Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k20
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047569-1|AAH47569.1| 253|Homo sapiens membrane-associated rin... 65 3e-10
BC111388-1|AAI11389.1| 246|Homo sapiens membrane-associated rin... 64 4e-10
BC032624-1|AAH32624.1| 246|Homo sapiens MARCH2 protein protein. 64 4e-10
BC015910-1|AAH15910.1| 239|Homo sapiens MARCH2 protein protein. 64 4e-10
AB197929-1|BAD89359.1| 246|Homo sapiens membrane-associated RIN... 64 4e-10
BC066988-1|AAH66988.1| 291|Homo sapiens membrane-associated rin... 63 1e-09
BC025394-1|AAH25394.1| 291|Homo sapiens membrane-associated rin... 63 1e-09
AL731567-2|CAI41244.1| 291|Homo sapiens membrane-associated rin... 63 1e-09
AL512595-1|CAI12414.1| 291|Homo sapiens membrane-associated rin... 63 1e-09
AK000675-1|BAA91319.1| 272|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AL731567-4|CAI41247.1| 455|Homo sapiens membrane-associated rin... 60 7e-09
BC050397-1|AAH50397.1| 489|Homo sapiens MARCH9 protein protein. 56 2e-07
BC036455-1|AAH36455.2| 346|Homo sapiens membrane-associated rin... 56 2e-07
AB011169-1|BAA25523.1| 971|Homo sapiens KIAA0597 protein protein. 55 4e-07
BC098448-1|AAH98448.1| 410|Homo sapiens membrane-associated rin... 54 8e-07
BC048793-1|AAH48793.1| 357|Homo sapiens MARCH4 protein protein. 54 8e-07
AB037820-1|BAA92637.1| 452|Homo sapiens KIAA1399 protein protein. 54 8e-07
BC142694-1|AAI42695.1| 910|Homo sapiens membrane-associated rin... 52 3e-06
BC142679-1|AAI42680.1| 910|Homo sapiens membrane-associated rin... 52 3e-06
AK097506-1|BAC05079.1| 581|Homo sapiens protein ( Homo sapiens ... 45 4e-04
AK093076-1|BAC04044.1| 808|Homo sapiens protein ( Homo sapiens ... 45 4e-04
BC065014-1|AAH65014.1| 704|Homo sapiens membrane-associated rin... 41 0.006
BC003404-1|AAH03404.1| 225|Homo sapiens MARCH7 protein protein. 41 0.006
AK222880-1|BAD96600.1| 704|Homo sapiens axotrophin variant prot... 41 0.006
AK022973-1|BAB14340.1| 704|Homo sapiens protein ( Homo sapiens ... 41 0.006
AC009961-1|AAY14941.1| 704|Homo sapiens unknown protein. 41 0.006
AF217743-1|AAK51611.1| 734|Homo sapiens protocadherin-psi2 prot... 37 0.076
BC015480-1|AAH15480.1| 278|Homo sapiens membrane-associated rin... 36 0.13
AL161652-2|CAI15361.1| 278|Homo sapiens membrane-associated rin... 36 0.13
AL158040-6|CAI13639.1| 278|Homo sapiens membrane-associated rin... 36 0.13
AK000452-1|BAA91173.1| 278|Homo sapiens protein ( Homo sapiens ... 36 0.13
AB191202-1|BAF02285.1| 278|Homo sapiens membrane-associated RIN... 36 0.13
BC099728-1|AAH99728.1| 798|Homo sapiens protocadherin beta 14 p... 31 3.8
BC098144-1|AAH98144.1| 797|Homo sapiens PCDHB14 protein protein. 31 3.8
AF217744-1|AAK51612.1| 798|Homo sapiens protocadherin-beta14 pr... 31 3.8
AF152493-1|AAD43754.1| 798|Homo sapiens protocadherin beta 14 p... 31 3.8
BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein. 31 6.6
AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein. 31 6.6
BC023638-1|AAH23638.1| 540|Homo sapiens MPP6 protein protein. 30 8.7
AC005084-1|AAQ96847.1| 540|Homo sapiens unknown protein. 30 8.7
>BC047569-1|AAH47569.1| 253|Homo sapiens membrane-associated ring
finger (C3HC4) 3 protein.
Length = 253
Score = 64.9 bits (151), Expect = 3e-10
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = -2
Query: 532 VCRICMT-RGRERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPAIRTPR 362
+CRIC +E L+SPC C G+L +H +CLE WL+ ++CELC F + R PR
Sbjct: 70 MCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAVERKPR 127
>BC111388-1|AAI11389.1| 246|Homo sapiens membrane-associated ring
finger (C3HC4) 2 protein.
Length = 246
Score = 64.5 bits (150), Expect = 4e-10
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = -2
Query: 529 CRICMTRGR-ERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPAIRTPRYTV 353
CRIC E L+SPC C G+L VH +CLE+WL+ ++CELC + + PR
Sbjct: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR--- 120
Query: 352 LQALRLWFGNPRNRSHLQSDC--LIFWLLSTVTAGLLA-VCIVGTQ 224
L W +P R+ ++ C ++ +L T A + +C+ G Q
Sbjct: 121 --PLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQ 164
>BC032624-1|AAH32624.1| 246|Homo sapiens MARCH2 protein protein.
Length = 246
Score = 64.5 bits (150), Expect = 4e-10
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = -2
Query: 529 CRICMTRGR-ERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPAIRTPRYTV 353
CRIC E L+SPC C G+L VH +CLE+WL+ ++CELC + + PR
Sbjct: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR--- 120
Query: 352 LQALRLWFGNPRNRSHLQSDC--LIFWLLSTVTAGLLA-VCIVGTQ 224
L W +P R+ ++ C ++ +L T A + +C+ G Q
Sbjct: 121 --PLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQ 164
>BC015910-1|AAH15910.1| 239|Homo sapiens MARCH2 protein protein.
Length = 239
Score = 64.5 bits (150), Expect = 4e-10
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = -2
Query: 529 CRICMTRGR-ERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPAIRTPRYTV 353
CRIC E L+SPC C G+L VH +CLE+WL+ ++CELC + + PR
Sbjct: 57 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR--- 113
Query: 352 LQALRLWFGNPRNRSHLQSDC--LIFWLLSTVTAGLLA-VCIVGTQ 224
L W +P R+ ++ C ++ +L T A + +C+ G Q
Sbjct: 114 --PLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQ 157
>AB197929-1|BAD89359.1| 246|Homo sapiens membrane-associated
RING-CH family member 2 protein.
Length = 246
Score = 64.5 bits (150), Expect = 4e-10
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = -2
Query: 529 CRICMTRGR-ERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPAIRTPRYTV 353
CRIC E L+SPC C G+L VH +CLE+WL+ ++CELC + + PR
Sbjct: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR--- 120
Query: 352 LQALRLWFGNPRNRSHLQSDC--LIFWLLSTVTAGLLA-VCIVGTQ 224
L W +P R+ ++ C ++ +L T A + +C+ G Q
Sbjct: 121 --PLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQ 164
>BC066988-1|AAH66988.1| 291|Homo sapiens membrane-associated ring
finger (C3HC4) 8 protein.
Length = 291
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Frame = -2
Query: 562 RDSISSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGF 389
R SI+ ++CRIC G + LI+PC+C GSL VH CL++W+ CELC +
Sbjct: 69 RTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 128
Query: 388 SYPAIRTPRYTVLQALRLWFGNPRNRSHLQSDCLIFWLLSTVTAGLLAV-CIVGTQYFVI 212
+ T L+ LR W S + ++ +VT ++A+ C+V + Y +I
Sbjct: 129 EF-----IMETKLKPLRKWEKLQMTSSERRK------IMCSVTFHVIAITCVVWSLYVLI 177
Query: 211 EGNKFGKLDAGRKQEGISHRITETAMDFFMAIVLCGYS---VTVYLLWKDHYIMWNRWRR 41
+ A ++G + I E + +V G++ + +Y+ K + +W R +
Sbjct: 178 DRT------AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKA 231
Query: 40 ANVNVQITTDP 8
N + + P
Sbjct: 232 YNRVIYVQNCP 242
>BC025394-1|AAH25394.1| 291|Homo sapiens membrane-associated ring
finger (C3HC4) 8 protein.
Length = 291
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Frame = -2
Query: 562 RDSISSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGF 389
R SI+ ++CRIC G + LI+PC+C GSL VH CL++W+ CELC +
Sbjct: 69 RTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 128
Query: 388 SYPAIRTPRYTVLQALRLWFGNPRNRSHLQSDCLIFWLLSTVTAGLLAV-CIVGTQYFVI 212
+ T L+ LR W S + ++ +VT ++A+ C+V + Y +I
Sbjct: 129 EF-----IMETKLKPLRKWEKLQMTSSERRK------IMCSVTFHVIAITCVVWSLYVLI 177
Query: 211 EGNKFGKLDAGRKQEGISHRITETAMDFFMAIVLCGYS---VTVYLLWKDHYIMWNRWRR 41
+ A ++G + I E + +V G++ + +Y+ K + +W R +
Sbjct: 178 DRT------AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKA 231
Query: 40 ANVNVQITTDP 8
N + + P
Sbjct: 232 YNRVIYVQNCP 242
>AL731567-2|CAI41244.1| 291|Homo sapiens membrane-associated ring
finger (C3HC4) 8 protein.
Length = 291
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Frame = -2
Query: 562 RDSISSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGF 389
R SI+ ++CRIC G + LI+PC+C GSL VH CL++W+ CELC +
Sbjct: 69 RTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 128
Query: 388 SYPAIRTPRYTVLQALRLWFGNPRNRSHLQSDCLIFWLLSTVTAGLLAV-CIVGTQYFVI 212
+ T L+ LR W S + ++ +VT ++A+ C+V + Y +I
Sbjct: 129 EF-----IMETKLKPLRKWEKLQMTSSERRK------IMCSVTFHVIAITCVVWSLYVLI 177
Query: 211 EGNKFGKLDAGRKQEGISHRITETAMDFFMAIVLCGYS---VTVYLLWKDHYIMWNRWRR 41
+ A ++G + I E + +V G++ + +Y+ K + +W R +
Sbjct: 178 DRT------AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKA 231
Query: 40 ANVNVQITTDP 8
N + + P
Sbjct: 232 YNRVIYVQNCP 242
>AL512595-1|CAI12414.1| 291|Homo sapiens membrane-associated ring
finger (C3HC4) 8 protein.
Length = 291
Score = 62.9 bits (146), Expect = 1e-09
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Frame = -2
Query: 562 RDSISSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGF 389
R SI+ ++CRIC G + LI+PC+C GSL VH CL++W+ CELC +
Sbjct: 69 RTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKY 128
Query: 388 SYPAIRTPRYTVLQALRLWFGNPRNRSHLQSDCLIFWLLSTVTAGLLAV-CIVGTQYFVI 212
+ T L+ LR W S + ++ +VT ++A+ C+V + Y +I
Sbjct: 129 EF-----IMETKLKPLRKWEKLQMTSSERRK------IMCSVTFHVIAITCVVWSLYVLI 177
Query: 211 EGNKFGKLDAGRKQEGISHRITETAMDFFMAIVLCGYS---VTVYLLWKDHYIMWNRWRR 41
+ A ++G + I E + +V G++ + +Y+ K + +W R +
Sbjct: 178 DRT------AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKA 231
Query: 40 ANVNVQITTDP 8
N + + P
Sbjct: 232 YNRVIYVQNCP 242
>AK000675-1|BAA91319.1| 272|Homo sapiens protein ( Homo sapiens
cDNA FLJ20668 fis, clone KAIA585. ).
Length = 272
Score = 62.1 bits (144), Expect = 2e-09
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Frame = -2
Query: 640 KLSKLGTDKKKTSGGLSERSDLVLAQRDSISSIGSNVCRICMTRGRER--LISPCNCKGS 467
KLS L + G + RS R S+ ++CRIC G E LI+PC C G+
Sbjct: 30 KLSNLFLQASSPTTGTAPRSQ----SRLSVCPSTQDICRICHCEGDEESPLITPCRCTGT 85
Query: 466 LANVHLTCLERWLNQVGRNHCELCGFSYPAIRTPRYTVLQALRLWFGNPRNRSHLQSDCL 287
L VH +CL +W+ CELC + + T L+ LR W S +
Sbjct: 86 LRFVHQSCLHQWIKSSDTRCCELCKYDF-----IMETKLKPLRKWEKLQMTTSERRK--- 137
Query: 286 IFWLLSTVTAGLLAV-CIVGTQYFVIEGNKFGKLDAGRKQEGISHRITETAMDFFMAIVL 110
+ +VT ++A+ C+V + Y +I+ A ++G + + E + +V
Sbjct: 138 ---IFCSVTFHVIAITCVVWSLYVLIDRT------AEEIKQGNDNGVLEWPFWTKLVVVA 188
Query: 109 CGYS---VTVYLLWKDHYIMWNRWRRAN 35
G++ V +Y+ K + +W R + N
Sbjct: 189 IGFTGGLVFMYVQCKVYVQLWRRLKAYN 216
>AL731567-4|CAI41247.1| 455|Homo sapiens membrane-associated ring
finger (C3HC4) 8 protein.
Length = 455
Score = 60.5 bits (140), Expect = 7e-09
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Frame = -2
Query: 547 SIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPAI 374
S +VCRIC G + LI+PC+C GSL VH CL++W+ CELC + +
Sbjct: 238 STSGDVCRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF--- 294
Query: 373 RTPRYTVLQALRLWFGNPRNRSHLQSDCLIFWLLSTVTAGLLAV-CIVGTQYFVIEGNKF 197
T L+ LR W S + ++ +VT ++A+ C+V + Y +I+
Sbjct: 295 --IMETKLKPLRKWEKLQMTSSERRK------IMCSVTFHVIAITCVVWSLYVLIDRT-- 344
Query: 196 GKLDAGRKQEGISHRITETAMDFFMAIVLCGYS---VTVYLLWKDHYIMWNRWRRANVNV 26
A ++G + I E + +V G++ + +Y+ K + +W R + N +
Sbjct: 345 ----AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVI 400
Query: 25 QITTDP 8
+ P
Sbjct: 401 YVQNCP 406
>BC050397-1|AAH50397.1| 489|Homo sapiens MARCH9 protein protein.
Length = 489
Score = 56.0 bits (129), Expect = 2e-07
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = -2
Query: 550 SSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYP- 380
S + + CRIC +G E+ L+SPC C GS+ H CL RW+++ G CELC F Y
Sbjct: 246 SGLRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQV 304
Query: 379 -AIRTPRYTVLQALRL 335
AI T QA+ L
Sbjct: 305 LAISTKNPLQWQAISL 320
>BC036455-1|AAH36455.2| 346|Homo sapiens membrane-associated ring
finger (C3HC4) 9 protein.
Length = 346
Score = 56.0 bits (129), Expect = 2e-07
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = -2
Query: 550 SSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYP- 380
S + + CRIC +G E+ L+SPC C GS+ H CL RW+++ G CELC F Y
Sbjct: 103 SGLRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQV 161
Query: 379 -AIRTPRYTVLQALRL 335
AI T QA+ L
Sbjct: 162 LAISTKNPLQWQAISL 177
>AB011169-1|BAA25523.1| 971|Homo sapiens KIAA0597 protein protein.
Length = 971
Score = 54.8 bits (126), Expect = 4e-07
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = -2
Query: 586 RSDLVLAQRDSISSIGSNVCRICMTRG--RERLISPCNCKGSLANVHLTCLERWLNQVGR 413
R + A D + + ++CR+C + G + L PC C GS+ +H CL +WL +
Sbjct: 51 RGCVTAAPPDKMDTAEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRK 110
Query: 412 NHCELC--GFSYPAIRTP 365
+CELC F++ I +P
Sbjct: 111 EYCELCKHRFAFTPIYSP 128
>BC098448-1|AAH98448.1| 410|Homo sapiens membrane-associated ring
finger (C3HC4) 4 protein.
Length = 410
Score = 53.6 bits (123), Expect = 8e-07
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 SSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPA 377
S + + +CRIC +G E+ L+SPC C GS+ H CL +W+++ G CELC + Y
Sbjct: 156 SGMRTPLCRICF-QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHV 214
Query: 376 IRTPRYTVLQ 347
I LQ
Sbjct: 215 IAISTKNPLQ 224
>BC048793-1|AAH48793.1| 357|Homo sapiens MARCH4 protein protein.
Length = 357
Score = 53.6 bits (123), Expect = 8e-07
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 SSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPA 377
S + + +CRIC +G E+ L+SPC C GS+ H CL +W+++ G CELC + Y
Sbjct: 103 SGMRTPLCRICF-QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHV 161
Query: 376 IRTPRYTVLQ 347
I LQ
Sbjct: 162 IAISTKNPLQ 171
>AB037820-1|BAA92637.1| 452|Homo sapiens KIAA1399 protein protein.
Length = 452
Score = 53.6 bits (123), Expect = 8e-07
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -2
Query: 550 SSIGSNVCRICMTRGRER--LISPCNCKGSLANVHLTCLERWLNQVGRNHCELCGFSYPA 377
S + + +CRIC +G E+ L+SPC C GS+ H CL +W+++ G CELC + Y
Sbjct: 198 SGMRTPLCRICF-QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHV 256
Query: 376 IRTPRYTVLQ 347
I LQ
Sbjct: 257 IAISTKNPLQ 266
>BC142694-1|AAI42695.1| 910|Homo sapiens membrane-associated ring
finger (C3HC4) 6 protein.
Length = 910
Score = 51.6 bits (118), Expect = 3e-06
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = -2
Query: 535 NVCRICMTRG--RERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELC--GFSYPAIRT 368
++CR+C + G + L PC C GS+ +H CL +WL + +CELC F++ I +
Sbjct: 7 DICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYS 66
Query: 367 P 365
P
Sbjct: 67 P 67
>BC142679-1|AAI42680.1| 910|Homo sapiens membrane-associated ring
finger (C3HC4) 6 protein.
Length = 910
Score = 51.6 bits (118), Expect = 3e-06
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = -2
Query: 535 NVCRICMTRG--RERLISPCNCKGSLANVHLTCLERWLNQVGRNHCELC--GFSYPAIRT 368
++CR+C + G + L PC C GS+ +H CL +WL + +CELC F++ I +
Sbjct: 7 DICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYS 66
Query: 367 P 365
P
Sbjct: 67 P 67
>AK097506-1|BAC05079.1| 581|Homo sapiens protein ( Homo sapiens
cDNA FLJ40187 fis, clone TESTI2018941, moderately
similar to Mus musculus axotrophin mRNA. ).
Length = 581
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -2
Query: 622 TDKKKTSGGLSERSDLVLAQRDSI---SSIGSNVCRICMTRG---RERLISPCNCKGSLA 461
TD+K+TS ++ L Q + S ++CRIC G L+ PC C GSL
Sbjct: 438 TDEKETSKIKADPEKLKKLQESLLEEDSEEEGDLCRICQIAGGSPSNPLLEPCGCVGSLQ 497
Query: 460 NVHLTCLERWL 428
VH CL++WL
Sbjct: 498 FVHQECLKKWL 508
>AK093076-1|BAC04044.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ35757 fis, clone TESTI2004689, moderately
similar to Mus musculus axotrophin mRNA. ).
Length = 808
Score = 44.8 bits (101), Expect = 4e-04
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -2
Query: 622 TDKKKTSGGLSERSDLVLAQRDSI---SSIGSNVCRICMTRG---RERLISPCNCKGSLA 461
TD+K+TS ++ L Q + S ++CRIC G L+ PC C GSL
Sbjct: 625 TDEKETSKIKADPEKLKKLQESLLEEDSEEEGDLCRICQIAGGSPSNPLLEPCGCVGSLQ 684
Query: 460 NVHLTCLERWL 428
VH CL++WL
Sbjct: 685 FVHQECLKKWL 695
>BC065014-1|AAH65014.1| 704|Homo sapiens membrane-associated ring
finger (C3HC4) 7 protein.
Length = 704
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 535 NVCRICMTRGRER---LISPCNCKGSLANVHLTCLERWL 428
++CRIC LI PC C GSL VH C+++WL
Sbjct: 550 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWL 588
>BC003404-1|AAH03404.1| 225|Homo sapiens MARCH7 protein protein.
Length = 225
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 535 NVCRICMTRGRER---LISPCNCKGSLANVHLTCLERWL 428
++CRIC LI PC C GSL VH C+++WL
Sbjct: 71 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWL 109
>AK222880-1|BAD96600.1| 704|Homo sapiens axotrophin variant
protein.
Length = 704
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 535 NVCRICMTRGRER---LISPCNCKGSLANVHLTCLERWL 428
++CRIC LI PC C GSL VH C+++WL
Sbjct: 550 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWL 588
>AK022973-1|BAB14340.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ12911 fis, clone NT2RP2004425, highly similar to
Mus musculus axotrophin mRNA. ).
Length = 704
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 535 NVCRICMTRGRER---LISPCNCKGSLANVHLTCLERWL 428
++CRIC LI PC C GSL VH C+++WL
Sbjct: 550 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWL 588
>AC009961-1|AAY14941.1| 704|Homo sapiens unknown protein.
Length = 704
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 535 NVCRICMTRGRER---LISPCNCKGSLANVHLTCLERWL 428
++CRIC LI PC C GSL VH C+++WL
Sbjct: 550 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWL 588
>AF217743-1|AAK51611.1| 734|Homo sapiens protocadherin-psi2
protein.
Length = 734
Score = 37.1 bits (82), Expect = 0.076
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +3
Query: 426 FSHLSRQVKCTFARDPLQLQGEISLSRPRVIQILQTFE---PILEMESLCAKTKS----- 581
FSH+SR V+ TF P+ GE+ L P +I+Q++ +E SL K+
Sbjct: 227 FSHVSRDVRKTFEIHPIS--GEVYLKAPLDFEIIQSYIINIQAIEGGSLSGKSSILVRVV 284
Query: 582 DLSDRPPEVFFLSVPS 629
D++D PPE+ S+ S
Sbjct: 285 DVNDNPPEIAMTSLTS 300
>BC015480-1|AAH15480.1| 278|Homo sapiens membrane-associated ring
finger (C3HC4) 5 protein.
Length = 278
Score = 36.3 bits (80), Expect = 0.13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 493 ISPCNCKGSLANVHLTCLERWLNQVGRNH 407
+ PC C+GS VH CL+RW+++ R +
Sbjct: 30 VRPCRCRGSTKWVHQACLQRWVDEKQRGN 58
>AL161652-2|CAI15361.1| 278|Homo sapiens membrane-associated ring
finger (C3HC4) 5 protein.
Length = 278
Score = 36.3 bits (80), Expect = 0.13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 493 ISPCNCKGSLANVHLTCLERWLNQVGRNH 407
+ PC C+GS VH CL+RW+++ R +
Sbjct: 30 VRPCRCRGSTKWVHQACLQRWVDEKQRGN 58
>AL158040-6|CAI13639.1| 278|Homo sapiens membrane-associated ring
finger (C3HC4) 5 protein.
Length = 278
Score = 36.3 bits (80), Expect = 0.13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 493 ISPCNCKGSLANVHLTCLERWLNQVGRNH 407
+ PC C+GS VH CL+RW+++ R +
Sbjct: 30 VRPCRCRGSTKWVHQACLQRWVDEKQRGN 58
>AK000452-1|BAA91173.1| 278|Homo sapiens protein ( Homo sapiens
cDNA FLJ20445 fis, clone KAT05170. ).
Length = 278
Score = 36.3 bits (80), Expect = 0.13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 493 ISPCNCKGSLANVHLTCLERWLNQVGRNH 407
+ PC C+GS VH CL+RW+++ R +
Sbjct: 30 VRPCRCRGSTKWVHQACLQRWVDEKQRGN 58
>AB191202-1|BAF02285.1| 278|Homo sapiens membrane-associated
RING-CH protein V protein.
Length = 278
Score = 36.3 bits (80), Expect = 0.13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 493 ISPCNCKGSLANVHLTCLERWLNQVGRNH 407
+ PC C+GS VH CL+RW+++ R +
Sbjct: 30 VRPCRCRGSTKWVHQACLQRWVDEKQRGN 58
>BC099728-1|AAH99728.1| 798|Homo sapiens protocadherin beta 14
protein.
Length = 798
Score = 31.5 bits (68), Expect = 3.8
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Frame = +3
Query: 426 FSHLSRQVKCTFARDPLQLQGEISLSRPRVIQILQTFEPILE------MESLCAKTKS-- 581
F H S ++ TF +P+ GE++L P +++Q++ ++ + C
Sbjct: 281 FFHASEDIRKTFEINPIS--GEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVM 338
Query: 582 DLSDRPPEVFFLSVP------SFDSLFSVFAVTMTSFG----MISLVRASLLFKGAKTWV 731
D++D PPEV S+ + ++L ++F++ G MI ++ +L F T+
Sbjct: 339 DINDNPPEVTISSITKRIPENASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFK 398
Query: 732 SFWILVT 752
+F+ LV+
Sbjct: 399 NFFTLVS 405
>BC098144-1|AAH98144.1| 797|Homo sapiens PCDHB14 protein protein.
Length = 797
Score = 31.5 bits (68), Expect = 3.8
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Frame = +3
Query: 426 FSHLSRQVKCTFARDPLQLQGEISLSRPRVIQILQTFEPILE------MESLCAKTKS-- 581
F H S ++ TF +P+ GE++L P +++Q++ ++ + C
Sbjct: 280 FFHASEDIRKTFEINPIS--GEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVM 337
Query: 582 DLSDRPPEVFFLSVP------SFDSLFSVFAVTMTSFG----MISLVRASLLFKGAKTWV 731
D++D PPEV S+ + ++L ++F++ G MI ++ +L F T+
Sbjct: 338 DINDNPPEVTISSITKRIPENASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFK 397
Query: 732 SFWILVT 752
+F+ LV+
Sbjct: 398 NFFTLVS 404
>AF217744-1|AAK51612.1| 798|Homo sapiens protocadherin-beta14
protein.
Length = 798
Score = 31.5 bits (68), Expect = 3.8
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Frame = +3
Query: 426 FSHLSRQVKCTFARDPLQLQGEISLSRPRVIQILQTFEPILE------MESLCAKTKS-- 581
F H S ++ TF +P+ GE++L P +++Q++ ++ + C
Sbjct: 281 FFHASEDIRKTFEINPIS--GEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVM 338
Query: 582 DLSDRPPEVFFLSVP------SFDSLFSVFAVTMTSFG----MISLVRASLLFKGAKTWV 731
D++D PPEV S+ + ++L ++F++ G MI ++ +L F T+
Sbjct: 339 DINDNPPEVTISSITKRIPENASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFK 398
Query: 732 SFWILVT 752
+F+ LV+
Sbjct: 399 NFFTLVS 405
>AF152493-1|AAD43754.1| 798|Homo sapiens protocadherin beta 14
protein.
Length = 798
Score = 31.5 bits (68), Expect = 3.8
Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Frame = +3
Query: 426 FSHLSRQVKCTFARDPLQLQGEISLSRPRVIQILQTFEPILE------MESLCAKTKS-- 581
F H S ++ TF +P+ GE++L P +++Q++ ++ + C
Sbjct: 281 FFHASEDIRKTFEINPIS--GEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVM 338
Query: 582 DLSDRPPEVFFLSVP------SFDSLFSVFAVTMTSFG----MISLVRASLLFKGAKTWV 731
D++D PPEV S+ + ++L ++F++ G MI ++ +L F T+
Sbjct: 339 DINDNPPEVTISSITKRIPENASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFK 398
Query: 732 SFWILVT 752
+F+ LV+
Sbjct: 399 NFFTLVS 405
>BC117259-1|AAI17260.1| 1581|Homo sapiens LOC200383 protein protein.
Length = 1581
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 500 FPSASHTNSANV*TNTRNGVSLCQNQIRSFR*ATRSFL---LIGTKFRQLIFGFCSYYDF 670
FP NS V G L N R+F T SF ++G K+RQ+IFG C ++
Sbjct: 1064 FPVTVLQNSVKVTNEPPKG--LRANIRRAFTEMTPSFFEENILGKKWRQIIFGICFFHAI 1121
Query: 671 I 673
I
Sbjct: 1122 I 1122
>AB051484-1|BAB21788.2| 2182|Homo sapiens KIAA1697 protein protein.
Length = 2182
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 500 FPSASHTNSANV*TNTRNGVSLCQNQIRSFR*ATRSFL---LIGTKFRQLIFGFCSYYDF 670
FP NS V G L N R+F T SF ++G K+RQ+IFG C ++
Sbjct: 1665 FPVTVLQNSVKVTNEPPKG--LRANIRRAFTEMTPSFFEENILGKKWRQIIFGICFFHAI 1722
Query: 671 I 673
I
Sbjct: 1723 I 1723
>BC023638-1|AAH23638.1| 540|Homo sapiens MPP6 protein protein.
Length = 540
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = -2
Query: 802 KGISENVVVADIPNVHAVTRIQNDTQVLAPLNNNDARTNEIIPNEVIVTAKTENKLSKLG 623
KGI EN +V + H R++ D+++ A +NN NEI+ + + EN +G
Sbjct: 26 KGIMENPIVKSLAKAHE--RLE-DSKLEAVSDNNLELVNEILEDITPLINVDENVAELVG 82
Query: 622 TDKKKTSGGLSERSDLVLAQ 563
K+ L E D+V ++
Sbjct: 83 ILKEPHFQSLLEAHDIVASK 102
>AC005084-1|AAQ96847.1| 540|Homo sapiens unknown protein.
Length = 540
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = -2
Query: 802 KGISENVVVADIPNVHAVTRIQNDTQVLAPLNNNDARTNEIIPNEVIVTAKTENKLSKLG 623
KGI EN +V + H R++ D+++ A +NN NEI+ + + EN +G
Sbjct: 26 KGIMENPIVKSLAKAHE--RLE-DSKLEAVSDNNLELVNEILEDITPLINVDENVAELVG 82
Query: 622 TDKKKTSGGLSERSDLVLAQ 563
K+ L E D+V ++
Sbjct: 83 ILKEPHFQSLLEAHDIVASK 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,111,776
Number of Sequences: 237096
Number of extensions: 3161538
Number of successful extensions: 7246
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 6750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7241
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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