Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10j18
(774 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0492 - 3708379-3708864 102 3e-22
03_06_0269 - 32761354-32761857,32762094-32762190,32762387-327624... 101 8e-22
02_01_0715 - 5346036-5346557 101 8e-22
06_03_0745 + 24109406-24109921 100 3e-21
03_06_0271 - 32773895-32774608 95 4e-20
03_06_0270 - 32768979-32769488 94 1e-19
08_02_0786 + 21198247-21198921 94 1e-19
09_04_0568 + 18591757-18592251 91 9e-19
08_02_1177 + 24946763-24947275 91 9e-19
01_06_0508 - 29897536-29897982 90 2e-18
02_04_0078 + 19507705-19508169 86 3e-17
01_06_0827 + 32260313-32260525,32261862-32262716 81 1e-15
07_01_0496 - 3730822-3731280 81 1e-15
01_06_0505 - 29871692-29872198,29878940-29879359 57 1e-08
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 33 0.33
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 31 1.0
12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730 31 1.3
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 31 1.3
11_01_0196 - 1547373-1549859 31 1.3
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 30 1.8
01_01_0320 - 2578911-2579144,2579243-2579455,2579580-2579858,257... 30 1.8
11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335 30 2.3
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 30 2.3
04_04_1420 + 33441260-33443704 30 2.3
01_01_0381 - 2961422-2963917 29 3.1
03_01_0586 - 4339090-4339194,4340186-4340366,4340531-4340601,434... 29 4.1
09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917 29 5.4
05_05_0299 - 23930657-23932627 29 5.4
12_01_0198 - 1461305-1463812 28 7.2
09_01_0018 - 391827-392254,392553-392608,393976-394005,394666-39... 28 7.2
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 7.2
07_01_1115 - 10297763-10298103,10298396-10298441,10299077-102991... 28 7.2
04_04_1419 - 33433463-33436009 28 7.2
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 28 7.2
01_06_1464 + 37537218-37537387,37537738-37537897,37539521-375397... 28 7.2
12_02_0251 + 16436846-16438237 28 9.5
11_01_0192 - 1523572-1526097 28 9.5
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 28 9.5
06_02_0340 + 14765433-14766167,14768488-14768570,14768890-14768938 28 9.5
03_05_0835 - 28065505-28065656,28066547-28066604,28067535-280676... 28 9.5
>07_01_0492 - 3708379-3708864
Length = 161
Score = 102 bits (245), Expect = 3e-22
Identities = 38/62 (61%), Positives = 52/62 (83%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRC CRKKVGLTGF+CRCGG FC+ HRY++ H+C+FDY++ G +I + NPVV+++KI+
Sbjct: 100 NRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKIN 159
Query: 194 KI 189
KI
Sbjct: 160 KI 161
>03_06_0269 -
32761354-32761857,32762094-32762190,32762387-32762421,
32763035-32763040
Length = 213
Score = 101 bits (241), Expect = 8e-22
Identities = 38/62 (61%), Positives = 52/62 (83%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRC CRKKVGLTGF+CRCGG FC++HRY+D H+C+FDY+++G ++I + NP+V + KI
Sbjct: 152 NRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKIT 211
Query: 194 KI 189
KI
Sbjct: 212 KI 213
>02_01_0715 - 5346036-5346557
Length = 173
Score = 101 bits (241), Expect = 8e-22
Identities = 40/62 (64%), Positives = 48/62 (77%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRCA CRK+VGLTGF CRCG ++CA+HRYSDKHEC FDYR I + NPVV ++K+
Sbjct: 112 NRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLD 171
Query: 194 KI 189
KI
Sbjct: 172 KI 173
>06_03_0745 + 24109406-24109921
Length = 171
Score = 99.5 bits (237), Expect = 3e-21
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRC+ CRK+VGLTGF CRCG L+CA+HRYSDKH+C FDYR I + NPVV ++K+
Sbjct: 110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLD 169
Query: 194 KI 189
KI
Sbjct: 170 KI 171
>03_06_0271 - 32773895-32774608
Length = 237
Score = 95.5 bits (227), Expect = 4e-20
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKI 198
NRCA CR+KVGLTGF+CRCGG FC HRY+D+H C FDY+ G + I + NPVVV+ K+
Sbjct: 175 NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233
>03_06_0270 - 32768979-32769488
Length = 169
Score = 94.3 bits (224), Expect = 1e-19
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKI 198
NRCA CRKKVGLTGF+CRCGG FC HR++D H C FDY+ G ++I + NP+VV+ K+
Sbjct: 107 NRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVADKL 165
>08_02_0786 + 21198247-21198921
Length = 224
Score = 93.9 bits (223), Expect = 1e-19
Identities = 35/61 (57%), Positives = 48/61 (78%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRC CRKKVGL GFECRCGG FC+ HR++DKH C+FD+++ ++I + NP++V+ KI
Sbjct: 163 NRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKIT 222
Query: 194 K 192
K
Sbjct: 223 K 223
>09_04_0568 + 18591757-18592251
Length = 164
Score = 91.1 bits (216), Expect = 9e-19
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKI 198
NRC+ CRK+VGLTGF CRCG LFC HRYSD+H CS+DY+ I R+NPVV + KI
Sbjct: 103 NRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161
>08_02_1177 + 24946763-24947275
Length = 170
Score = 91.1 bits (216), Expect = 9e-19
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKI 198
NRC CR++VGLTGF CRCG L+C HRYSD+H+CSFDY+ I R NPVV + KI
Sbjct: 109 NRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167
>01_06_0508 - 29897536-29897982
Length = 148
Score = 90.2 bits (214), Expect = 2e-18
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
+RCA C + VGL GFECRCG +FC HRYSD+H+C +DYR G I R NPVV K+
Sbjct: 87 SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVRPDKVE 146
Query: 194 KI 189
K+
Sbjct: 147 KL 148
>02_04_0078 + 19507705-19508169
Length = 154
Score = 85.8 bits (203), Expect = 3e-17
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKI 198
+RCA CRK+VGLTGF CRCGG FC HRY ++H C FD++ G I R NP++ K+
Sbjct: 92 SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIKGDKL 150
>01_06_0827 + 32260313-32260525,32261862-32262716
Length = 355
Score = 81.0 bits (191), Expect = 1e-15
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKI 198
NRCA C+KKVGL GF CRCG +C HRY +KH C FD++ I R NP++ +K+
Sbjct: 293 NRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIKGEKL 351
>07_01_0496 - 3730822-3731280
Length = 152
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/62 (56%), Positives = 43/62 (69%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRC CRKKVGL GF CRCGG+FC H C+FDY+ G + I R+NP+VV+ KI+
Sbjct: 97 NRCKACRKKVGLLGFPCRCGGMFCGA------HACAFDYKAAGREAIARHNPLVVAPKIN 150
Query: 194 KI 189
KI
Sbjct: 151 KI 152
>01_06_0505 - 29871692-29872198,29878940-29879359
Length = 308
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYR-ELGAQEIRRNNPVVVSQKI 198
+RCA C ++VGL GFECRCG +FC H + + G I R NPVV + K+
Sbjct: 246 SRCAACGRRVGLMGFECRCGAVFCGAHPLLGQARLWLRLQGRAGRDAIARANPVVSADKV 305
Query: 197 HKI 189
K+
Sbjct: 306 DKL 308
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = -2
Query: 716 DINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDE-------ETEE 558
D+ + DGT V +++L ++ I DS D+ + +E E EE
Sbjct: 486 DLQSKTKEHASDGTSSVLEPEVELSHDGKIREIAMDSADSDLKKDDANELLVALKAEKEE 545
Query: 557 YSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLE 456
+ R QT+ +KE + + R L ++L+
Sbjct: 546 LEAALNREQVQTIQLKEEIAEAEARNAELTKELQ 579
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 588
ER+ E A+ E + ++D SSS N + D + I +DD L++ +
Sbjct: 335 ERQEESEANEEPSNKNQDEGPSSSTSNGKEVEESDDEDINIDDDLDIDELNELEASLSRT 394
Query: 587 RIQDDEETEEYSS 549
IQ E E SS
Sbjct: 395 SIQIREPGEGTSS 407
>12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730
Length = 1072
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = -2
Query: 608 SVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKR 465
S+ +DV+ I DDE EE SSK N TI S++ ++T K +L++
Sbjct: 616 SIPKDVMVISDDEFDEELSSKDDEMN----TIYLSSDPMETTKCTLQK 659
>12_01_0199 -
1467137-1467172,1467302-1467391,1468304-1468396,
1468488-1469515,1470005-1470552,1470656-1470695,
1473774-1475196
Length = 1085
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +2
Query: 338 LVQPSCGKQRICSFSFYPLCPC---HRRHCPT-WRRWCRP 445
++ CG +C +S P+C C + R P+ W R CRP
Sbjct: 299 IIHGVCGANAVCLYSPAPVCVCAPGYARADPSDWSRGCRP 338
>11_01_0196 - 1547373-1549859
Length = 828
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = +2
Query: 353 CGKQRICSFSFYPLCPC---HRR-HCPTWRRWCRP 445
CG +C +S P+C C H R W R CRP
Sbjct: 300 CGANAVCLYSPAPVCVCAPGHERVDASDWSRGCRP 334
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/82 (24%), Positives = 38/82 (46%)
Frame = -2
Query: 707 DSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNT 528
DSS N K + DD+++ R R + ++E + R + D+ E +SK ++
Sbjct: 416 DSSGEANGHAKKEDRRSLLAYDDEVKELRSRVEKLEEMMKRNRKDKAFYEAASKKLKQTR 475
Query: 527 QTVTIKESTNQIQTRKTSLKRK 462
+ + E+T+ T + K K
Sbjct: 476 KALADAEATHASATNAVARKEK 497
>01_01_0320 -
2578911-2579144,2579243-2579455,2579580-2579858,
2579961-2580050,2580258-2580439,2581366-2582470
Length = 700
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -2
Query: 689 NVDGTKGVDPQKIKLDD---KLELSRIRTDSVQEDVLRIQDDEETEE 558
N K +D QK K D +LEL+ I EDV+++ +D++ E+
Sbjct: 416 NASDRKKLDDQKQKAKDDNSELELASIEQQRADEDVMKLVEDQKREK 462
>11_01_0194 + 1539847-1541533,1541650-1541730,1541773-1542335
Length = 776
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +2
Query: 338 LVQPSCGKQRICSFSFYPLCPC---HRRHCPT-WRRWCRP 445
++ CG +C +S P+C C + R P+ W R CRP
Sbjct: 307 IIHGVCGANAVCLYSPAPVCVCAPGYGRAEPSDWSRGCRP 346
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/106 (20%), Positives = 44/106 (41%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 588
E + + SA E I + N D + V + + D+K+E + E+V
Sbjct: 1159 EGKEKMSADHSTAPPKELIKEGEENMNTDNSAAVHVEPVA-DEKMEDEEPDYEEDPEEVE 1217
Query: 587 RIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEE 450
+DDEE +E +++ + + ++ ++ T + K E E
Sbjct: 1218 LYEDDEEMDEAAAEELVEQNEDNLNDKAKQEVTTEEDGNKNTEERE 1263
>04_04_1420 + 33441260-33443704
Length = 814
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +2
Query: 353 CGKQRICSFSFYPLCPCHRRHCPT----WRRWCRPRSP 454
CG ICSF P C C + P W + CR RSP
Sbjct: 295 CGSNGICSFRPGPTCSCPVGYVPNDASDWSKGCR-RSP 331
>01_01_0381 - 2961422-2963917
Length = 831
Score = 29.5 bits (63), Expect = 3.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 353 CGKQRICSFSFYPLCPC 403
CG +CSFS PLC C
Sbjct: 312 CGAFSVCSFSLLPLCSC 328
>03_01_0586 -
4339090-4339194,4340186-4340366,4340531-4340601,
4340689-4340826,4341342-4342337
Length = 496
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = -2
Query: 755 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 576
E ++ENK+ +++ S+ + ++P+ + LDD +S D+ D +
Sbjct: 218 EAKPTLENKAATDE---PDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEY 274
Query: 575 DEETEEYSSKHVRPNTQTVTIKESTN--QIQTRKTSLKRKL 459
DE + + S + + T+K S + T K + R+L
Sbjct: 275 DEPSLQIPSVPIIDESHDTTLKSSLGGPDLSTLKVTELREL 315
>09_04_0143 + 15056435-15056732,15056808-15057417,15057839-15057917
Length = 328
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Frame = -2
Query: 371 RCAVCR----KKVGLTGFECRCGGLFC 303
RC CR K G T CRCG FC
Sbjct: 283 RCPQCRMYVEKSAGCTFMRCRCGFFFC 309
>05_05_0299 - 23930657-23932627
Length = 656
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = -2
Query: 755 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 576
++ +S + S+ + N +GT KI L DK+EL + + + D
Sbjct: 458 QDGSSAAAEGASQKKKGGKDIANGEGTNQKMKGKISLKDKVELEKEMEEYYKLDYEDTIG 517
Query: 575 DEETEEYSSKHVRPNT---QTVTIKESTNQIQTRKTSLKR 465
D +T + K V+PN+ T I S ++ + S+K+
Sbjct: 518 DLKT-RFKYKQVKPNSFGLSTYEILASDDKDLNQYVSMKK 556
>12_01_0198 - 1461305-1463812
Length = 835
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +2
Query: 353 CGKQRICSFSFYPLCPC----HRRHCPTWRRWCRP 445
CG +C +S P+C C R W R C+P
Sbjct: 305 CGANAVCLYSPAPVCVCVPGYARADASDWTRGCQP 339
>09_01_0018 -
391827-392254,392553-392608,393976-394005,394666-394736,
394819-394948,397627-397717,397798-397919,398014-398303
Length = 405
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 578 DDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEE 450
DD T++YS P Q + E++ ++ R+++L+ EEE
Sbjct: 149 DDLLTKDYSCDTALPRIQKRWVLETSGTLEPRRSALEDDFEEE 191
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 79 RQVTCATRPGSRMRNTDSIEHLLRSGGCGG-AARDAAHILCIFWLTTTGL 225
R TC RP S +RN ++ + GCGG + D A C L T GL
Sbjct: 78 RLCTCTGRPSS-LRNLNNSGVSMTCKGCGGESTTDRAGPSCSSKLNTMGL 126
>07_01_1115 -
10297763-10298103,10298396-10298441,10299077-10299101,
10299663-10299718,10299818-10299925
Length = 191
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = -2
Query: 644 DDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKR 465
D +EL+R R+ + + +++ SK + PN + + + TN +++ + KR
Sbjct: 3 DQDIELTRGRSATEACIFQEYGHHADWDKFLSKQIEPNNLAIRLTDQTNTVRSSNGNGKR 62
Query: 464 K 462
K
Sbjct: 63 K 63
>04_04_1419 - 33433463-33436009
Length = 848
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +2
Query: 353 CGKQRICSFSFYPLCPCHRRHCP----TWRRWCR 442
CG+ IC++S P C C + P W + CR
Sbjct: 295 CGRYGICTYSQGPTCSCPDGYVPHDASDWSKGCR 328
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -2
Query: 758 NEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTD-SVQEDVLRI 582
+ E +++S + D ND L++ GTK LD E +++ TD ++E+
Sbjct: 485 SSEGEGSDDESDAFDSNDEKELQSARGTKQ------NLDGSSEANKLDTDEGMKEEDQLS 538
Query: 581 QDDEETEE 558
D+++TEE
Sbjct: 539 GDEDDTEE 546
>01_06_1464 +
37537218-37537387,37537738-37537897,37539521-37539787,
37540541-37540646,37541411-37541678,37541915-37542020,
37542891-37542950,37544349-37544445,37544613-37544803,
37545518-37545583,37545879-37545944,37547510-37547583,
37547910-37548000,37548079-37548236,37548424-37548466,
37548621-37548686,37549113-37549190,37549361-37549453
Length = 719
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 284 DKHECSFDYRELGAQEIRRNNPVVVSQKIHKI 189
D+HE + RE + RRN PV VS K+ +
Sbjct: 208 DQHEANLLAREYCKRVKRRNKPVAVSHKVQTL 239
>12_02_0251 + 16436846-16438237
Length = 463
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Frame = +1
Query: 154 GGCGGAARDAAHIL---C--IFWLTTTGLLRRISCAP 249
GGCG +AR A +L C + LTTTG + R C+P
Sbjct: 355 GGCGASARSAPRLLSVSCTRVVDLTTTG-VHRSPCSP 390
>11_01_0192 - 1523572-1526097
Length = 841
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +2
Query: 353 CGKQRICSFSFYPLCPC---HRRHCP-TWRRWCRP 445
CG +C +S P+C C + R P W R C+P
Sbjct: 305 CGANAVCLYSPAPVCVCVPGYARADPRDWTRGCQP 339
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -2
Query: 755 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 576
EE I +S + D ND+S LR + ++ K D++ + + + +DV +
Sbjct: 210 EEQEEITRRSQAMDKNDTSDLRKFSRQAYLQKRRDKKIDEIRDEILDHEYIFQDVKLTEA 269
Query: 575 DEETEEYSSK 546
+E+ Y K
Sbjct: 270 EEKEFRYKKK 279
>06_02_0340 + 14765433-14766167,14768488-14768570,14768890-14768938
Length = 288
Score = 27.9 bits (59), Expect = 9.5
Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDG----TKGVDPQKIKLDDKLELSRIRTDS 606
KL+ + E +EN E ++ S+ + D T P + + K E+ DS
Sbjct: 98 KLKEKYEVPTLVENGCTQEWMSGEDSISSSDDEELPTPSTSPHCLMTNGKNEVKNDSLDS 157
Query: 605 VQEDVLRIQDDEETEEYSSKH----VRPNTQTVTIKESTNQIQTRKTSLKRK 462
+ E+ + DD + +E S +R ++ + ++ NQI KT L K
Sbjct: 158 IIENTCVVDDDGDDDEPSYDDLFDMLREASKYIAKEKKKNQI-LEKTLLSLK 208
>03_05_0835 -
28065505-28065656,28066547-28066604,28067535-28067642,
28067796-28067855,28067940-28068015,28068470-28068627,
28068787-28068849,28069003-28069142,28070793-28071882
Length = 634
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 632 ELSRIRTDSVQEDVLRIQDDEETEEYSSKHV 540
E S +RTD + D + D EE EE++ + V
Sbjct: 274 EKSEVRTDDERVDASHMSDTEEEEEFADEGV 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,048,201
Number of Sequences: 37544
Number of extensions: 294328
Number of successful extensions: 1065
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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