Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10i18
(773 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021294-1|AAX33442.1| 620|Drosophila melanogaster RE26627p pro... 32 0.76
AE014297-2149|AAN13698.1| 552|Drosophila melanogaster CG32855-P... 32 0.76
AE014297-3100|AAN13903.1| 551|Drosophila melanogaster CG31424-P... 30 3.1
AY118901-1|AAM50761.1| 509|Drosophila melanogaster LD10524p pro... 29 5.4
AE013599-3044|AAF57445.1| 726|Drosophila melanogaster CG11180-P... 29 5.4
AY051693-1|AAK93117.1| 216|Drosophila melanogaster LD23959p pro... 29 7.1
AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-P... 29 7.1
AE014297-1007|AAO41528.1| 244|Drosophila melanogaster CG33105-P... 29 7.1
AE014297-1001|AAG22137.2| 216|Drosophila melanogaster CG33104-P... 29 7.1
>BT021294-1|AAX33442.1| 620|Drosophila melanogaster RE26627p
protein.
Length = 620
Score = 32.3 bits (70), Expect = 0.76
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = -2
Query: 691 IPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQY 512
+P R ++E+ + ARP ARR S K + P+ + L ++ +
Sbjct: 359 MPKRANSSLEKRHITARPAARRANSTL--KPGGIKPKSPNANSDELLVKCLAKGQEILRQ 416
Query: 511 FQALSESSKRWSGPGGTVNRKELIDKQKELQQ 416
+++S KR + G T +L+ +K+LQ+
Sbjct: 417 VESMSAKPKRSTSRGVTKEHSQLVKNKKKLQK 448
>AE014297-2149|AAN13698.1| 552|Drosophila melanogaster CG32855-PA
protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.76
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = -2
Query: 691 IPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEEDYFLSPEQTEQY 512
+P R ++E+ + ARP ARR S K + P+ + L ++ +
Sbjct: 291 MPKRANSSLEKRHITARPAARRANSTL--KPGGIKPKSPNANSDELLVKCLAKGQEILRQ 348
Query: 511 FQALSESSKRWSGPGGTVNRKELIDKQKELQQ 416
+++S KR + G T +L+ +K+LQ+
Sbjct: 349 VESMSAKPKRSTSRGVTKEHSQLVKNKKKLQK 380
>AE014297-3100|AAN13903.1| 551|Drosophila melanogaster CG31424-PA
protein.
Length = 551
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 494 FTQRLKILFSLLGTKKIIFF*SAFNLVSSFGR 589
FT+R K+LFSL G F +F ++ S+ R
Sbjct: 396 FTERAKLLFSLKGNHAFTLFSESFAIIESYQR 427
>AY118901-1|AAM50761.1| 509|Drosophila melanogaster LD10524p
protein.
Length = 509
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -2
Query: 724 KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEE 548
KK D E +++ PP E+V + + + RS DE+ + ER D+ +A+EE
Sbjct: 46 KKKDKERADE--PPTKEEEPEQVASMPKKKKKSKRSSLDEEKLVESEERTDEQPTAVEE 102
>AE013599-3044|AAF57445.1| 726|Drosophila melanogaster CG11180-PA
protein.
Length = 726
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -2
Query: 724 KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEE 548
KK D E +++ PP E+V + + + RS DE+ + ER D+ +A+EE
Sbjct: 263 KKKDKERADE--PPTKEEEPEQVASMPKKKKKSKRSSLDEEKLVESEERTDEQPTAVEE 319
>AY051693-1|AAK93117.1| 216|Drosophila melanogaster LD23959p
protein.
Length = 216
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = -2
Query: 400 VNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFM 221
V+ QV H DY QKE L +LR +L++V +I E R R
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLR--IRQLLDQVEQITKEQNYQRYREERFRHTS 177
Query: 220 VAISDRIAVW 191
+ + R+ W
Sbjct: 178 ESTNSRVLWW 187
>AE014297-2553|AAF55574.3| 1602|Drosophila melanogaster CG14303-PA
protein.
Length = 1602
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 451 KELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKEMLVSN 323
K L+DKQKE + V + V YH+ + I +G + L +N
Sbjct: 1064 KPLMDKQKERSTSYTYKVGQAVVVTYHMDNMIYRGIVQRLENN 1106
>AE014297-1007|AAO41528.1| 244|Drosophila melanogaster CG33105-PA
protein.
Length = 244
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = -2
Query: 400 VNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFM 221
V+ QV H DY QKE L +LR +L++V +I E R R
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLR--IRQLLDQVEQITKEQNYQRYREERFRHTS 177
Query: 220 VAISDRIAVW 191
+ + R+ W
Sbjct: 178 ESTNSRVLWW 187
>AE014297-1001|AAG22137.2| 216|Drosophila melanogaster CG33104-PA
protein.
Length = 216
Score = 29.1 bits (62), Expect = 7.1
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = -2
Query: 400 VNFSAQVAYHLCDYIAKGQKEMLVSNRLRSIADVVLERVAEILGEPKPSRSNPGRLARFM 221
V+ QV H DY QKE L +LR +L++V +I E R R
Sbjct: 120 VHLDIQVGEHAIDYAHVAQKEKLTELQLR--IRQLLDQVEQITKEQNYQRYREERFRHTS 177
Query: 220 VAISDRIAVW 191
+ + R+ W
Sbjct: 178 ESTNSRVLWW 187
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,852,928
Number of Sequences: 53049
Number of extensions: 708260
Number of successful extensions: 2182
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2182
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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