Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10j18
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-2|CAA95809.1| 189|Caenorhabditis elegans Hypothetical pr... 97 9e-21
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 36 0.032
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 36 0.032
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 36 0.032
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 31 0.91
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 31 0.91
AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical... 30 1.6
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 30 2.1
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 30 2.1
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 30 2.1
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 30 2.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 30 2.1
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 30 2.1
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 30 2.1
Z49967-3|CAA90249.1| 81|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 29 2.8
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z99942-3|CAB17071.2| 585|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81555-4|CAB04515.1| 202|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical p... 29 3.7
AY519854-1|AAR89635.1| 229|Caenorhabditis elegans arsenite indu... 29 3.7
AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical ... 29 3.7
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 4.9
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical pr... 28 6.4
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 8.5
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 8.5
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 8.5
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 8.5
>Z71262-2|CAA95809.1| 189|Caenorhabditis elegans Hypothetical
protein F22D6.2 protein.
Length = 189
Score = 97.5 bits (232), Expect = 9e-21
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = -2
Query: 374 NRCAVCRKKVGLTGFECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVVVSQKIH 195
NRC +C+K+VGLTGF CRCGGL+C HRY H C FDY+ + + IR+NNPVVVS K+
Sbjct: 128 NRCHMCKKRVGLTGFSCRCGGLYCGDHRYDQAHNCQFDYKTMERETIRKNNPVVVSDKVQ 187
Query: 194 KI 189
+I
Sbjct: 188 RI 189
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 371 RCAVCRKKVGLTG--FECRCGGLFCAVHRYSDKHECSFDYRELGAQEIRRNNPVV 213
+C C KK+ C+C +FC HR+ H C DY++ G ++++NN V
Sbjct: 275 KCNTCFKKLSAAQQTMHCKCLRIFCDRHRHPKNHTCVIDYKQDGRNKLKKNNSKV 329
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDK-LELSRIRTDSVQEDV 591
++++ E+ASIE + E + S VD K + QK++ + K + +SV E
Sbjct: 9925 KKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEKP 9984
Query: 590 LRIQDDEETEEYSSKHVRPNTQTVTIKESTNQ--IQTRKTSLKRKLEEE 450
+ ++TE+ S + + T+ ES Q +T+K S K ++
Sbjct: 9985 KKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKAHKQ 10033
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -2
Query: 743 SIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDD--E 570
+IE +E++ S + + D + + +++KL+D E+ I + ED LRI + E
Sbjct: 10378 NIELLHNNENLRTRSDVTDFDDSISIRMKRLKLEDSGEIKIIGKNDSSEDQLRIPINVIE 10437
Query: 569 ETEEYSSKHV-RPNTQTVTI 513
T + +S V +TVT+
Sbjct: 10438 VTSKPTSLQVTSTERETVTL 10457
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDK-LELSRIRTDSVQEDV 591
++++ E+ASIE + E + S VD K + QK++ + K + +SV E
Sbjct: 9945 KKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEKP 10004
Query: 590 LRIQDDEETEEYSSKHVRPNTQTVTIKESTNQ--IQTRKTSLKRKLEEE 450
+ ++TE+ S + + T+ ES Q +T+K S K ++
Sbjct: 10005 KKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKAHKQ 10053
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = -2
Query: 710 NDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPN 531
+DSS + + K D K K DD + S+ T ED ++ D + E+ + +
Sbjct: 12876 SDSSISQKSNVLKPADDDKSKSDDVTDKSKKTT----EDQTKVATDSKLEKAADTTKQIE 12931
Query: 530 TQTVTIKESTNQIQTRKT 477
T+TV +S ++ +KT
Sbjct: 12932 TETVVDDKSKKKVLKKKT 12949
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -2
Query: 743 SIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDD--E 570
+IE +E++ S + + D + + +++KL+D E+ I + ED LRI + E
Sbjct: 10398 NIELLHNNENLRTRSDVTDFDDSISIRMKRLKLEDSGEIKIIGKNDSSEDQLRIPINVIE 10457
Query: 569 ETEEYSSKHV-RPNTQTVTI 513
T + +S V +TVT+
Sbjct: 10458 VTSKPTSLQVTSTERETVTL 10477
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 35.9 bits (79), Expect = 0.032
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDK-LELSRIRTDSVQEDV 591
++++ E+ASIE + E + S VD K + QK++ + K + +SV E
Sbjct: 9945 KKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEKP 10004
Query: 590 LRIQDDEETEEYSSKHVRPNTQTVTIKESTNQ--IQTRKTSLKRKLEEE 450
+ ++TE+ S + + T+ ES Q +T+K S K ++
Sbjct: 10005 KKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKAHKQ 10053
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = -2
Query: 710 NDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPN 531
+DSS + + K D K K DD + S+ T ED ++ D + E+ + +
Sbjct: 12876 SDSSISQKSNVLKPADDDKSKSDDVTDKSKKTT----EDQTKVATDSKLEKAADTTKQIE 12931
Query: 530 TQTVTIKESTNQIQTRKT 477
T+TV +S ++ +KT
Sbjct: 12932 TETVVDDKSKKKVLKKKT 12949
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = -2
Query: 743 SIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDD--E 570
+IE +E++ S + + D + + +++KL+D E+ I + ED LRI + E
Sbjct: 10398 NIELLHNNENLRTRSDVTDFDDSISIRMKRLKLEDSGEIKIIGKNDSSEDQLRIPINVIE 10457
Query: 569 ETEEYSSKHV-RPNTQTVTI 513
T + +S V +TVT+
Sbjct: 10458 VTSKPTSLQVTSTERETVTL 10477
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 31.1 bits (67), Expect = 0.91
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDD--KLELSRIRTDSVQ 600
K++R EE +E +E I ++ + ++++ ++ K+ L R+R +
Sbjct: 1149 KVDRMLEEGLRLEKVREAERIRQQQEEERIEMETILISRRVREEEEEKMRLERLRKAERE 1208
Query: 599 EDVLRIQDDEETEEYSSKHVR--PNTQTVTIKESTNQIQTRKT----SLKRKLEE 453
+ R++ +EE E + +R + KE+ ++Q +T L+RK+EE
Sbjct: 1209 REQERLKREEEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALELERKIEE 1263
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 31.1 bits (67), Expect = 0.91
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDD--KLELSRIRTDSVQ 600
K++R EE +E +E I ++ + ++++ ++ K+ L R+R +
Sbjct: 1149 KVDRMLEEGLRLEKVREAERIRQQQEEERIEMETILISRRVREEEEEKMRLERLRKAERE 1208
Query: 599 EDVLRIQDDEETEEYSSKHVR--PNTQTVTIKESTNQIQTRKT----SLKRKLEE 453
+ R++ +EE E + +R + KE+ ++Q +T L+RK+EE
Sbjct: 1209 REQERLKREEEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALELERKIEE 1263
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 31.1 bits (67), Expect = 0.91
Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDD--KLELSRIRTDSVQ 600
K++R EE +E +E I ++ + ++++ ++ K+ L R+R +
Sbjct: 1149 KVDRMLEEGLRLEKVREAERIRQQQEEERIEMETILISRRVREEEEEKMRLERLRKAERE 1208
Query: 599 EDVLRIQDDEETEEYSSKHVR--PNTQTVTIKESTNQIQTRKT----SLKRKLEE 453
+ R++ +EE E + +R + KE+ ++Q +T L+RK+EE
Sbjct: 1209 REQERLKREEEEERKRLEQLREAEKLKAEIEKENERKLQEERTRKALELERKIEE 1263
>AL132902-10|CAB82002.1| 286|Caenorhabditis elegans Hypothetical
protein Y71A12B.11 protein.
Length = 286
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = -2
Query: 767 ERRNEESASIENKS-GSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDV 591
E +E + E++S G ++ D + GT + + LDD + ++S E
Sbjct: 120 ESESESESEDESESEGFDESEDEEEVPKETGTYAFESKPEALDDSESEASDVSESKDESE 179
Query: 590 LRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEE 450
DD E EEY + T ++ NQ++ + +EEE
Sbjct: 180 SEGSDDSEDEEYVEE---------TCTDALNQLEPESDAADESVEEE 217
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 761 RNEESASIENKSGS-EDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLR 585
++ +S+ EN G +D+ D+ S N + K + K D+K+ + V E +
Sbjct: 82 KSGDSSCFENGKGFFKDVQDAPSKPNNNPKKSKSEKSKKKDEKMTIKDYERKLVLEKGGQ 141
Query: 584 IQDDEETEEYSSKHVR 537
I + +E EY+ R
Sbjct: 142 IDESDEEAEYNKTQQR 157
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 581 QDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLE 456
+D+E+++EYSS+ Q T K NQ +K+ L K +
Sbjct: 1494 RDEEQSDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVEKTQ 1535
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 581 QDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLE 456
+D+E+++EYSS+ Q T K NQ +K+ L K +
Sbjct: 1494 RDEEQSDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVEKTQ 1535
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 734 NKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEY 555
NKSG ++ + ++ K + + +D + LS IR +S ED+ DDEE E
Sbjct: 6711 NKSGEGSVSSLAEFERLE--KEMTENQSPPEDVMMLSDIREESEAEDMSIRDDDEEDAEG 6768
Query: 554 SSKHVR 537
S ++
Sbjct: 6769 SDTELK 6774
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 734 NKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEY 555
NKSG ++ + ++ K + + +D + LS IR +S ED+ DDEE E
Sbjct: 6711 NKSGEGSVSSLAEFERLE--KEMTENQSPPEDVMMLSDIREESEAEDMSIRDDDEEDAEG 6768
Query: 554 SSKHVR 537
S ++
Sbjct: 6769 SDTELK 6774
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 734 NKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEY 555
NKSG ++ + ++ K + + +D + LS IR +S ED+ DDEE E
Sbjct: 586 NKSGEGSVSSLAEFERLE--KEMTENQSPPEDVMMLSDIREESEAEDMSIRDDDEEDAEG 643
Query: 554 SSKHVR 537
S ++
Sbjct: 644 SDTELK 649
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQED 594
K E ++ E K +D D + K D + K DDK E + D +ED
Sbjct: 90 KKEGDEKDEKKDEEKKDGDDKKDEKKDDDKKDEKKSDKKDEKKDDKKEKDEEKKDDKKED 149
Query: 593 VLRIQD-DEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKR 465
+ D ++ +E SK + N + K + +K K+
Sbjct: 150 EKKDDDKKDDKKEAKSKSKKSNKSKKSKKSKREKKDDKKDEDKK 193
>Z49967-3|CAA90249.1| 81|Caenorhabditis elegans Hypothetical
protein F54C9.3 protein.
Length = 81
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -2
Query: 608 SVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSL 471
S ++D +QD + +EYS++ R +TV ++ N + RKT L
Sbjct: 33 SSRKDYETLQDFLKRDEYSAETKRDKFKTVQVQSLDNSYKGRKTDL 78
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/94 (20%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = -2
Query: 755 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 576
+E A E++ S + SS ++ + DP+++ +++ R+ SVQ+ + +
Sbjct: 1341 QEQAVEEDRPPSRNTRSSSVQKSTSQVEDRDPKELVEEERPPSRNTRSASVQKSSNQ-EK 1399
Query: 575 DEETEEYSSKHVRP--NTQTVTIKESTNQIQTRK 480
E+ E + + P NT++ ++++S+++++ +K
Sbjct: 1400 TSESGEVTEEDRPPSRNTRSASVQKSSSKVKDQK 1433
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/103 (17%), Positives = 47/103 (45%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQED 594
KL+ E++ + + + + + D + +D K+ DD++E D++++
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSID-DKMNFDDEIEYLEEMLDNIEKQ 265
Query: 593 VLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKR 465
R +ETE+ + ++ +K ++N+ K+S ++
Sbjct: 266 KDRKGSKDETEDTDATGDEEDSMFEEVKSASNKSGAEKSSAEQ 308
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/103 (17%), Positives = 47/103 (45%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQED 594
KL+ E++ + + + + + D + +D K+ DD++E D++++
Sbjct: 207 KLDAEKEKALAEKRLEREQKLYKDLKSSSDDTSSSID-DKMNFDDEIEYLEEMLDNIEKQ 265
Query: 593 VLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKR 465
R +ETE+ + ++ +K ++N+ K+S ++
Sbjct: 266 KDRKGSKDETEDTDATGDEEDSMFEEVKSASNKSGAEKSSAEQ 308
>Z99942-3|CAB17071.2| 585|Caenorhabditis elegans Hypothetical
protein H13N06.6 protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 631 NFHESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIR 527
N + +PIP+ +T Y + K P T+ NM+ +R
Sbjct: 192 NSNSPDPIPNVETTYKCIIRKMPFDTVNNMYHVVR 226
>Z82072-1|CAB04920.2| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 641 DKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRK 462
+K + + ++ V E ++DEE E + V+ + T+KE + RKT K +
Sbjct: 325 NKQKSQKSKSKPVMEVEYDNEEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEE 384
Query: 461 LEEE 450
E E
Sbjct: 385 EEAE 388
>Z81555-4|CAB04515.1| 202|Caenorhabditis elegans Hypothetical
protein F58E10.4 protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -2
Query: 374 NRCAV--CRKKVGLTGFEC-RCGGLFCAVHRYSDKHECSFDYRELGAQEIRR 228
N C V C+KK L C +C +C HR+ H C R++G +I +
Sbjct: 96 NACTVPKCKKKE-LVAMNCSKCRNNYCLSHRHERDHSCE---RKVGEMKINQ 143
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = -2
Query: 662 PQKIKLDDK-LELSRIRTDSVQEDVLRIQD--DEETEEYSSKHVRPNTQTVTIKESTNQI 492
P + +L +K LE ++T + E++ + Q D + S++H R T T + E Q+
Sbjct: 314 PLEGRLVEKWLEEDELKTAQIHEELTKQQFLLDLLHSKISARHERGRT-TAELDEHAWQV 372
Query: 491 QTRKTSLKRKLEE 453
Q T++KR+L++
Sbjct: 373 QNNITAIKRRLKQ 385
>Z68227-18|CAA92521.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 668 VDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSK-HVRPNTQTVTIKESTNQI 492
+D +K+ + +E + T D+ + DDE EE+++K H + ++ +I
Sbjct: 230 LDDRKLLFAEMVEAEYVGTSRSSTDLNKSSDDEPEEEFATKIHYSSKGIYIHTVQNVRKI 289
Query: 491 QTRKTS 474
++ KTS
Sbjct: 290 RSGKTS 295
>Z68220-11|CAA92493.1| 869|Caenorhabditis elegans Hypothetical
protein F49C12.15 protein.
Length = 869
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -2
Query: 668 VDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSK-HVRPNTQTVTIKESTNQI 492
+D +K+ + +E + T D+ + DDE EE+++K H + ++ +I
Sbjct: 230 LDDRKLLFAEMVEAEYVGTSRSSTDLNKSSDDEPEEEFATKIHYSSKGIYIHTVQNVRKI 289
Query: 491 QTRKTS 474
++ KTS
Sbjct: 290 RSGKTS 295
>AY519854-1|AAR89635.1| 229|Caenorhabditis elegans arsenite
inducible RNA associatedprotein (aip-1) protein.
Length = 229
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -2
Query: 374 NRCAV--CRKKVGLTGFEC-RCGGLFCAVHRYSDKHECSFDYRELGAQEIRR 228
N C V C+KK L C +C +C HR+ H C R++G +I +
Sbjct: 123 NACTVPKCKKKE-LVAMNCSKCRNNYCLSHRHERDHSCE---RKVGEMKINQ 170
>AL032636-6|CAB54421.1| 467|Caenorhabditis elegans Hypothetical
protein W05H12.1 protein.
Length = 467
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 641 DKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRK 462
+K + + ++ V E ++DEE E + V+ + T+KE + RKT K +
Sbjct: 325 NKQKSQKSKSKPVMEVEYDNEEDEEESEEKEEKVKGKSNQKTVKERIRAEEARKTVEKEE 384
Query: 461 LEEE 450
E E
Sbjct: 385 EEAE 388
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -2
Query: 755 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 576
E+ I+N S SE++ +S +V+G+ +P+ + L T S +
Sbjct: 170 EDITKIDNISDSEEVLRVNSENSVEGSGDNEPELM-----TTLETTTTSSKKSSEFTTTM 224
Query: 575 DEETEEYSSKHVRPNTQTVTIK-ESTNQIQTRKTSLK 468
E+ ++ +P T+ +T ST+ T KTS K
Sbjct: 225 TPESSSVTTTTAKPVTEPITTSTSSTSATTTLKTSSK 261
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical
protein C27B7.4 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -2
Query: 614 TDSVQEDVLRI-QDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRK 462
++ + E+ ++ Q++EE +E K +P+ Q + QT+K SLKRK
Sbjct: 2 SEEIDENTMKEEQEEEERDEIEEKEEKPDAQQQELLNIRIPTQTKK-SLKRK 52
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQ--ED 594
E EES+ E+ SE+ S S + + +K K +DK + + + D Q ED
Sbjct: 263 EPSTEESS--ESPETSEEPQSSESTPTSEESTEQSTEKPKKEDKKD-KKDKKDKKQKKED 319
Query: 593 VLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKT 477
DD++++ SS + + ++ + +S+++ + KT
Sbjct: 320 SEEDDDDKKSKSSSSSDSKTDEKSTSESDSSSEASSEKT 358
>Z82286-3|CAB05309.1| 781|Caenorhabditis elegans Hypothetical
protein W02A2.6 protein.
Length = 781
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Frame = -2
Query: 767 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 588
E+R E S E + + L + + ++ + + L + +RTD ++ED
Sbjct: 620 EKRRETSIIAELNLDPIPVEEIDPLLTMRTEEELENVRRRQKSSLGVQFMRTDDLEEDTR 679
Query: 587 R---IQDDEETEE--------YSSKHVRPNTQTVTIKESTNQIQTR 483
R +D+E T + YSS + PN + KE N+ + R
Sbjct: 680 RNRLFEDEERTRDAREDELFFYSSGSLLPNNRLNIHKELLNEAEAR 725
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 689 NVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEET 564
NVDGT+ +++++++L+LS R E + + D+E T
Sbjct: 543 NVDGTQKKLDMELEIEEELDLSGYRGHGKLEHEIALPDEEPT 584
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 622 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 518
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 755 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 789
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 622 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 518
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 753 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 787
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 622 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 518
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 755 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 789
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 622 ESEPIPSKKTCYAFKMMKKPKSTLQNMFDPIRKPL 518
ESEP P+KKT + K +K+P+ + P P+
Sbjct: 753 ESEPEPAKKTKRSLKKVKEPEPEPEEYEQPTPVPV 787
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 371 CSFSFYPLCPCHRRHCPTWRRWC 439
C + Y PC+ C TW WC
Sbjct: 487 CQGADYETEPCNLGPCQTWSEWC 509
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
protein C34E10.8 protein.
Length = 1024
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = -2
Query: 722 SEDINDSSSLRNVDGTKGVDPQKIKLD-------DKLELSRIRTDSVQEDVLRIQDDEET 564
++DI D++SLR + D IK+D D +E + T Q++ + +DEE
Sbjct: 127 NDDILDNNSLRYAEYYTDKDILNIKMDLVQKDIDDLIEFKELVTSQAQKEHELLGNDEE- 185
Query: 563 EEYSSKHVRPNTQTVTIKESTNQIQTRKT 477
E+Y + + + K S N T T
Sbjct: 186 EDYPTDMAQRRIFKASTKYSRNDYLTLTT 214
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/108 (20%), Positives = 43/108 (39%)
Frame = -2
Query: 773 KLERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQED 594
K E + EE + + E D D K + K +DK E + + D +ED
Sbjct: 89 KKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKED 148
Query: 593 VLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEE 450
+DD++++ K + KE + + + ++K E++
Sbjct: 149 K---KDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKK 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,723,127
Number of Sequences: 27780
Number of extensions: 250844
Number of successful extensions: 1192
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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