Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k11
(480 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 23 2.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 3.0
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 3.0
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 22 3.0
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 22 3.0
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 22 3.9
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 22 3.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 3.9
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 5.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 5.2
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 6.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.1
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +3
Query: 174 SLTSGNWKGANTLPSKCFLYCVHRHF 251
++ +G W L KC++YC+ F
Sbjct: 57 AVRNGQWPETRQL--KCYMYCLWEQF 80
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 472 VIFL*KYFYFYME 434
+++L KYFY +ME
Sbjct: 532 MVYLQKYFYLFME 544
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.2 bits (45), Expect = 3.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 472 VIFL*KYFYFYME 434
+++L KYFY +ME
Sbjct: 532 MVYLQKYFYLFME 544
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 22.2 bits (45), Expect = 3.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 133 ESIHRRTKYGFKLKP 89
E + RR +Y F+LKP
Sbjct: 50 EGLGRRHRYNFQLKP 64
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 22.2 bits (45), Expect = 3.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 133 ESIHRRTKYGFKLKP 89
E + RR +Y F+LKP
Sbjct: 51 EGLGRRHRYNFQLKP 65
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 265 DNELLKCRWTQYKK 224
+N++L WT YKK
Sbjct: 97 NNQILHILWTSYKK 110
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.8 bits (44), Expect = 3.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 265 DNELLKCRWTQYKK 224
+N++L WT YKK
Sbjct: 80 NNQILHILWTSYKK 93
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 3.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +1
Query: 157 SCRSEDLSRRETGRAQTPYPPNVSCTVSI 243
+C +L R QTP+ P+V + I
Sbjct: 761 ACNRSELVEAILKRVQTPFDPDVPIELQI 789
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 5.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 136 SESIHRRTKYGFKLKPG 86
+ESI K GFKLK G
Sbjct: 344 AESILEPAKKGFKLKQG 360
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 5.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 142 LPSESIHRRTKYGFKLKPGP 83
LPS+ ++ +T +G K+ P P
Sbjct: 1243 LPSQLLNIKTLHGLKVIPTP 1262
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 6.9
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 232 YKKHLEGRVFAPFQFPDVRDLHFYNCAIRFLPSESIHRRTKYGFKLKPGPGV 77
+KK E ++F P + P ++++ SE + + T GF L+P G+
Sbjct: 263 FKKMQEEKIFEPHRIPQLQEV-----------SEFLKKNT--GFTLRPAAGL 301
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.6 bits (41), Expect = 9.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 206 HPTLQMFLVLC 238
H TL+ F++LC
Sbjct: 445 HATLEKFMILC 455
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,537
Number of Sequences: 438
Number of extensions: 3172
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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