Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte10j06
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    25   2.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.1  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 542 VKNLS*KVLEELSEHKTRATISEYL--LIRTFIESDIQNVCKLIYFFHDTFL 393
           +KN+  K+   +    T   +   +  L+   I  DI+  C+++Y  HD ++
Sbjct: 164 IKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYI 215


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 234 APVEKYRVPQYYAILSRHYLNSDLVQ 157
           A VE+ ++P +   LSR+YL+  ++Q
Sbjct: 621 AAVERMKIPPHLCRLSRNYLDGRVLQ 646


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,535
Number of Sequences: 2352
Number of extensions: 15117
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)