expect = 5.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 613 PPGHAPRGAHPSGRIPGTPGSPARTPA 693
PP R + S PGTPGS +RTP+
Sbjct: 505 PPKSGDRSGYSSPGSPGTPGSRSRTPS 531
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 7.8
Identities = 25/81 (30%), Positives = 35/81 (43%)
Frame = -2
Query: 365 DATTVLSPAIAELGVYPAVDPLDSTSRVMDPNIIGAEHYGIARGVQKILQDIILGMEELS 186
++ + LSP + E G TS V+ IGA V + I G E +
Sbjct: 7241 ESISSLSPKLRETGSSVETSSAIETSAVLSEVSIGATTEISRTEVTSSSRTSISGSAEST 7300
Query: 185 EDDQPEIARARKIQRFPSQPI 123
PEI+ RKI +FP+ PI
Sbjct: 7301 M--LPEISTTRKIIKFPTSPI 7319
>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
candidate region protein 1 protein.
Length = 1509
Score = 30.3 bits (65), Expect = 7.8
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 616 PGHAPRGAHPSGRIPGTPGSPARTPAKITSRNS*LLRHI 732
PG AP G P+GR G GSPA PAK+ S L+R +
Sbjct: 1347 PG-APEGT-PAGRARG--GSPAPLPAKVDEATSGLIREL 1381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,056,289
Number of Sequences: 237096
Number of extensions: 2366226
Number of successful extensions: 10067
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 8055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10027
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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