Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k19
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 497 e-141
03_01_0034 + 318432-318825,318902-319851 495 e-140
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 495 e-140
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 495 e-140
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 495 e-140
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 494 e-140
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 493 e-140
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 487 e-138
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 242 2e-64
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 238 5e-63
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 237 1e-62
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 235 5e-62
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 138 5e-33
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.8
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 29 3.8
08_02_1008 - 23508377-23508541,23508940-23509116 29 6.6
05_01_0120 - 828834-831143 29 6.6
03_06_0386 + 33555682-33556344,33557138-33557299 29 6.6
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 8.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 497 bits (1226), Expect = e-141
Identities = 225/261 (86%), Positives = 248/261 (95%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 229
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNV
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPPRGLKM+ATF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLV+EYQQYQDATA
Sbjct: 410 EAESNMNDLVAEYQQYQDATA 430
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 495 bits (1221), Expect = e-140
Identities = 225/261 (86%), Positives = 247/261 (94%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNV
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K+ VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLVSEYQQYQDATA
Sbjct: 410 EAESNMNDLVSEYQQYQDATA 430
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 495 bits (1221), Expect = e-140
Identities = 224/261 (85%), Positives = 248/261 (95%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+
Sbjct: 191 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 250
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 251 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 310
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNV
Sbjct: 311 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 370
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 371 KSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 430
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLVSEYQQYQDATA
Sbjct: 431 EAESNMNDLVSEYQQYQDATA 451
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 495 bits (1221), Expect = e-140
Identities = 224/261 (85%), Positives = 248/261 (95%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 229
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNV
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 349
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLVSEYQQYQDATA
Sbjct: 410 EAESNMNDLVSEYQQYQDATA 430
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 495 bits (1220), Expect = e-140
Identities = 223/261 (85%), Positives = 248/261 (95%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+
Sbjct: 350 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLI 409
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 410 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 469
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNV
Sbjct: 470 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNV 529
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPPRGL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 530 KSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 589
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLVSEYQQYQDATA
Sbjct: 590 EAESNMNDLVSEYQQYQDATA 610
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 494 bits (1219), Expect = e-140
Identities = 224/261 (85%), Positives = 247/261 (94%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 229
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNV
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLV+EYQQYQDATA
Sbjct: 410 EAESNMNDLVAEYQQYQDATA 430
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 493 bits (1216), Expect = e-140
Identities = 224/261 (85%), Positives = 247/261 (94%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+
Sbjct: 170 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLI 229
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 230 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 289
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNV
Sbjct: 290 TQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNV 349
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFT
Sbjct: 350 KSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFT 409
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLV+EYQQYQDATA
Sbjct: 410 EAESNMNDLVAEYQQYQDATA 430
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 487 bits (1201), Expect = e-138
Identities = 220/261 (84%), Positives = 245/261 (93%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
+P KVSDTVVEPYNATLSVHQLVEN DE +DNEALYDICFRTLKLT P++GDLNHL+
Sbjct: 186 FPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLI 245
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRAL+VPEL
Sbjct: 246 SATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPEL 305
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
TQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNV
Sbjct: 306 TQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNV 365
Query: 350 KTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 171
K++VCDIPP GL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFT
Sbjct: 366 KSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFT 425
Query: 170 EAESNMNDLVSEYQQYQDATA 108
EAESNMNDLV+EYQQYQDATA
Sbjct: 426 EAESNMNDLVAEYQQYQDATA 446
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 242 bits (593), Expect = 2e-64
Identities = 109/263 (41%), Positives = 164/263 (62%), Gaps = 8/263 (3%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
YP +VS VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+
Sbjct: 172 YPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLI 231
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
S +S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + LSVPE+
Sbjct: 232 SQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEI 291
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 292 TNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGF 351
Query: 350 KTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGE 195
K + PP ++ + I N TA+ E+F RI +F M+ ++AF+HWY GE
Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411
Query: 194 GMDEMEFTEAESNMNDLVSEYQQ 126
GM+E EF+EA ++ L +Y++
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 238 bits (582), Expect = 5e-63
Identities = 108/263 (41%), Positives = 163/263 (61%), Gaps = 8/263 (3%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
YP +VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LV
Sbjct: 172 YPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLV 231
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
S +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + LSV E+
Sbjct: 232 SQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEI 291
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 292 TNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 351
Query: 350 KTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGE 195
K + PP ++ + I N+T++ E+F RI +F M+ ++AF+HWY GE
Sbjct: 352 KCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGE 411
Query: 194 GMDEMEFTEAESNMNDLVSEYQQ 126
GM+E EF+EA ++ L +Y++
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 237 bits (579), Expect = 1e-62
Identities = 108/263 (41%), Positives = 163/263 (61%), Gaps = 8/263 (3%)
Frame = -3
Query: 890 YPVQKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLV 711
YP +VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LV
Sbjct: 172 YPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLV 231
Query: 710 SATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPEL 531
S +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S + LSV E+
Sbjct: 232 SQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEI 291
Query: 530 TQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV 351
T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P
Sbjct: 292 TNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 351
Query: 350 KTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGE 195
K + PP ++ + I N+T++ E+F RI +F M+ ++AF+HWY GE
Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGE 411
Query: 194 GMDEMEFTEAESNMNDLVSEYQQ 126
GM+E EF+EA ++ L +Y++
Sbjct: 412 GMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 235 bits (574), Expect = 5e-62
Identities = 104/259 (40%), Positives = 162/259 (62%), Gaps = 8/259 (3%)
Frame = -3
Query: 878 KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATM 699
K+S VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVI 316
Query: 698 SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQM 519
S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S + SVPE+T +
Sbjct: 317 SSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSV 376
Query: 518 FDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV 339
F+ ++MA CDPRHG+Y+ ++RG + K+V+ + +I+ + + FV+W P K +
Sbjct: 377 FEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGI 436
Query: 338 CDIPPRG--------LKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDE 183
PP ++ + I N TA+ E+F RI +F M+ ++AF+HWY GEGM+E
Sbjct: 437 NYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEE 496
Query: 182 MEFTEAESNMNDLVSEYQQ 126
EF+EA ++ L +Y++
Sbjct: 497 GEFSEAREDLAALEKDYEE 515
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 138 bits (334), Expect = 5e-33
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 11/265 (4%)
Frame = -3
Query: 890 YPVQ-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHL 714
+P Q + SD VV+PYN+ L++ +L N D +DN AL I L L PT+ N L
Sbjct: 172 FPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSL 231
Query: 713 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALSVP 537
VS MS TT LR+PG +N DL L +++P PR HF M G+ PLT R R +V
Sbjct: 232 VSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVL 291
Query: 536 ELTQQMFDAKNMMAACDPRH-----GRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSYFV 372
++ +++ KN+M + R+ +Y+++ + +G + +V E + I+ + F+
Sbjct: 292 DVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFI 351
Query: 371 EWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTG-- 198
EW P +++S + N T+I+ LF + Q+ + +++AFL Y
Sbjct: 352 EW------------GPASIQVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFP 399
Query: 197 --EGMDEMEFTEAESNMNDLVSEYQ 129
E D EF E+ + LV EY+
Sbjct: 400 MFEDNDLSEFDESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 458 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 550
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 568 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVG-- 741
PR N +PG+ + + NG F + + PG R V+ P +V + SP G
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVDE---HSPLPGWM 243
Query: 742 VVSFKVLKQI 771
V S K +K I
Sbjct: 244 VESLKAVKYI 253
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 189 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 290
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>05_01_0120 - 828834-831143
Length = 769
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 635 PLVSANRRSVVLGIASTWSHQTLSLKPNGSSPHTLGLLASKS 760
P +S + S I+S +S + SL P+ SSP +LGL + S
Sbjct: 502 PFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASS 543
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 625 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 735
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 403 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 576
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 577 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 708
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,690,891
Number of Sequences: 37544
Number of extensions: 583531
Number of successful extensions: 1533
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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