Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10j07
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p pro...    33   0.63 
BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p pro...    33   0.63 
AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA...    33   0.63 

>BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p
           protein.
          Length = 265

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 574 FMHFCYVHQRLY*LKKKMYFIMSSKYVIITFLKIAYRILFLYIS----KYVEYTKIKMFI 741
           ++ + Y   +L  L + ++FI   KY  I+FL + + +  +YI      Y  Y     F+
Sbjct: 107 WLSYSYFFNKLMDLLETVFFIFRKKYRQISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFL 166

Query: 742 IKCTHIISHFLYQYH 786
           I    ++   +Y Y+
Sbjct: 167 ITFNVVVHTMMYTYY 181


>BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p
           protein.
          Length = 265

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 574 FMHFCYVHQRLY*LKKKMYFIMSSKYVIITFLKIAYRILFLYIS----KYVEYTKIKMFI 741
           ++ + Y   +L  L + ++FI   KY  I+FL + + +  +YI      Y  Y     F+
Sbjct: 107 WLSYSYFFNKLMDLLETVFFIFRKKYRQISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFL 166

Query: 742 IKCTHIISHFLYQYH 786
           I    ++   +Y Y+
Sbjct: 167 ITFNVVVHTMMYTYY 181


>AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA
           protein.
          Length = 265

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +1

Query: 574 FMHFCYVHQRLY*LKKKMYFIMSSKYVIITFLKIAYRILFLYIS----KYVEYTKIKMFI 741
           ++ + Y   +L  L + ++FI   KY  I+FL + + +  +YI      Y  Y     F+
Sbjct: 107 WLSYSYFFNKLMDLLETVFFIFRKKYRQISFLHVFHHVYMVYIGFLYMYYYGYGGHGFFL 166

Query: 742 IKCTHIISHFLYQYH 786
           I    ++   +Y Y+
Sbjct: 167 ITFNVVVHTMMYTYY 181


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,996,792
Number of Sequences: 53049
Number of extensions: 596328
Number of successful extensions: 1244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)