Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10j17
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 33 0.18
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 33 0.18
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 33 0.18
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 33 0.18
Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.56
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP transcri... 29 3.9
AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP transcri... 29 3.9
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 3.9
AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal ever... 29 3.9
AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal ever... 29 3.9
Z81516-1|CAB04203.1| 521|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81146-4|CAB03525.1| 501|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical pr... 28 6.9
U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin (dro... 28 6.9
Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 28 9.1
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 28 9.1
AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical ... 28 9.1
AC084159-8|AAK39361.2| 655|Caenorhabditis elegans Hypothetical ... 28 9.1
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -3
Query: 606 EDFDCSKSESKVLHEESRFIKFIESNAFIPFIDSDN--SKNSTFDYIVRPIDVHVQPQVI 433
E S K L E ++FIE++ I +S++ NST ++ I+ H++ V+
Sbjct: 323 EPTQSSSETEKNLQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLESDVV 382
Query: 432 FDANITRKAIGDKLTKKSTKH 370
+ + +K+ + ST H
Sbjct: 383 IENGSESSFVNEKMNEASTAH 403
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -3
Query: 606 EDFDCSKSESKVLHEESRFIKFIESNAFIPFIDSDN--SKNSTFDYIVRPIDVHVQPQVI 433
E S K L E ++FIE++ I +S++ NST ++ I+ H++ V+
Sbjct: 323 EPTQSSSETEKNLQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLESDVV 382
Query: 432 FDANITRKAIGDKLTKKSTKH 370
+ + +K+ + ST H
Sbjct: 383 IENGSESSFVNEKMNEASTAH 403
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -3
Query: 606 EDFDCSKSESKVLHEESRFIKFIESNAFIPFIDSDN--SKNSTFDYIVRPIDVHVQPQVI 433
E S K L E ++FIE++ I +S++ NST ++ I+ H++ V+
Sbjct: 323 EPTQSSSETEKNLQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLESDVV 382
Query: 432 FDANITRKAIGDKLTKKSTKH 370
+ + +K+ + ST H
Sbjct: 383 IENGSESSFVNEKMNEASTAH 403
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -3
Query: 606 EDFDCSKSESKVLHEESRFIKFIESNAFIPFIDSDN--SKNSTFDYIVRPIDVHVQPQVI 433
E S K L E ++FIE++ I +S++ NST ++ I+ H++ V+
Sbjct: 323 EPTQSSSETEKNLQNEKIDVEFIENSEAIVQNESEDVPESNSTSGTVLENIEDHLESDVV 382
Query: 432 FDANITRKAIGDKLTKKSTKH 370
+ + +K+ + ST H
Sbjct: 383 IENGSESSFVNEKMNEASTAH 403
>Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical
protein F17A2.9 protein.
Length = 316
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 268 FSVSIFIMSTKTFLHGIFRCFVFKMYILKRDYSFVFCTFLCQFIS 402
F ++ FI+ T + GIF F LK F+ C +CQ IS
Sbjct: 9 FYITFFILVLPTQIFGIFVILRFSTKHLKLWKKFLLCNLICQIIS 53
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 711 DRAKTKMLNDQANTHWKFAEVPNLTXESNLTINEIEDFDCSKSESKVLH-EESRFIKFIE 535
D ++D+ T WK L ++N+ +NE E S H ++ F+ ++
Sbjct: 190 DECNKFKISDEKLTKWKLVAQETLKDDANIAVNEFE----KVSGYLPPHISKNHFVSNMD 245
Query: 534 SNAFIPFIDSDNSK 493
N F+ I D+S+
Sbjct: 246 KNRFVDVICMDHSR 259
>AY835433-1|AAX37360.1| 331|Caenorhabditis elegans bZIP
transcription factor FOS-1b protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 690 LNDQANTH-WKFAEVPNLTXESNLTINEIEDFDCSKSESKVLHEESRFI 547
+ND N++ K AE N+ + N N +E DC S + HE +R I
Sbjct: 59 VNDFKNSNDKKMAECNNIRNKLNSLKNYLETHDCKLSREERTHEINRLI 107
>AY835432-1|AAX37359.1| 467|Caenorhabditis elegans bZIP
transcription factor FOS-1a protein.
Length = 467
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 690 LNDQANTH-WKFAEVPNLTXESNLTINEIEDFDCSKSESKVLHEESRFI 547
+ND N++ K AE N+ + N N +E DC S + HE +R I
Sbjct: 195 VNDFKNSNDKKMAECNNIRNKLNSLKNYLETHDCKLSREERTHEINRLI 243
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 477 YIVRPIDVHVQPQVIFDANI--TRKAIGDKLTKKSTKHKRIITFKNIHFKYKTPKYTMEK 304
YI + VH +F N+ T G +++K + ++ITFK+I ++TM +
Sbjct: 262 YITNELFVHTNSHRVFAMNMNPTHLIGGRPISEKPYRKWQVITFKHIDRGCTATRHTMLR 321
Query: 303 RFSTHYKN 280
R Y++
Sbjct: 322 REKMPYED 329
>AF016440-2|AAB65905.2| 331|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform a protein.
Length = 331
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 690 LNDQANTH-WKFAEVPNLTXESNLTINEIEDFDCSKSESKVLHEESRFI 547
+ND N++ K AE N+ + N N +E DC S + HE +R I
Sbjct: 59 VNDFKNSNDKKMAECNNIRNKLNSLKNYLETHDCKLSREERTHEINRLI 107
>AF016440-1|ABA54419.1| 467|Caenorhabditis elegans Abnormal
eversion of vulva protein5, isoform b protein.
Length = 467
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 690 LNDQANTH-WKFAEVPNLTXESNLTINEIEDFDCSKSESKVLHEESRFI 547
+ND N++ K AE N+ + N N +E DC S + HE +R I
Sbjct: 195 VNDFKNSNDKKMAECNNIRNKLNSLKNYLETHDCKLSREERTHEINRLI 243
>Z81516-1|CAB04203.1| 521|Caenorhabditis elegans Hypothetical
protein F26H9.2 protein.
Length = 521
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 612 EIEDFDCSKSESKVLHEESR-FIKFIESNAFIPFID 508
E+ DF ++ + +HEESR F +F+E+ F+ F+D
Sbjct: 485 ELNDFKATEMD---VHEESRVFTRFVENFIFLNFLD 517
>Z81146-4|CAB03525.1| 501|Caenorhabditis elegans Hypothetical
protein K10D11.6 protein.
Length = 501
Score = 28.3 bits (60), Expect = 6.9
Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 4/190 (2%)
Frame = -3
Query: 660 FAEVPNLTXESNLTINEIEDFDCSKSESKVLHEESRFIKFIESNAFIPFIDSDNSKNSTF 481
F + ++ +S LTI DC+ V+ E + F+ I + N N+ F
Sbjct: 78 FTMMADINDDSMLTIT-----DCNGKSEIVMTSEFQPYVFVGGQFSISLLVGTNGNNTRF 132
Query: 480 DYIVRPIDVHVQPQVIFDANITRKAI--GDKLTKKSTKHKRIITFKNIHFKYKTPKYTME 307
+ V+ D + T A+ + L + S + F P +T
Sbjct: 133 AFQVQWSDFPTPNPAFYTVTKTGPALFFDEMLFENSVTITAETRATIVAFPSTYPDFTPL 192
Query: 306 KRFSTHYKNRYRKSKLDANYVINFDTNLSQLVSKPRKLKKVLAQENLLLKTSFCSNEF-- 133
R + + S +N +VSK R++ QEN L+ ++F ++
Sbjct: 193 LRITLVFDGPDLNSPYLGTLFQALRSN-KPMVSKSRQMTIFTFQENYLVGSNFVVQDYYN 251
Query: 132 IMNANENRSI 103
+ N +E+R I
Sbjct: 252 VQNLSESRGI 261
>Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical
protein F46C5.7 protein.
Length = 199
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 320 FGVLYLKCIFLNVIILLCFVLFFV 391
F +L L C F +I CFV+FF+
Sbjct: 39 FSILILFCAFAELIFYDCFVIFFL 62
>U40948-1|AAA81727.1| 730|Caenorhabditis elegans Gliotactin
(drosophila neuroligin-like) homolog protein 1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 522 IPFIDSDNSKNSTFDYIVRPIDVHVQPQVIFDAN 421
I F D+D + + TF I+R H P FD +
Sbjct: 556 INFTDTDRNASRTFSNIIRRFSYHQNPNFQFDGS 589
>Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 423 NITRKAIGDKLTKKSTKHKRIITFKNIHFKYKTP---KYTMEKRFSTHYKNRYRKSKLDA 253
+++RK + +++ K + +I K K K EKR S +YK + K K D
Sbjct: 98 SVSRKCLQERIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNKFKKDE 157
Query: 252 N 250
N
Sbjct: 158 N 158
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = -3
Query: 312 MEKRFSTHYKNRYRKSKLDANYVINFDTNLSQLVSKPRKLKKVLAQENLLLKTSF 148
ME+ F++ +R KSKL N +N +LSQL S RKL+ ++++ LL+ F
Sbjct: 609 MEQIFNS--PDRINKSKL--NKAMNLAASLSQLRSNYRKLQDMISECVDLLEKPF 659
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = -3
Query: 312 MEKRFSTHYKNRYRKSKLDANYVINFDTNLSQLVSKPRKLKKVLAQENLLLKTSF 148
ME+ F++ +R KSKL N +N +LSQL S RKL+ ++++ LL+ F
Sbjct: 609 MEQIFNS--PDRINKSKL--NKAMNLAASLSQLRSNYRKLQDMISECVDLLEKPF 659
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = -3
Query: 312 MEKRFSTHYKNRYRKSKLDANYVINFDTNLSQLVSKPRKLKKVLAQENLLLKTSF 148
ME+ F++ +R KSKL N +N +LSQL S RKL+ ++++ LL+ F
Sbjct: 609 MEQIFNS--PDRINKSKL--NKAMNLAASLSQLRSNYRKLQDMISECVDLLEKPF 659
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 27.9 bits (59), Expect = 9.1
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = -3
Query: 312 MEKRFSTHYKNRYRKSKLDANYVINFDTNLSQLVSKPRKLKKVLAQENLLLKTSF 148
ME+ F++ +R KSKL N +N +LSQL S RKL+ ++++ LL+ F
Sbjct: 609 MEQIFNS--PDRINKSKL--NKAMNLAASLSQLRSNYRKLQDMISECVDLLEKPF 659
>AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -3
Query: 423 NITRKAIGDKLTKKSTKHKRIITFKNIHFKYKTP---KYTMEKRFSTHYKNRYRKSKLDA 253
+++RK + +++ K + +I K K K EKR S +YK + K K D
Sbjct: 98 SVSRKCLQERIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNKFKKDE 157
Query: 252 N 250
N
Sbjct: 158 N 158
>AC084159-8|AAK39361.2| 655|Caenorhabditis elegans Hypothetical
protein Y73B3A.3 protein.
Length = 655
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 302 RFSMVYFGVLYLKCIFLNVIILLCFVLFFVNLSPMA---FRVIFASK 433
R M GV F +++ LLCF++FF + S ++ +V+ ASK
Sbjct: 455 REKMRIIGVCTQYTAFYDILYLLCFLVFFTDFSRLSRYENQVLLASK 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,153,419
Number of Sequences: 27780
Number of extensions: 355456
Number of successful extensions: 1110
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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