Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10k06
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   4.9  
CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    23   8.5  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -3

Query: 298  IGNHMRKICILSTHQKKSNNNNNFKTYVSHSQH 200
            +GNH++ +  +      +N  N+++    H QH
Sbjct: 1607 VGNHLQTVADVDIADVPTNRLNHWRLIQKHMQH 1639


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 298 IGNHMRKICILSTHQKKSNNNNN 230
           +GNH ++   ++    K+NNNNN
Sbjct: 80  VGNHQQQPSPVNEGTGKTNNNNN 102


>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 261 VDRIQILRMWLPISPATYSSVEISH 335
           VD +   R W P++ AT   ++I H
Sbjct: 505 VDTLLQSRQWQPVTAATVHYMDIGH 529


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,611
Number of Sequences: 2352
Number of extensions: 14528
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)