Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10j02
(404 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L47738-1|AAA79022.1| 236|Homo sapiens protein ( Homo sapiens in... 34 0.16
X62009-1|CAB56757.1| 754|Homo sapiens fibrillin 5 protein. 32 0.84
U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein. 32 0.84
AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital... 32 0.84
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 31 1.9
X62008-1|CAB56534.1| 517|Homo sapiens fibrillin 15 protein. 31 1.9
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 31 1.9
BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein. 31 1.9
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 31 1.9
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 31 1.9
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 31 1.9
AL117551-1|CAB55988.1| 511|Homo sapiens hypothetical protein pr... 31 1.9
AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein. 31 1.9
AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming gro... 31 1.9
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 31 1.9
AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein. 31 1.9
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 31 1.9
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 31 1.9
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 31 1.9
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 31 1.9
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 31 1.9
U33837-1|AAB41649.1| 4655|Homo sapiens gp330 precursor protein. 29 5.9
AY265358-1|AAP88586.1| 4655|Homo sapiens glycoprotein receptor g... 29 5.9
AY265357-1|AAP88585.1| 4655|Homo sapiens glycoprotein receptor g... 29 5.9
AC008178-1|AAY24266.1| 773|Homo sapiens unknown protein. 29 5.9
>L47738-1|AAA79022.1| 236|Homo sapiens protein ( Homo sapiens
inducible protein mRNA, complete cds. ).
Length = 236
Score = 34.3 bits (75), Expect = 0.16
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3
Query: 390 LRVTRTTSQWICRRIVLSTFDASVSHKM*CEH 295
L + R T + +C+ + L +FDA +H++ C+H
Sbjct: 86 LEINRVTHRLLCKHMTLDSFDAMFTHRLLCKH 117
>X62009-1|CAB56757.1| 754|Homo sapiens fibrillin 5 protein.
Length = 754
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C CN LD E C D+D C++
Sbjct: 340 TIGSFKCRCNSGFALDMEERNCTDIDECRI 369
>U03272-1|AAA18950.1| 2911|Homo sapiens fibrillin-2 protein.
Length = 2911
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C CN LD E C D+D C++
Sbjct: 1091 TIGSFKCRCNSGFALDMEERNCTDIDECRI 1120
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQLK 153
T G +C C VL E+ C DLD CQ K
Sbjct: 2508 TEGSYQCSCPRGYVLQEDGKTCKDLDECQTK 2538
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDAC 162
T G +C+C L E+T +C D+D C
Sbjct: 1668 TFGSFQCECPQGYYLSEDTRICEDIDEC 1695
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -1
Query: 320 YHTRCDANTI--SQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 150
+ TR D N S C N Q T G RC+C LD CVD D C + N
Sbjct: 2165 HDTREDVNECLESPGICSNGQCIN---TDGSFRCECPMGYNLDYTGVRCVDTDECSIGN 2220
>AB209735-1|BAD92972.1| 1976|Homo sapiens fibrillin 2 (congenital
contractural arachnodactyly) variant protein.
Length = 1976
Score = 31.9 bits (69), Expect = 0.84
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C CN LD E C D+D C++
Sbjct: 156 TIGSFKCRCNSGFALDMEERNCTDIDECRI 185
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQLK 153
T G +C C VL E+ C DLD CQ K
Sbjct: 1573 TEGSYQCSCPRGYVLQEDGKTCKDLDECQTK 1603
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDAC 162
T G +C+C L E+T +C D+D C
Sbjct: 733 TFGSFQCECPQGYYLSEDTRICEDIDEC 760
Score = 28.7 bits (61), Expect = 7.8
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = -1
Query: 320 YHTRCDANTI--SQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 150
+ TR D N S C N Q T G RC+C LD CVD D C + N
Sbjct: 1230 HDTREDVNECLESPGICSNGQCIN---TDGSFRCECPMGYNLDYTGVRCVDTDECSIGN 1285
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C C+ LD E C D+D C++
Sbjct: 1178 TIGSFKCRCDSGFALDSEERNCTDIDECRI 1207
Score = 29.9 bits (64), Expect = 3.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -1
Query: 341 CPRLMHPYHTRCDAN---TISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDL 171
CP +HT C N T C + I + T G C+C LD+ C D+
Sbjct: 2642 CPPGFTQHHTSCIDNNECTSDINLCGSKGICQN--TPGSFTCECQRGFSLDQTGSSCEDV 2699
Query: 170 DACQ 159
D C+
Sbjct: 2700 DECE 2703
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKNV 147
G RC+C+ V + C D+D C L N+
Sbjct: 1556 GGYRCECDMGFVPSADGKACEDIDECSLPNI 1586
>X62008-1|CAB56534.1| 517|Homo sapiens fibrillin 15 protein.
Length = 517
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C C+ LD E C D+D C++
Sbjct: 251 TIGSFKCRCDSGFALDSEERNCTDIDECRI 280
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C C+ LD E C D+D C++
Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCTDIDECRI 1076
Score = 29.9 bits (64), Expect = 3.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -1
Query: 341 CPRLMHPYHTRCDAN---TISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDL 171
CP +HT C N T C + I + T G C+C LD+ C D+
Sbjct: 2511 CPPGFTQHHTSCIDNNECTSDINLCGSKGICQN--TPGSFTCECQRGFSLDQTGSSCEDV 2568
Query: 170 DACQ 159
D C+
Sbjct: 2569 DECE 2572
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKNV 147
G RC+C+ V + C D+D C L N+
Sbjct: 1425 GGYRCECDMGFVPSADGKACEDIDECSLPNI 1455
>BC008761-1|AAH08761.2| 743|Homo sapiens LTBP3 protein protein.
Length = 743
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKN 150
G + C+C G LD CVD+D C+ N
Sbjct: 673 GGAVCECPGGFQLDASRARCVDIDECRELN 702
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AL117551-1|CAB55988.1| 511|Homo sapiens hypothetical protein
protein.
Length = 511
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKN 150
G + C+C G LD CVD+D C+ N
Sbjct: 441 GGAVCECPGGFQLDASRARCVDIDECRELN 470
>AK024477-1|BAB15767.1| 1382|Homo sapiens FLJ00070 protein protein.
Length = 1382
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKN 150
G + C+C G LD CVD+D C+ N
Sbjct: 1312 GGAVCECPGGFQLDASRARCVDIDECRELN 1341
>AF135960-1|AAF62352.3| 1256|Homo sapiens latent transforming growth
factor beta binding protein 3 protein.
Length = 1256
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKN 150
G + C+C G LD CVD+D C+ N
Sbjct: 1186 GGAVCECPGGFQLDASRARCVDIDECRELN 1215
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C C+ LD E C D+D C++
Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCTDIDECRI 1076
Score = 29.9 bits (64), Expect = 3.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = -1
Query: 341 CPRLMHPYHTRCDAN---TISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDL 171
CP +HT C N T C + I + T G C+C LD+ C D+
Sbjct: 2511 CPPGFTQHHTSCIDNNECTSDINLCGSKGICQN--TPGSFTCECQRGFSLDQTGSSCEDV 2568
Query: 170 DACQ 159
D C+
Sbjct: 2569 DECE 2572
Score = 29.1 bits (62), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDACQLKNV 147
G RC+C+ V + C D+D C L N+
Sbjct: 1425 GGYRCECDMGFVPSADGKACEDIDECSLPNI 1455
>AB177802-1|BAD16738.1| 1365|Homo sapiens fibrillin 1 protein.
Length = 1365
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G +C C+ LD E C D+D C++
Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCTDIDECRI 1076
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1424 GMFRCICNGGYELDRGGGNCTDINEC 1449
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 888 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 920
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1005 TVGSFHCACAGGFALDAQERNCTDIDECRI 1034
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1202 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1244
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 30.7 bits (66), Expect = 1.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 239 GWSRCDCNGDLVLDEETGLCVDLDAC 162
G RC CNG LD G C D++ C
Sbjct: 1431 GMFRCICNGGYELDRGGGNCTDINEC 1456
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVD--LDACQLK 153
T G RC+C L+LD LCVD L+ C L+
Sbjct: 895 TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLR 927
Score = 29.5 bits (63), Expect = 4.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 245 TCGWSRCDCNGDLVLDEETGLCVDLDACQL 156
T G C C G LD + C D+D C++
Sbjct: 1012 TVGSFHCACAGGFALDAQERNCTDIDECRI 1041
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -1
Query: 275 DNPQIYEMGYTC---GWSRCDCNGDLVLDEETGLCVDLDACQL 156
+NP++ + G+ G RC C + + CVD+D C L
Sbjct: 1209 ENPRVCDQGHCTNMPGGHRCLCYDGFMATPDMRTCVDVDECDL 1251
>U33837-1|AAB41649.1| 4655|Homo sapiens gp330 precursor protein.
Length = 4655
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 308 CDANTISQRTCDNPQIYEMGYTCGWSRCDC 219
C T Q TCDN Y C W + DC
Sbjct: 142 CQYPTCEQLTCDNGACYNTSQKCDW-KVDC 170
>AY265358-1|AAP88586.1| 4655|Homo sapiens glycoprotein receptor
gp330/megalin precursor protein.
Length = 4655
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 308 CDANTISQRTCDNPQIYEMGYTCGWSRCDC 219
C T Q TCDN Y C W + DC
Sbjct: 142 CQYPTCEQLTCDNGACYNTSQKCDW-KVDC 170
>AY265357-1|AAP88585.1| 4655|Homo sapiens glycoprotein receptor
gp330/megalin precursor protein.
Length = 4655
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 308 CDANTISQRTCDNPQIYEMGYTCGWSRCDC 219
C T Q TCDN Y C W + DC
Sbjct: 142 CQYPTCEQLTCDNGACYNTSQKCDW-KVDC 170
>AC008178-1|AAY24266.1| 773|Homo sapiens unknown protein.
Length = 773
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 308 CDANTISQRTCDNPQIYEMGYTCGWSRCDC 219
C T Q TCDN Y C W + DC
Sbjct: 142 CQYPTCEQLTCDNGACYNTSQKCDW-KVDC 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,794,352
Number of Sequences: 237096
Number of extensions: 1002716
Number of successful extensions: 2550
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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