Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k16
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0066 - 26113761-26114683,26115031-26115106,26115204-261154... 64 1e-10
07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,400... 56 3e-08
06_01_1005 - 7810210-7810907,7811005-7811080,7811180-7811368,781... 46 5e-05
04_04_0016 - 22167780-22167873,22167978-22168272,22168380-221684... 44 1e-04
05_04_0189 - 18911654-18913207,18913310-18913528,18914034-189143... 40 0.002
02_04_0563 - 23895573-23895614,23896330-23896390,23896901-238970... 40 0.003
07_03_0565 - 19561078-19561425,19562253-19563746 38 0.009
03_05_0691 + 26788372-26788459,26788635-26788703,26789355-267895... 38 0.012
03_01_0251 - 1956985-1957058,1957238-1957361,1957646-1957744,195... 38 0.012
09_04_0711 + 19666277-19666283,19666836-19666954,19667068-196672... 36 0.029
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 34 0.15
01_06_0703 - 31326790-31326894,31327015-31327126,31327324-313274... 34 0.15
03_06_0705 + 35647838-35647850,35647966-35648105,35648439-356488... 33 0.20
03_01_0643 - 4708245-4708355,4708456-4708800,4709124-4709700,470... 33 0.20
12_02_1011 + 25276077-25276143,25276575-25276721,25276855-252769... 33 0.27
07_03_0670 + 20562188-20562923,20564288-20564826,20564967-205654... 32 0.47
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 32 0.62
09_01_0120 + 1839097-1839277,1840315-1840443,1841694-1841833,184... 32 0.62
07_03_1558 - 27722852-27722963,27723191-27723240,27723338-277234... 32 0.62
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 31 0.82
07_03_1285 + 25477542-25477625,25477776-25477832,25477973-254780... 31 1.1
01_06_1215 - 35473524-35473988,35474571-35475386 31 1.1
10_06_0169 + 11420115-11420163,11420922-11421041,11421938-114220... 31 1.4
02_03_0109 - 15333228-15334793,15335255-15335392,15335496-153357... 31 1.4
07_01_0676 + 5062778-5063089,5063912-5064194,5064883-5065976 30 1.9
02_05_1029 + 33614888-33615082,33615184-33615243,33615332-336154... 30 1.9
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 29 3.3
03_06_0028 + 31141652-31141769,31142609-31142733,31143234-311433... 29 3.3
01_07_0008 + 40389744-40389896,40389967-40390048,40390693-403908... 29 3.3
09_04_0318 - 16620177-16620582,16620686-16620765,16620873-166212... 29 4.4
09_02_0473 - 9690050-9690802,9690891-9691423,9692202-9692776,969... 29 4.4
09_01_0116 - 1797740-1797788,1798087-1798166,1798245-1798424,179... 29 4.4
03_03_0196 + 15331604-15331646,15332141-15332260,15334106-153342... 29 4.4
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820 29 4.4
04_04_0710 - 27453135-27453480,27453647-27453726,27453893-274541... 29 5.8
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 7.6
07_03_0431 - 18152041-18152085,18152368-18152685,18152927-181534... 28 7.6
05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16... 28 7.6
>01_06_0066 - 26113761-26114683,26115031-26115106,26115204-26115401,
26115829-26116014,26116292-26116447,26116486-26116731,
26116832-26117149,26117235-26117292,26117472-26117837,
26119300-26119604
Length = 943
Score = 64.1 bits (149), Expect = 1e-10
Identities = 49/174 (28%), Positives = 74/174 (42%)
Frame = -2
Query: 661 GDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXX 482
GDD LL + +K+G + + D+ G ALH+A NE + LLL+ G +PN +D+ G
Sbjct: 585 GDDFLLHQLLKRGMDPNESDNDGHTALHIAASKGNEQCVRLLLEYGADPNARDSEGKV-P 643
Query: 481 XXXXXXXXXXKIAMLLFDHGAKILPRVEPTDTGLFLQFLMMCEPSEEDEKIIRLMIEKGA 302
+ LL + GA + DTGL+ + E D +++ +I G
Sbjct: 644 LWEALCEKHAAVVQLLVEGGADL----SSGDTGLYACIAV----EESDTELLNDIIHYGG 695
Query: 301 LVNDPEAPGRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANTFG 140
VN G ALH A GAD+ + TP+ +A G
Sbjct: 696 DVNRARRDG-TTALHRAVCDGNVQMAELLLEHGADIDKQDGNGWTPRALAEQQG 748
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -2
Query: 667 ELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
E D LL+ I G ++ + G ALH AVC N LLL+ G + + +D G T
Sbjct: 680 EESDTELLNDIIHYGGDVNRARRDGTTALHRAVCDGNVQMAELLLEHGADIDKQDGNGWT 739
>07_01_0542 + 4002542-4003119,4004347-4004404,4004518-4004835,
4005201-4005446,4005550-4005648,4005912-4006097,
4006204-4006401,4006521-4006596,4006721-4007637
Length = 891
Score = 56.4 bits (130), Expect = 3e-08
Identities = 45/177 (25%), Positives = 71/177 (40%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
A GD LL + +K+G + + DH GR ALH+A + NE + LLL+ G + N +D G
Sbjct: 532 ASKGDSFLLHQLLKRGLDPNESDHYGRTALHIAASNGNEQCVRLLLENGADSNSRDPEGR 591
Query: 490 TXXXXXXXXXXXXKIAMLLFDHGAKILPRVEPTDTGLFLQFLMMCEPSEEDEKIIRLMIE 311
+ LL D GA + D + + + + D ++ ++
Sbjct: 592 V-PLWEALCRRHQTVVQLLVDAGADL----SGGDAAPYARVAV----EQNDAALLGEIVR 642
Query: 310 KGALVNDPEAPGRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANTFG 140
G V+ + ALH A + GAD + TP+ VA G
Sbjct: 643 HGGDVSGACSGDGTTALHRAVLDGNVQMARLLLEHGADADAEDVNGLTPRAVAEQGG 699
>06_01_1005 - 7810210-7810907,7811005-7811080,7811180-7811368,
7811507-7811728,7811906-7812004,7812112-7812192,
7812384-7812679,7812777-7813116,7813221-7813284,
7813511-7813735,7816958-7817244
Length = 858
Score = 45.6 bits (103), Expect = 5e-05
Identities = 49/185 (26%), Positives = 70/185 (37%), Gaps = 2/185 (1%)
Frame = -2
Query: 661 GDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXX 482
GD L I+ G + + D+ GR+ LHLA C E + LL GV+ + D G T
Sbjct: 575 GDMHQLKSLIRAGADPKNTDYDGRSPLHLAACKGFEDVVQFLLHEGVDIDLSDKFGNT-P 633
Query: 481 XXXXXXXXXXKIAMLLFDHGAKILPRVEPTDTGLFLQFLMMCEPSEEDEKIIRLMIEKGA 302
++A LLF GAK+ +E + L + D +R + G
Sbjct: 634 LLEAVKQGHDRVATLLFSKGAKL--SLENAGSHL------CTAVARGDTDFVRRALAYG- 684
Query: 301 LVNDPEAP--GRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANTFGCKEA 128
DP A R LH AA GA + T+ TP + G +
Sbjct: 685 --GDPNARDYDHRAPLHIAAAEGLYLMAKLLVDAGASVFATDRWGTTPLDEGRRCGSRTM 742
Query: 127 FQCLK 113
Q L+
Sbjct: 743 VQLLE 747
>04_04_0016 - 22167780-22167873,22167978-22168272,22168380-22168455,
22168665-22168853,22168955-22169176,22169315-22169413,
22169502-22169582,22169753-22170060,22171611-22171950,
22172047-22172110,22172191-22172412,22172865-22173043
Length = 722
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/184 (24%), Positives = 69/184 (37%)
Frame = -2
Query: 661 GDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXX 482
GD L I G + + D+ GR ALH+A E+ + L+ G N N D G
Sbjct: 542 GDIFRLKSLISAGADPSKSDYDGRTALHIAALRGYENIVRFLIQRGANVNSIDRFG-NSP 600
Query: 481 XXXXXXXXXXKIAMLLFDHGAKILPRVEPTDTGLFLQFLMMCEPSEEDEKIIRLMIEKGA 302
+I LL +HGA + +E D G +L ++ + +K++R I
Sbjct: 601 LLQAVKSGHDRITSLLVEHGA--ILNLE--DAGGYLCRVVRGGRIDLLKKLLRFGISPNC 656
Query: 301 LVNDPEAPGRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANTFGCKEAFQ 122
D P LH AA GAD+ + TP + K +
Sbjct: 657 RNYDQRTP-----LHIAAAEGLHLVASTLIESGADIQAKDRWGNTPLDEGRRCSSKPLVR 711
Query: 121 CLKE 110
L++
Sbjct: 712 ILEQ 715
>05_04_0189 -
18911654-18913207,18913310-18913528,18914034-18914367,
18914425-18914592,18914633-18914724,18914814-18914848,
18915377-18915441,18915565-18915669,18916373-18916434,
18916732-18916860,18918050-18918184,18918336-18918457,
18918808-18918965,18919215-18919372,18919447-18919780,
18919853-18919978,18920213-18920443,18920520-18920692
Length = 1399
Score = 40.3 bits (90), Expect = 0.002
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 6/179 (3%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSD-NEHAITLLLDAGVN----PNHK 506
A G + + + G + +D G + LH+AV + AI LL + G PN
Sbjct: 279 AHHGQPECMRELLMAGADPNAIDGEGESILHIAVAKRYTDCAIVLLENGGCRSMGIPNSV 338
Query: 505 DNVGM-TXXXXXXXXXXXXKIAMLLFDHGAKILPRVEPTDTGLFLQFLMMCEPSEEDEKI 329
+ + + + + A+ + P T L + + E +E ++
Sbjct: 339 NKTPLHLCIKTWNADVVKRWVEVASEEEIAEAIDVPSPVGTALCMAAALKKEHEKEGREL 398
Query: 328 IRLMIEKGALVNDPEAPGRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVA 152
+R+++ GA + P R ALH AAM G D+++ N ++ TP VA
Sbjct: 399 VRVLLSAGADPTAQDDPHCRTALHTAAMINDAELVKIILEAGVDVNIRNAQNTTPLLVA 457
>02_04_0563 -
23895573-23895614,23896330-23896390,23896901-23897025,
23897217-23897302,23898052-23898167,23898274-23898336,
23898451-23898530,23898751-23898871,23899419-23899501,
23900081-23900155,23900436-23900936
Length = 450
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 661 GDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
GD +++ ++ G ++ +D GR A+H+A C + LLL N N +D G T
Sbjct: 110 GDVAGVEELLRDGVDVDSIDLDGRTAMHIAACEGQGEVVRLLLSWKANMNARDRWGST 167
>07_03_0565 - 19561078-19561425,19562253-19563746
Length = 613
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/70 (31%), Positives = 28/70 (40%)
Frame = -2
Query: 325 RLMIEKGALVNDPEAPGRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANT 146
RL ++ + PG ALH A GAD +L NH TP + A
Sbjct: 73 RLAASVSGALDRRDVPGGDTALHLAVRLRLPSLASALAAAGADPTLQNHAGWTPLQEALC 132
Query: 145 FGCKEAFQCL 116
GCK+ CL
Sbjct: 133 LGCKDIAACL 142
>03_05_0691 +
26788372-26788459,26788635-26788703,26789355-26789528,
26790347-26790478,26791730-26791869,26791966-26792073,
26792222-26792347,26792569-26792733,26793085-26793186,
26794519-26794689,26794773-26794852,26795130-26795193
Length = 472
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -2
Query: 619 NIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXXXXXXXXXXXXKIAM 440
N + D LG L AV A+ LD G +PN +DN+G T +A
Sbjct: 103 NAEASDDLGMTPLACAVSKGKAIAVRYFLDKGADPNKQDNIGFT-PLHYATKEGYDGLAR 161
Query: 439 LLFDHGAKI 413
LL GA +
Sbjct: 162 LLLSKGASV 170
>03_01_0251 -
1956985-1957058,1957238-1957361,1957646-1957744,
1957821-1957919,1958097-1958195,1958306-1958404,
1958744-1958820,1959232-1959952
Length = 463
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/61 (36%), Positives = 27/61 (44%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
A GD LLD +K N+ +D G A+H A+ S I LL NP D G
Sbjct: 276 AASGDFYLLDNLLKHNINVNALDKDGLPAIHKAILSKKHAIINYLLRNSANPFIHDKDGA 335
Query: 490 T 488
T
Sbjct: 336 T 336
>09_04_0711 +
19666277-19666283,19666836-19666954,19667068-19667277,
19667362-19667510,19667588-19667759,19668323-19668415,
19668522-19668661,19668752-19668851
Length = 329
Score = 36.3 bits (80), Expect = 0.029
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
A +GD L K ++ G ++ + D GR ALH A +LL+AG N D
Sbjct: 213 ASVGDAEGLKKALEDGADMDEEDAEGRRALHFACGYGELKCAEILLEAGAAVNALDKNKN 272
Query: 490 TXXXXXXXXXXXXKIAMLLFDHGAKILPR 404
T + +LL HGA + P+
Sbjct: 273 TPLHYAAGYGRKECVDLLL-KHGAAVTPQ 300
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 649 LLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
+++ ++ G N+ +D GR LH + LLL G NP D G T
Sbjct: 655 MVELLLQYGANVNAIDSRGRTPLHQCILKGRHIHAKLLLSRGANPQVADQDGRT 708
>01_06_0703 -
31326790-31326894,31327015-31327126,31327324-31327445,
31327573-31327658,31327783-31327901,31327991-31328053,
31328142-31328221,31328801-31328921,31329040-31329125,
31329318-31329413,31329510-31329584,31329869-31330210
Length = 468
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
A GD + + + G + D GR A+H+A C + LLL G + +D G
Sbjct: 54 AHEGDVEGIQELLDAGADPNFRDSDGRTAMHIAACEGQAEVVELLLQRGADAVAEDQWGS 113
Query: 490 TXXXXXXXXXXXXKIAMLLFDHGAKI 413
T I +L HG+K+
Sbjct: 114 TPLADALHYQNHDVI-KILEKHGSKL 138
>03_06_0705 +
35647838-35647850,35647966-35648105,35648439-35648824,
35648930-35649110,35649498-35649590,35649667-35649806,
35649906-35650005
Length = 350
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/86 (29%), Positives = 37/86 (43%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
A +GD L K +++G + + D GR LH A +LL+AG + D
Sbjct: 234 ASVGDVEGLKKALEEGVDKDEEDSEGRRGLHFACGYGELKCAQVLLEAGAAVDAVDKNKN 293
Query: 490 TXXXXXXXXXXXXKIAMLLFDHGAKI 413
T +A+LL DHGA +
Sbjct: 294 TALHYAAGYGRKDCVALLL-DHGAAV 318
>03_01_0643 -
4708245-4708355,4708456-4708800,4709124-4709700,
4709780-4710462,4710618-4710980,4712199-4712530,
4712856-4713048,4713748-4713790,4713964-4714052,
4714186-4714301,4714816-4714935,4715538-4715577
Length = 1003
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -2
Query: 649 LLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
LL K G+ +D G+ LHLA + AI + AGVN N +D G T
Sbjct: 597 LLHKVGDGGKGPSMLDEEGQGVLHLAAALGYDWAIRPTIAAGVNINFRDAHGWT 650
>12_02_1011 +
25276077-25276143,25276575-25276721,25276855-25276986,
25277130-25277269,25277481-25277567,25277776-25277904,
25278493-25278645,25278891-25278992,25279507-25279677,
25279773-25279852,25280491-25280524
Length = 413
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDN 500
AE G D + + +G ++ +++ G LHLA D A+ +LL+ G +PN N
Sbjct: 113 AENGHDEAVRLLLSKGVHVDPLNYRGA-PLHLAASKDRVQAMKVLLEHGADPNRVVN 168
>07_03_0670 +
20562188-20562923,20564288-20564826,20564967-20565458,
20566803-20567018
Length = 660
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = -2
Query: 607 MDHLGRNALHLAVCSDNEHAITLLL-DAGVNPNHKDNVGMT 488
MD+ G ALHLAV + ++ ++LL+ + V PN +N G+T
Sbjct: 368 MDYEGNTALHLAVKNADQMIVSLLMANKAVLPNIVNNQGLT 408
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 31.9 bits (69), Expect = 0.62
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 670 AELGDDILLDKYI-KQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVG 494
A+ G L I K G + + +D+ GR+ LH A N I LLL N +D G
Sbjct: 147 AQYGQTAFLHHIISKYGADFECLDNDGRSPLHWAAYKGNADTIRLLLFMDANQVRQDKNG 206
Query: 493 MT 488
T
Sbjct: 207 CT 208
>09_01_0120 +
1839097-1839277,1840315-1840443,1841694-1841833,
1842291-1842419,1845311-1845463,1845803-1845904,
1846797-1846976,1847070-1847149,1847413-1847442,
1847958-1848057
Length = 407
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 652 ILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
ILLD + G ++ D G + +A + LLDAG NPN D G+
Sbjct: 143 ILLDHHADAGADVNFRDSNGATYVMMAANYGFSGIMKCLLDAGANPNIPDQFGV 196
>07_03_1558 -
27722852-27722963,27723191-27723240,27723338-27723406,
27723507-27723571,27724058-27724145,27724294-27724362
Length = 150
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -2
Query: 331 IIRLMIEKGALVNDPEAPGRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVA 152
+++ +I+ GA VN + + LH+A ++ GA +S N ++TP + A
Sbjct: 65 VVQYLIQNGANVNATNSE-KNTPLHWACLNGHIEVIKALICAGASVSALNSHEKTPMDEA 123
Query: 151 NTFGCKEAFQCL 116
T G E +
Sbjct: 124 VTKGKMEVIDAI 135
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 31.5 bits (68), Expect = 0.82
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -2
Query: 631 KQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXXXXXXXXXXXX 452
K G +I + G ALHLA ++ + LLDAG +P+ +D
Sbjct: 49 KSGGSIDGRNVFGLCALHLATWRNHLPIVRRLLDAGADPDARDGESGWSSLHRALHFGHL 108
Query: 451 KIAMLLFDHGAKI 413
+A +L GA +
Sbjct: 109 CVASVLLQFGASL 121
>07_03_1285 +
25477542-25477625,25477776-25477832,25477973-25478040,
25478187-25478391,25478429-25478586,25478865-25478940,
25479065-25479124,25479186-25479236,25479663-25479741,
25480183-25480271
Length = 308
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 661 GDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
GD + K + QG + D G LHLA + +L+D G N K+ G T
Sbjct: 225 GDIKAVKKLLSQGVDSNYCDKQGFALLHLAALFNQTEIALILMDNGANIQSKNGQGET 282
>01_06_1215 - 35473524-35473988,35474571-35475386
Length = 426
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 271 RQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANTFGCKEAFQCLK 113
R ALH AA + +GAD + T+ R TP +VA G +E L+
Sbjct: 228 RTALHVAAAAGEAEAAAALVDMGADAAATDARGRTPLDVAREKGYQEVVDVLE 280
>10_06_0169 +
11420115-11420163,11420922-11421041,11421938-11422053,
11422125-11422213,11422413-11422455,11423296-11423440,
11423581-11423688,11423767-11424086,11424255-11424671,
11424776-11425470,11425564-11426107,11426338-11426682,
11426799-11426909
Length = 1033
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -2
Query: 649 LLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
LL K G+ +D G LHLA + AI + AGVN N +D G T
Sbjct: 638 LLHKVGDGGKGPSVLDDEGLGVLHLAAALGYDWAIRPTVTAGVNINFRDFHGWT 691
>02_03_0109 -
15333228-15334793,15335255-15335392,15335496-15335771,
15336357-15336422,15338140-15338487
Length = 797
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 595 GRNALHLAVCSDNEHAITLLLDAGVNP 515
GRN L A+ N +A+++LL+AG NP
Sbjct: 344 GRNLLCHAILCQNPNAVSVLLNAGANP 370
>07_01_0676 + 5062778-5063089,5063912-5064194,5064883-5065976
Length = 562
Score = 30.3 bits (65), Expect = 1.9
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = -2
Query: 613 QQMDHLGRNALHLAVCSDNEHAITLLLDAGVNP----NHKDNVGMTXXXXXXXXXXXXKI 446
+ +D GRNA+H+AV S A+ LL V P N DN G T
Sbjct: 282 EMLDREGRNAVHVAVSSGKVDALRCLL-GRVRPAEVVNRGDNSGDTPLHLAAKMARIKSA 340
Query: 445 AMLLFDHGAKILPRVEP 395
MLL D PRV+P
Sbjct: 341 LMLLRD------PRVDP 351
>02_05_1029 +
33614888-33615082,33615184-33615243,33615332-33615403,
33615484-33615659,33615749-33615909,33616122-33616180,
33616269-33616315,33616449-33616589,33616838-33616929,
33616977-33616984
Length = 336
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = -2
Query: 277 GRRQALHFAAMSXXXXXXXXXXXLGADLSLTNHRDETPKEVANTFGCKEAFQCLKELDCD 98
GR LH+AA G +++L N+R +T A +G E Q L + +
Sbjct: 50 GRNSPLHYAAAQGHHEIVSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNAN 109
Query: 97 FVRECLDTLNEIDEIS*HCLFGH 29
R D LN + L GH
Sbjct: 110 VHR--TDYLNGGSALHFAALHGH 130
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQM-DHLGRNALHLAVCSDNEHAI 545
A G ++D+ +K+ N ++ D GRN LH+AV S+ E +
Sbjct: 612 AMFGRTKIIDELVKKCPNYYELVDDKGRNLLHIAVESEQEMVV 654
>03_06_0028 +
31141652-31141769,31142609-31142733,31143234-31143380,
31143750-31143884
Length = 174
Score = 29.5 bits (63), Expect = 3.3
Identities = 34/146 (23%), Positives = 56/146 (38%)
Frame = -2
Query: 604 DHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXXXXXXXXXXXXKIAMLLFDH 425
D G +H A S I++LLD G N + + G T IA L H
Sbjct: 14 DEEGWAPIHTAASSGKAEIISILLDQGANVDLTTDAGRT-ALHYAASKGRLNIAETLIAH 72
Query: 424 GAKILPRVEPTDTGLFLQFLMMCEPSEEDEKIIRLMIEKGALVNDPEAPGRRQALHFAAM 245
A + + + T L S + ++ +IE+GA V+ + G+ +H A +
Sbjct: 73 SANVNKKDKFGCTPLHR------AASTGNAELCEFLIEEGADVDAVDKTGQTPLMH-AVI 125
Query: 244 SXXXXXXXXXXXLGADLSLTNHRDET 167
S GAD+++ + T
Sbjct: 126 SEDKAVALLLVRHGADVAIEDKEGYT 151
>01_07_0008 +
40389744-40389896,40389967-40390048,40390693-40390808,
40391107-40391195,40391859-40391904,40392248-40392716,
40392825-40392952,40393182-40393253,40393512-40393885,
40394005-40394545,40394653-40394952,40395167-40395268
Length = 823
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -2
Query: 670 AELGDDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAG 524
A LG + L + G + D G ALH A E + LLLDAG
Sbjct: 473 AALGYNWALKLLLNSGVLVNYRDANGWTALHWAARFGREETVVLLLDAG 521
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/89 (24%), Positives = 35/89 (39%)
Frame = -2
Query: 658 DDILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMTXXX 479
++ L KY + E + +H A+ LLL++GV N++D G T
Sbjct: 444 EEWLFSKYEQNSEGNHFLPRQYHGVIHTIAALGYNWALKLLLNSGVLVNYRDANGWTALH 503
Query: 478 XXXXXXXXXKIAMLLFDHGAKILPRVEPT 392
+ +LL D GA +PT
Sbjct: 504 WAARFGREETVVLLL-DAGAAAGALSDPT 531
>09_04_0318 -
16620177-16620582,16620686-16620765,16620873-16621213,
16621298-16621559
Length = 362
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 196 LSLTNHRDETPKEVANTFGCKEAFQCLK--ELDCDFVRECLDTLNE 65
L+L + P++V F + A LK E+DC++++ C +TL E
Sbjct: 205 LALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTE 250
>09_02_0473 -
9690050-9690802,9690891-9691423,9692202-9692776,
9693476-9693507
Length = 630
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 622 ENIQQMDHLGRNALHLAVCSDNEHAITLLL-DAGVNPNHKDNVGMT 488
E + D+ G ALHLAV +E+ T LL + V NH + G T
Sbjct: 317 ETLNLEDNDGNTALHLAVKKRDEYIFTYLLQNKAVELNHVNLEGYT 362
>09_01_0116 -
1797740-1797788,1798087-1798166,1798245-1798424,
1799223-1799324,1801026-1801178,1801804-1801932,
1802791-1802930,1803941-1804066,1805792-1805963
Length = 376
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 652 ILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
ILL+ + G ++ D G + +A + + LLDAG NPN D T
Sbjct: 139 ILLEHHADVGADMNFRDSNGVTCVMVAANHGSSVIMKCLLDAGANPNIPDEFNTT 193
>03_03_0196 +
15331604-15331646,15332141-15332260,15334106-15334221,
15334661-15334749,15334885-15334927,15335567-15335741,
15335840-15335971,15336046-15336383,15336791-15337129,
15337293-15337975,15338228-15338807,15339356-15339679,
15340149-15340262
Length = 1031
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 631 KQGENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGMT 488
++G NI + G+ +HLA + AI +L AGVN N +D G T
Sbjct: 638 EKGPNILGKE--GQGIIHLAAALGFDWAIRPILVAGVNVNFRDAHGWT 683
>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
Length = 292
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 196 LSLTNHRDETPKEVANTFGCKEAFQCLK--ELDCDFVRECLDTLNE 65
++L + P++V F + A LK E+DC+F++ C +TL E
Sbjct: 155 VALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTE 200
>04_04_0710 -
27453135-27453480,27453647-27453726,27453893-27454107,
27454227-27454329
Length = 247
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 166 PKEVANTFGCKEAFQCLK--ELDCDFVRECLDTLNE 65
P++V F + A LK E+DC+F++ C +TL E
Sbjct: 120 PRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTE 155
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -2
Query: 670 AELGD-DILLDKYIKQGENIQQMDHLGRNALHLAVCSDNEHAITLLL 533
A++G D++ D + ++ + +D+ GRN LHLA+ +E ++ +L
Sbjct: 347 AKMGHLDVIQDMLKECPDSAELVDNEGRNILHLAIERGHEPVVSYIL 393
>07_03_0431 -
18152041-18152085,18152368-18152685,18152927-18153482,
18153886-18154577,18155234-18155614,18156159-18156241,
18156618-18156786,18157498-18157543,18158301-18158389,
18158476-18158591,18159137-18159443
Length = 933
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 625 GENIQQMDHLGRNALHLAVCSDNEHAITLLLDAGVNPN 512
G ++ D G ALH A E + LL AG NP+
Sbjct: 606 GFSLDFRDSSGWTALHWAAYHGRERMVATLLSAGANPS 643
>05_01_0024 -
164618-165139,166884-166949,167046-167216,167321-167422,
167538-167600,167679-167825,168234-168359,168742-168921,
169183-169322,169688-169861,170096-170123
Length = 572
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 595 GRNALHLAVCSDNEHAITLLLDAGVNPNHKDNVGM 491
G LH+A N I LL AG +PN D+ G+
Sbjct: 185 GATPLHIAADGGNMEIINCLLKAGSDPNACDDDGL 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,834,845
Number of Sequences: 37544
Number of extensions: 353006
Number of successful extensions: 887
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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