Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10k08
         (262 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    22   4.2  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    21   5.6  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    21   9.7  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 74  ITIYXVLHEDMLNSETY 24
           +TIY V   DM  +ETY
Sbjct: 241 LTIYCVKASDMRTNETY 257


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 47  LRAARCKW*CTESRG 91
           L    C W C++SRG
Sbjct: 91  LEQFHCHWGCSDSRG 105


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 182 FSLQRFCKIGMNGFFSLFMFCHL 250
           F++QR  + G+ G+     FC L
Sbjct: 221 FNMQRGREFGVPGYMEFRKFCGL 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,524
Number of Sequences: 2352
Number of extensions: 1941
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)