Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10j08
         (870 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071750-1|AAL49372.1|  422|Drosophila melanogaster RH58587p pro...    50   3e-06
AE013599-1585|AAF58456.1|  422|Drosophila melanogaster CG12374-P...    50   3e-06
BT015981-1|AAV36866.1|  426|Drosophila melanogaster RE64060p pro...    47   4e-05
AY069134-1|AAL39279.1|  351|Drosophila melanogaster GH14272p pro...    47   4e-05
AE014134-1310|AAF52537.1|  422|Drosophila melanogaster CG18585-P...    47   4e-05
BT001849-1|AAN71610.1|  428|Drosophila melanogaster RH57626p pro...    44   4e-04
AY118431-1|AAM48460.1|  424|Drosophila melanogaster RH39904p pro...    44   4e-04
AE014134-1691|AAF52809.1|  424|Drosophila melanogaster CG4017-PA...    44   4e-04
AY070608-1|AAL48079.1|  430|Drosophila melanogaster RE71127p pro...    40   0.003
AE014134-1692|AAF52810.1|  430|Drosophila melanogaster CG17633-P...    40   0.003
BT003291-1|AAO25051.1|  453|Drosophila melanogaster GM01959p pro...    40   0.006
AE013599-551|AAG22303.1|  453|Drosophila melanogaster CG2915-PB,...    40   0.006
AE013599-550|AAF59162.2|  453|Drosophila melanogaster CG2915-PA,...    40   0.006
AY071562-1|AAL49184.1|  416|Drosophila melanogaster RE62864p pro...    39   0.008
AE014296-1161|AAF50637.2|  416|Drosophila melanogaster CG14820-P...    39   0.008
AY113471-1|AAM29476.1|  445|Drosophila melanogaster RE43153p pro...    36   0.055
AE014298-794|AAF46080.2|  445|Drosophila melanogaster CG3097-PA ...    36   0.055
BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p pro...    35   0.13 
AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA ...    35   0.13 
AY118570-1|AAM49939.1|  467|Drosophila melanogaster LD41739p pro...    32   0.89 
AE014297-3320|AAF56130.2|  479|Drosophila melanogaster CG4408-PA...    32   0.89 
BT024320-1|ABC86382.1|  394|Drosophila melanogaster IP11170p pro...    32   1.2  
BT003639-1|AAO39643.1|  916|Drosophila melanogaster AT16639p pro...    30   3.6  
AE014298-1320|AAF46481.2|  916|Drosophila melanogaster CG32703-P...    30   3.6  
BT022434-1|AAY54850.1|  107|Drosophila melanogaster IP05703p pro...    30   4.8  
AE014297-2404|AAF55461.1|  121|Drosophila melanogaster CG14321-P...    30   4.8  

>AY071750-1|AAL49372.1|  422|Drosophila melanogaster RH58587p
           protein.
          Length = 422

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKS 621
           GA   + Y   G + DW+Y + KIP++  +ELR K  + F LP +QI E   E+ + +K+
Sbjct: 351 GASGLLNYVVSGAAKDWAYGVKKIPFTCTVELRDKGTFGFFLPSNQITEVGLEVTAGLKA 410

Query: 620 LM 615
           L+
Sbjct: 411 LV 412


>AE013599-1585|AAF58456.1|  422|Drosophila melanogaster CG12374-PA
           protein.
          Length = 422

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKS 621
           GA   + Y   G + DW+Y + KIP++  +ELR K  + F LP +QI E   E+ + +K+
Sbjct: 351 GASGLLNYVVSGAAKDWAYGVKKIPFTCTVELRDKGTFGFFLPSNQITEVGLEVTAGLKA 410

Query: 620 LM 615
           L+
Sbjct: 411 LV 412


>BT015981-1|AAV36866.1|  426|Drosophila melanogaster RE64060p
           protein.
          Length = 426

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKS 621
           G+  D+ Y A GTS DW +        Y IE R K +Y F LP  QI+  C+E++  + +
Sbjct: 356 GSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGFILPPVQIIPNCEELMVGMLA 415

Query: 620 LME 612
           L+E
Sbjct: 416 LIE 418


>AY069134-1|AAL39279.1|  351|Drosophila melanogaster GH14272p
           protein.
          Length = 351

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKS 621
           G+  D+ Y A GTS DW +        Y IE R K +Y F LP  QI+  C+E++  + +
Sbjct: 281 GSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGFILPPVQIIPNCEELMVGMLA 340

Query: 620 LME 612
           L+E
Sbjct: 341 LIE 343


>AE014134-1310|AAF52537.1|  422|Drosophila melanogaster CG18585-PA
           protein.
          Length = 422

 Score = 46.8 bits (106), Expect = 4e-05
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKS 621
           G+  D+ Y A GTS DW +        Y IE R K +Y F LP  QI+  C+E++  + +
Sbjct: 352 GSTADVLYVATGTSVDWVFNELGKKIGYTIEYRDKGRYGFILPPVQIIPNCEELMVGMLA 411

Query: 620 LME 612
           L+E
Sbjct: 412 LIE 414


>BT001849-1|AAN71610.1|  428|Drosophila melanogaster RH57626p
           protein.
          Length = 428

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = -2

Query: 785 DMTYYACGTSTDWSYAIAKIPYSYMIELRSKKYR----FKLPKDQIMETCKEILSAVKSL 618
           D  Y A G+S DW+Y +  + YS+  ELR   Y     F+LP  QI+ T +E   ++  +
Sbjct: 356 DAIYPAAGSSMDWAYGVLNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTGQETTDSLVEM 415

Query: 617 ME 612
           ++
Sbjct: 416 IK 417


>AY118431-1|AAM48460.1|  424|Drosophila melanogaster RH39904p
           protein.
          Length = 424

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = -2

Query: 785 DMTYYACGTSTDWSYAIAKIPYSYMIELRSKKYR----FKLPKDQIMETCKEILSAVKSL 618
           D  Y A G+S DW+Y +  + YS+  ELR   Y     F+LP  QI+ T +E   ++  +
Sbjct: 352 DAIYPAAGSSMDWAYGVLNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTGQETTDSLVEM 411

Query: 617 ME 612
           ++
Sbjct: 412 IK 413


>AE014134-1691|AAF52809.1|  424|Drosophila melanogaster CG4017-PA
           protein.
          Length = 424

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = -2

Query: 785 DMTYYACGTSTDWSYAIAKIPYSYMIELRSKKYR----FKLPKDQIMETCKEILSAVKSL 618
           D  Y A G+S DW+Y +  + YS+  ELR   Y     F+LP  QI+ T +E   ++  +
Sbjct: 352 DAIYPAAGSSMDWAYGVLNVKYSFTYELRPSGYSFWTGFRLPAAQIIPTGQETTDSLVEM 411

Query: 617 ME 612
           ++
Sbjct: 412 IK 413


>AY070608-1|AAL48079.1|  430|Drosophila melanogaster RE71127p
           protein.
          Length = 430

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = -2

Query: 785 DMTYYACGTSTDWSYAIAKIPYSYMIELR--SKKY--RFKLPKDQIMETCKEILSAVKSL 618
           D  Y A G S DW+Y    +  ++  ELR  S  Y   FKLP +QI+   +E+L ++ ++
Sbjct: 360 DAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYLTGFKLPAEQIVPASEELLDSIVAM 419


>AE014134-1692|AAF52810.1|  430|Drosophila melanogaster CG17633-PA
           protein.
          Length = 430

 Score = 40.3 bits (90), Expect = 0.003
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = -2

Query: 785 DMTYYACGTSTDWSYAIAKIPYSYMIELR--SKKY--RFKLPKDQIMETCKEILSAVKSL 618
           D  Y A G S DW+Y    +  ++  ELR  S  Y   FKLP +QI+   +E+L ++ ++
Sbjct: 360 DAIYPAAGASVDWAYGTQDVRMAFCYELRPSSTSYLTGFKLPAEQIVPASEELLDSIVAM 419


>BT003291-1|AAO25051.1|  453|Drosophila melanogaster GM01959p
           protein.
          Length = 453

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRFKLPKDQIMETCKEILSAV 627
           G+  +  Y + G S DW+++ A IP +Y  ELR     +  F LP  +I  T  E  +A+
Sbjct: 380 GSLFETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDLFILPAVEIQPTASEAFTAI 439

Query: 626 KSLME 612
           ++++E
Sbjct: 440 RAIVE 444


>AE013599-551|AAG22303.1|  453|Drosophila melanogaster CG2915-PB,
           isoform B protein.
          Length = 453

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRFKLPKDQIMETCKEILSAV 627
           G+  +  Y + G S DW+++ A IP +Y  ELR     +  F LP  +I  T  E  +A+
Sbjct: 380 GSLFETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDLFILPAVEIQPTASEAFTAI 439

Query: 626 KSLME 612
           ++++E
Sbjct: 440 RAIVE 444


>AE013599-550|AAF59162.2|  453|Drosophila melanogaster CG2915-PA,
           isoform A protein.
          Length = 453

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRFKLPKDQIMETCKEILSAV 627
           G+  +  Y + G S DW+++ A IP +Y  ELR     +  F LP  +I  T  E  +A+
Sbjct: 380 GSLFETIYPSSGGSMDWAHSEAGIPIAYTFELRGPPDSQDLFILPAVEIQPTASEAFTAI 439

Query: 626 KSLME 612
           ++++E
Sbjct: 440 RAIVE 444


>AY071562-1|AAL49184.1|  416|Drosophila melanogaster RE62864p
           protein.
          Length = 416

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 639
           G+     Y   G+  +W+YA+  I   Y IELR K +  F LP + I+   +E+
Sbjct: 346 GSSATTLYEVSGSGKEWAYAVKNIKIHYTIELRDKGELGFVLPPEDIIPVAREV 399


>AE014296-1161|AAF50637.2|  416|Drosophila melanogaster CG14820-PA
           protein.
          Length = 416

 Score = 39.1 bits (87), Expect = 0.008
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -2

Query: 797 GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEI 639
           G+     Y   G+  +W+YA+  I   Y IELR K +  F LP + I+   +E+
Sbjct: 346 GSSATTLYEVSGSGKEWAYAVKNIKIHYTIELRDKGELGFVLPPEDIIPVAREV 399


>AY113471-1|AAM29476.1|  445|Drosophila melanogaster RE43153p
           protein.
          Length = 445

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 770 ACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKSLMEFI 606
           A G S DWS A   + Y Y IELR +  Y F LP   I +T  E  + V+++ + I
Sbjct: 384 AGGGSDDWSRAALGVKYVYTIELRDRGAYGFVLPPRFIKDTALEGWTVVETVAQAI 439


>AE014298-794|AAF46080.2|  445|Drosophila melanogaster CG3097-PA
           protein.
          Length = 445

 Score = 36.3 bits (80), Expect = 0.055
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 770 ACGTSTDWSYAIAKIPYSYMIELRSK-KYRFKLPKDQIMETCKEILSAVKSLMEFI 606
           A G S DWS A   + Y Y IELR +  Y F LP   I +T  E  + V+++ + I
Sbjct: 384 AGGGSDDWSRAALGVKYVYTIELRDRGAYGFVLPPRFIKDTALEGWTVVETVAQAI 439


>BT016051-1|AAV36936.1| 1132|Drosophila melanogaster LP17541p protein.
          Length = 1132

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -2

Query: 797  GAQRDMTYYACGTSTDWSYAIAKIPYSYMIEL-RSKKYRFKLPKDQIMETCKEILSAVKS 621
            G+     Y A G S DW+  IA I Y+Y IE+  + +Y F LP   I    K+ ++   +
Sbjct: 1048 GSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYGFVLPARFIQYNGKDGVTFADT 1107

Query: 620  LMEFIDRN*QSLVSYVSRSSR 558
            +   I +     V+  S  SR
Sbjct: 1108 VARAIAQGRGKSVARNSSGSR 1128


>AE014298-797|AAF46083.2| 1132|Drosophila melanogaster CG3108-PA
            protein.
          Length = 1132

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -2

Query: 797  GAQRDMTYYACGTSTDWSYAIAKIPYSYMIEL-RSKKYRFKLPKDQIMETCKEILSAVKS 621
            G+     Y A G S DW+  IA I Y+Y IE+  + +Y F LP   I    K+ ++   +
Sbjct: 1048 GSSATTLYPAAGGSDDWAKGIAGIKYAYTIEMGDTGRYGFVLPARFIQYNGKDGVTFADT 1107

Query: 620  LMEFIDRN*QSLVSYVSRSSR 558
            +   I +     V+  S  SR
Sbjct: 1108 VARAIAQGRGKSVARNSSGSR 1128


>AY118570-1|AAM49939.1|  467|Drosophila melanogaster LD41739p
           protein.
          Length = 467

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
 Frame = -2

Query: 851 GYISXTQYXKAAVXLTK*GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRF 681
           G ++  +    +  + K G+  +  Y + G S DW++   KIP ++  ELR     +  F
Sbjct: 376 GKLAANKIKDVSGRIYKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELRGPADSEDLF 435

Query: 680 KLPKDQIMETCKEILSAVKSLME 612
            L   +I  T  E  ++++++++
Sbjct: 436 ILSAKEIEPTAAEAFASIQTIVQ 458


>AE014297-3320|AAF56130.2|  479|Drosophila melanogaster CG4408-PA
           protein.
          Length = 479

 Score = 32.3 bits (70), Expect = 0.89
 Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
 Frame = -2

Query: 851 GYISXTQYXKAAVXLTK*GAQRDMTYYACGTSTDWSYAIAKIPYSYMIELR---SKKYRF 681
           G ++  +    +  + K G+  +  Y + G S DW++   KIP ++  ELR     +  F
Sbjct: 388 GKLAANKIKDVSGRIYKSGSIYETIYPSSGGSKDWAHGQLKIPITFSYELRGPADSEDLF 447

Query: 680 KLPKDQIMETCKEILSAVKSLME 612
            L   +I  T  E  ++++++++
Sbjct: 448 ILSAKEIEPTAAEAFASIQTIVQ 470


>BT024320-1|ABC86382.1|  394|Drosophila melanogaster IP11170p
           protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 106 FLYRKKRMGRLVRWSLYCTCNSHSQKSGLTLIGMRKLNAWTQ 231
           F Y ++ +  + R  + CTC+++ Q+  L LIG+  +NA  Q
Sbjct: 342 FFYHQRHLNEMARSFIDCTCDNNGQRL-LNLIGLPSVNAILQ 382


>BT003639-1|AAO39643.1|  916|Drosophila melanogaster AT16639p
           protein.
          Length = 916

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 300 RPFDFRVAMNNMVF*LNFRYIFSVSHNLIRAGY*TRKIFTRIFLWLLVN 446
           R  D   A NN+ F L F ++ S  HN+I+ G   + +  R  ++ L+N
Sbjct: 87  RLVDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLIN 135


>AE014298-1320|AAF46481.2|  916|Drosophila melanogaster CG32703-PA
           protein.
          Length = 916

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 300 RPFDFRVAMNNMVF*LNFRYIFSVSHNLIRAGY*TRKIFTRIFLWLLVN 446
           R  D   A NN+ F L F ++ S  HN+I+ G   + +  R  ++ L+N
Sbjct: 87  RLVDIFKASNNLDFYLVFEFMESDLHNVIKRGNVLKDVHKRFVMYQLIN 135


>BT022434-1|AAY54850.1|  107|Drosophila melanogaster IP05703p
           protein.
          Length = 107

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 103 KFLYRKKRMGRLVRWSLYCTCNSHSQKSGLTLIGMRKLNAWTQ 231
           ++ Y++     +    L  TC+ H+Q  GL+ +G+ K+N   Q
Sbjct: 46  EYAYKETSKNEITYHELEVTCDQHAQCIGLSPVGVAKINCIRQ 88


>AE014297-2404|AAF55461.1|  121|Drosophila melanogaster CG14321-PA
           protein.
          Length = 121

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +1

Query: 103 KFLYRKKRMGRLVRWSLYCTCNSHSQKSGLTLIGMRKLNAWTQ 231
           ++ Y++     +    L  TC+ H+Q  GL+ +G+ K+N   Q
Sbjct: 43  EYAYKETSKNEITYHELEVTCDQHAQCIGLSPVGVAKINCIRQ 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,879,815
Number of Sequences: 53049
Number of extensions: 711111
Number of successful extensions: 1661
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)