Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10j19
         (647 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019865-1|AAH19865.1|  423|Homo sapiens phosphatidylinositol gl...    81   3e-15
BC001803-1|AAH01803.1|  423|Homo sapiens phosphatidylinositol gl...    81   3e-15
AL513302-2|CAH71492.1|  423|Homo sapiens phosphatidylinositol gl...    81   3e-15
AK074655-1|BAC11116.1|  423|Homo sapiens protein ( Homo sapiens ...    81   3e-15
AB028127-1|BAB18567.1|  423|Homo sapiens mannosyltransferase pro...    81   3e-15

>BC019865-1|AAH19865.1|  423|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class M protein.
          Length = 423

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 43/114 (37%), Positives = 58/114 (50%)
 Frame = -2

Query: 574 LFLLSXNYGCDPKTLPFAMFAQAVVLVAYNSVMTSQYFIWFLSLLPLVLKDFKMEPGKIV 395
           L LLS       + L F  F    + V +N V TSQYF+W+L LLPLV+   +M   + V
Sbjct: 299 LILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAV 358

Query: 394 YLVFLWIATQCAWLFFAXQLXFKCXQVFMLIWXXSVMFYGXNVFILTQLIKYYR 233
            L+ LW   Q  WL  A  L F+    F+ IW   + F   N  IL Q+I +Y+
Sbjct: 359 VLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYK 412


>BC001803-1|AAH01803.1|  423|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class M protein.
          Length = 423

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 43/114 (37%), Positives = 58/114 (50%)
 Frame = -2

Query: 574 LFLLSXNYGCDPKTLPFAMFAQAVVLVAYNSVMTSQYFIWFLSLLPLVLKDFKMEPGKIV 395
           L LLS       + L F  F    + V +N V TSQYF+W+L LLPLV+   +M   + V
Sbjct: 299 LILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAV 358

Query: 394 YLVFLWIATQCAWLFFAXQLXFKCXQVFMLIWXXSVMFYGXNVFILTQLIKYYR 233
            L+ LW   Q  WL  A  L F+    F+ IW   + F   N  IL Q+I +Y+
Sbjct: 359 VLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYK 412


>AL513302-2|CAH71492.1|  423|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class M protein.
          Length = 423

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 43/114 (37%), Positives = 58/114 (50%)
 Frame = -2

Query: 574 LFLLSXNYGCDPKTLPFAMFAQAVVLVAYNSVMTSQYFIWFLSLLPLVLKDFKMEPGKIV 395
           L LLS       + L F  F    + V +N V TSQYF+W+L LLPLV+   +M   + V
Sbjct: 299 LILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAV 358

Query: 394 YLVFLWIATQCAWLFFAXQLXFKCXQVFMLIWXXSVMFYGXNVFILTQLIKYYR 233
            L+ LW   Q  WL  A  L F+    F+ IW   + F   N  IL Q+I +Y+
Sbjct: 359 VLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYK 412


>AK074655-1|BAC11116.1|  423|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90174 fis, clone MAMMA1000473, highly similar to
           PIG-M mannosyltransferase. ).
          Length = 423

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 43/114 (37%), Positives = 58/114 (50%)
 Frame = -2

Query: 574 LFLLSXNYGCDPKTLPFAMFAQAVVLVAYNSVMTSQYFIWFLSLLPLVLKDFKMEPGKIV 395
           L LLS       + L F  F    + V +N V TSQYF+W+L LLPLV+   +M   + V
Sbjct: 299 LILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAV 358

Query: 394 YLVFLWIATQCAWLFFAXQLXFKCXQVFMLIWXXSVMFYGXNVFILTQLIKYYR 233
            L+ LW   Q  WL  A  L F+    F+ IW   + F   N  IL Q+I +Y+
Sbjct: 359 VLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYK 412


>AB028127-1|BAB18567.1|  423|Homo sapiens mannosyltransferase
           protein.
          Length = 423

 Score = 81.0 bits (191), Expect = 3e-15
 Identities = 43/114 (37%), Positives = 58/114 (50%)
 Frame = -2

Query: 574 LFLLSXNYGCDPKTLPFAMFAQAVVLVAYNSVMTSQYFIWFLSLLPLVLKDFKMEPGKIV 395
           L LLS       + L F  F    + V +N V TSQYF+W+L LLPLV+   +M   + V
Sbjct: 299 LILLSAVSFAYYRDLVFCCFLHTSIFVTFNKVCTSQYFLWYLCLLPLVMPLVRMPWKRAV 358

Query: 394 YLVFLWIATQCAWLFFAXQLXFKCXQVFMLIWXXSVMFYGXNVFILTQLIKYYR 233
            L+ LW   Q  WL  A  L F+    F+ IW   + F   N  IL Q+I +Y+
Sbjct: 359 VLLMLWFIGQAMWLAPAYVLEFQGKNTFLFIWLAGLFFLLINCSILIQIISHYK 412


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,744,339
Number of Sequences: 237096
Number of extensions: 1217459
Number of successful extensions: 1522
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)