Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10k07
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85033-1|CAA59404.1| 187|Homo sapiens phosphatidylethanolamine ... 93 1e-18
X75252-1|CAA53031.1| 187|Homo sapiens phosphatidylethanolamine ... 93 1e-18
S76773-1|AAD14234.1| 140|Homo sapiens neuropolypeptide h3 protein. 93 1e-18
D16111-1|BAA03684.1| 187|Homo sapiens rat phosphatidylethanolam... 93 1e-18
BC031102-1|AAH31102.1| 187|Homo sapiens phosphatidylethanolamin... 93 1e-18
BC017396-1|AAH17396.1| 187|Homo sapiens phosphatidylethanolamin... 93 1e-18
BC008714-1|AAH08714.1| 187|Homo sapiens phosphatidylethanolamin... 93 1e-18
BC013311-1|AAH13311.1| 346|Homo sapiens mitochondrial ribosomal... 38 0.064
>X85033-1|CAA59404.1| 187|Homo sapiens phosphatidylethanolamine
binding protein protein.
Length = 187
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 111 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 171 AEWDDYVPKLYEQL 184
>X75252-1|CAA53031.1| 187|Homo sapiens phosphatidylethanolamine
binding protein protein.
Length = 187
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 111 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 171 AEWDDYVPKLYEQL 184
>S76773-1|AAD14234.1| 140|Homo sapiens neuropolypeptide h3 protein.
Length = 140
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 64 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 123
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 124 AEWDDYVPKLYEQL 137
>D16111-1|BAA03684.1| 187|Homo sapiens rat phosphatidylethanolamine
binding protein homologue protein.
Length = 187
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 111 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 171 AEWDDYVPKLYEQL 184
>BC031102-1|AAH31102.1| 187|Homo sapiens phosphatidylethanolamine
binding protein 1 protein.
Length = 187
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 111 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 171 AEWDDYVPKLYEQL 184
>BC017396-1|AAH17396.1| 187|Homo sapiens phosphatidylethanolamine
binding protein 1 protein.
Length = 187
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 111 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 171 AEWDDYVPKLYEQL 184
>BC008714-1|AAH08714.1| 187|Homo sapiens phosphatidylethanolamine
binding protein 1 protein.
Length = 187
Score = 93.1 bits (221), Expect = 1e-18
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYE 706
PP+ TGL RYV+L+Y+Q L DEP L+N S D R FK+A F KKY L P+AG Y+
Sbjct: 111 PPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQ 170
Query: 705 AQYDDYVPILYKQL 664
A++DDYVP LY+QL
Sbjct: 171 AEWDDYVPKLYEQL 184
>BC013311-1|AAH13311.1| 346|Homo sapiens mitochondrial ribosomal
protein L38 protein.
Length = 346
Score = 37.5 bits (83), Expect = 0.064
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = -3
Query: 885 PPEKTGLPRYVFLLYKQPSKLTFDE-PRLTNTSSDKRANFKIAEFAKKYNLGDPIAG-NF 712
P +G+ R FLL+KQ + F E R + + F+ +F KK+ AG +F
Sbjct: 225 PARGSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSF 284
Query: 711 YEAQYDDYVPILYKQL 664
++ ++DD V ++ QL
Sbjct: 285 FQCRWDDSVTYIFHQL 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,283,930
Number of Sequences: 237096
Number of extensions: 2403980
Number of successful extensions: 3611
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3611
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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