Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k21
(794 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 25 0.81
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 25 1.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 1.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 1.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 1.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 1.4
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 3.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 3.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 4.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.7
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 7.5
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 10.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 10.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 10.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 10.0
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 10.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 10.0
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 25.0 bits (52), Expect = 0.81
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 730 KLECTLVGSTDKRDRRVTSGVEERKRFGPCRQISRCVTCSIHHVPN 593
K C + + DKR+ VTS +++R GP S + +PN
Sbjct: 113 KQACGFIDNIDKRNLSVTSMIQKR-ALGPSFSTGERCRISSNFLPN 157
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 243 AKKHDLGRKMRSFCGLTKNGSLDIVTNE 160
AK+ D GRK +FCG + + +++ N+
Sbjct: 513 AKRLDHGRKTWTFCGTPEYVAPEVILNK 540
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +1
Query: 253 YNNKY--C*KHNYSSHYYRSTFI 315
YNN Y KHNY+ YY +I
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINYI 349
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 164 MRYLKVKQTISKVLSKIKFDADLLATNNVKIK 69
+RY KQ KVL I+ A +L + KIK
Sbjct: 428 LRYRGPKQNKPKVLHAIRRGASILRVSMPKIK 459
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.0 bits (47), Expect = 3.3
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +2
Query: 386 SRIPSVDNCLSPVIVSSTVFQSSLAPSAMPLLNNFPTSLC 505
S+ P + PV+ SST S + + ++ N S C
Sbjct: 310 SQCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +1
Query: 241 STVQYNNKYC*KHNYSSHYYRSTFI 315
++ Y+N Y +NY YY +I
Sbjct: 309 NSCNYSNNYYNNNNYKKLYYNINYI 333
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +1
Query: 253 YNNKYC*KHNYSSHY---YRSTFIHIFY 327
YNN Y +NY+++Y Y+ + +I Y
Sbjct: 330 YNNNYNNYNNYNNNYNNNYKKLYYNINY 357
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic
acetylcholine receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 7.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 91 PRIMLKLNRYIVIEY 47
P +LKL RY+ EY
Sbjct: 41 PTTLLKLKRYLFCEY 55
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 439 CARNNDRGKTIIDRRNPRILFDSRRFLKKR 350
C+R+ +R DRR ++ + +FL++R
Sbjct: 4 CSRDRNREYRKKDRRYEKLHNEKEKFLEER 33
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 439 CARNNDRGKTIIDRRNPRILFDSRRFLKKR 350
C+R+ +R DRR ++ + +FL++R
Sbjct: 4 CSRDRNREYRKKDRRYEKLHNEKEKFLEER 33
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 439 CARNNDRGKTIIDRRNPRILFDSRRFLKKR 350
C+R+ +R DRR ++ + +FL++R
Sbjct: 4 CSRDRNREYRKKDRRYEKLHNEKEKFLEER 33
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 439 CARNNDRGKTIIDRRNPRILFDSRRFLKKR 350
C+R+ +R DRR ++ + +FL++R
Sbjct: 4 CSRDRNREYRKKDRRYEKLHNEKEKFLEER 33
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 439 CARNNDRGKTIIDRRNPRILFDSRRFLKKR 350
C+R+ +R DRR ++ + +FL++R
Sbjct: 4 CSRDRNREYRKKDRRYEKLHNEKEKFLEER 33
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 10.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 439 CARNNDRGKTIIDRRNPRILFDSRRFLKKR 350
C+R+ +R DRR ++ + +FL++R
Sbjct: 4 CSRDRNREYRKKDRRYEKLHNEKEKFLEER 33
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,567
Number of Sequences: 438
Number of extensions: 5248
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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