Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10i15
(813 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 34 0.021
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 32 0.084
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 31 0.19
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 31 0.26
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.59
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 29 0.79
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 29 0.79
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 29 0.79
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 29 1.0
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 29 1.0
SPCC132.02 |hst2||Sir2 family histone deacetylase Hst2|Schizosac... 29 1.0
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 28 1.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 2.4
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 3.2
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 27 3.2
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 3.2
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 4.2
SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr ... 27 4.2
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 27 4.2
SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex |... 27 4.2
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 5.5
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 26 5.5
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 5.5
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 26 7.3
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 26 7.3
SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr... 26 7.3
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 7.3
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 26 7.3
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 9.7
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 9.7
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 9.7
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 25 9.7
SPBC25H2.15 |||programmed cell death protein homolog|Schizosacch... 25 9.7
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 34.3 bits (75), Expect = 0.021
Identities = 25/124 (20%), Positives = 55/124 (44%)
Frame = -3
Query: 511 SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTT 332
SS+N E T + ++D+++ K+A++ S E T ++ + N+ + +
Sbjct: 360 SSENIKADQPENSTKQENPEEDMQI--KDAEEHSNLESTPAAQQT--SEVEANNHQEKPS 415
Query: 331 GCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNKSDASEMRNKKLGSLVNE 152
P + I+ +E T + + ++ + NN + INQ+ + + + S NE
Sbjct: 416 SLPAVEQINVNEEN-NTPETEGLEDEKEENNTAAESLINQEETTSGEAVTKSTVESSANE 474
Query: 151 QNFE 140
+ E
Sbjct: 475 EEAE 478
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 32.3 bits (70), Expect = 0.084
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = -3
Query: 547 LSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLS--KNADKQSTKEITTKEEKNR 374
LS EST Q+++S N DK N++ETL +++ + LS ++ +K E+ ++K
Sbjct: 808 LSEESTRLQELQSQLNQDK--NQIETLNERISAAADELSSMESINKNQANELKLAKQKCS 865
Query: 373 KNRESVN 353
+E +N
Sbjct: 866 NLQEKIN 872
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 31.1 bits (67), Expect = 0.19
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = -3
Query: 343 YRTTGCPKIS-LIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNKSDASEMRNKKLG 167
Y TG P I+ L D +E +K A++ +N E+GK +QD+ S S RNK
Sbjct: 110 YEDTGLPVINELSDMLEEGYQEVKPYAVNW-DNVLKEEEEGKDSQDDPSVLSHKRNKSSK 168
Query: 166 SLVNEQNFEL 137
L++ + L
Sbjct: 169 ELIDAMQWPL 178
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 30.7 bits (66), Expect = 0.26
Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 8/181 (4%)
Frame = -3
Query: 652 DRILKTVINNKIDSMIEKVRDKFCQEFG--ECANTRTLSVESTV--EQQIESSKNFDKHL 485
D V ++++ ++EK + FC +FG E + ++T+ E+++ + K +
Sbjct: 347 DTSFMNVNPDELEELLEKKLNSFCDDFGDDERSGFDNTDHDNTLVGEEEMVPGNHGGKSI 406
Query: 484 NELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTTGCPKISLID 305
NE T KQ ++ E KN S E +E + +RE T SL D
Sbjct: 407 NEEITKNKQKQNFNESDLKN--MASRIETFINDEASNNHREDFYGVKNSDTDTDSDSLAD 464
Query: 304 YPDETL--GTLKADAMDLNENPNNAIEDGKINQDNKSDASEMR--NKKLGSLVNEQNFEL 137
DE D ++ +E + GK + D E N+ + + N E
Sbjct: 465 SDDEIFLNRNQGIDEVEFDETKFYDLLKGKDGKYQNQDVDEFSSGNEDEMDIPGDANMEE 524
Query: 136 Y 134
Y
Sbjct: 525 Y 525
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.5 bits (63), Expect = 0.59
Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 8/187 (4%)
Frame = -3
Query: 718 TAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKV--RDKFCQEFGE--CANTR 551
T +E + Q +++ RV T + N+ID + + C+ E N +
Sbjct: 359 TLKENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRRNLLWAESSCETIREENQKNIK 418
Query: 550 TLS-VESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKE---ITTKEE 383
L+ ES + ++S L+ T QLKD+I L + + + ++ +E
Sbjct: 419 KLNDAESLKSRLLQSRTQMQTELDSYITSNSQLKDEITSLKQTVSESEAERKRLFSSAQE 478
Query: 382 KNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNK 203
K + +E+VN + T SL + +E LK DL E K+ ++
Sbjct: 479 KQLQMKETVN----KLT-----SLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLREQT 529
Query: 202 SDASEMR 182
D+ ++R
Sbjct: 530 QDSQKLR 536
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 29.1 bits (62), Expect = 0.79
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Frame = -3
Query: 508 SKNFDKHLNELETLIKQLKDDIEVLSKNAD-KQSTKEITTKEEKNRKNRESVNDEGYRTT 332
+KNF + N+LE K + N + K+ KE E N++ ++ ++ Y
Sbjct: 276 NKNF-RSQNQLENHENSKKHKKNLRKMNQEIKKHAKEAQKNAESNKQPEDAPSESPYSN- 333
Query: 331 GCPKISLIDYPDETLGTLKADA--MDLNENP-NNAIEDGKINQDNKSD 197
K+S D+ + ++ +++++N A EDG +N+D+K D
Sbjct: 334 ---KVSSSDFYTRSFEEIEKTFTFVEISDNEFYTASEDGFLNEDDKLD 378
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 29.1 bits (62), Expect = 0.79
Identities = 19/108 (17%), Positives = 49/108 (45%)
Frame = -3
Query: 733 RPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANT 554
+P R++ ++++NR+ + + AT + I ++ ++ ++ ++R
Sbjct: 402 KPFRKSRKQSKNRKNKSSVATQFSEESEDIADSITSSTFFPVLPQIRPSTPLNL----KL 457
Query: 553 RTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQS 410
R + S+ + +K FD+ L E L+ K +L+ + + +S
Sbjct: 458 RNFIISSSEDSTSPKAKEFDRPLPSTEFLVAINKSQEALLNNSPNSKS 505
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = -3
Query: 538 ESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEK 380
ESTV +Q + N +K L +L + + ++ KN D+Q ++++ E++
Sbjct: 14 ESTVAEQRKGQSNEEKPLIDLNDSLDEQRNAYNEHCKNHDQQPSQQVRNMEDE 66
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.7 bits (61), Expect = 1.0
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = -3
Query: 568 ECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTK 389
E R+ + +E++ K DK + K D+IE K D++ E TT
Sbjct: 257 EARRRRSAQNSAKLEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEVDEEPVSEPTTS 316
Query: 388 EEKNRKNRESVNDEGY 341
KN+E + G+
Sbjct: 317 PILPPKNQEPIRMGGF 332
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 1.0
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = -3
Query: 643 LKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLI 464
LK ++N +++ I+KV D + E + S + + + + + K+ +L I
Sbjct: 10 LKKAMSN-VETSIDKVLDG--NQIEEMSRGNAKSKDEIIAKLLTEGQALSKNELKLNNTI 66
Query: 463 KQLKDDI---EVLSKNAD-KQSTKEITTKEEKNRKNR 365
KQLK + E K D KQ+T E+ + K + +
Sbjct: 67 KQLKKSLSEAETKLKRLDEKQATPELQVSDSKEMEEQ 103
>SPCC132.02 |hst2||Sir2 family histone deacetylase
Hst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -3
Query: 547 LSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVL 434
LSV+ST+E+ K D +N + ++ KD++ +L
Sbjct: 290 LSVDSTIEKNASEQKKDDNSVNPFTKIEEKKKDEVTLL 327
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Frame = -3
Query: 712 EETENRRVQKTKATVLRVTMDRILKTVINNKIDSMI--EKVRDKFC----QEFGECANTR 551
EET+ + + K + LKT++ +K++ ++ K+ C ++G AN
Sbjct: 527 EETDEEKAAREKLEKEYEEFAKQLKTILGDKVEKVVVSNKIVGSPCLLTTGQYGWSANME 586
Query: 550 TLSV-----ESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITT 392
+ ++++ + S K F+ +N +I +LK +E A+ +S K++ T
Sbjct: 587 RIMKAQALRDTSMSAYMSSRKTFE--INPKSPIIAELKKKVE--ENGAEDRSVKDLAT 640
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = -3
Query: 553 RTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDI-----EVLSKNADKQSTKEITTK 389
R + +EQ I + + + +EL +I+ LK I E++S NAD K+
Sbjct: 1141 RIKEISEMLEQSIATEEKLRRKNSELCDIIEALKYQIQDQETEIISLNADNLDLKDTNGV 1200
Query: 388 EEKN 377
EKN
Sbjct: 1201 LEKN 1204
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/77 (15%), Positives = 33/77 (42%)
Frame = -3
Query: 607 IEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSK 428
+++ +D E E + + + E + Q + L+ + L+ + +D+I L +
Sbjct: 261 VQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKR 320
Query: 427 NADKQSTKEITTKEEKN 377
+++ + E+N
Sbjct: 321 QIEEKENSSSAFENEEN 337
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 465 IKVSNSFRCLSKFFEDSICCSTVDSTLNVLVLAHSPNS*QNLSLTFSIIESILLLITVFS 644
+ +S+S S++ SI +TV S+ + + P+S Q +S + S +++++ ++ S
Sbjct: 78 LSISSSSSTSSEYSSSSIPITTVSSSDSFI-----PSSSQTISASSSTTDNVIVSSSISS 132
Query: 645 ILSMVTLSTV 674
+S +ST+
Sbjct: 133 TVSSTPVSTI 142
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.1 bits (57), Expect = 3.2
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 423 AFFDKTSMSSFNCFI-KVSNSFRCLSKFFEDSICCSTVDSTLNVLVLAHSPNS 578
A K + N FI K F CL + +S ST+ + L++A+ NS
Sbjct: 560 ATLTKDDANKSNNFITKARLGFHCLQMIYRESTYYSTIMEAIKNLLIAYDMNS 612
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 26.6 bits (56), Expect = 4.2
Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 5/148 (3%)
Frame = -3
Query: 703 ENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVE---- 536
E RR+ + K+ + + + K + NKI +M ++V G +TL +
Sbjct: 870 EERRILQLKSDLKSIRNNNERKRNLQNKISNMDKEVEAININNEGLVTEIKTLQDKIMEI 929
Query: 535 STVEQQIESSKNFDKHLNELETLIKQLKDDIEVLS-KNADKQSTKEITTKEEKNRKNRES 359
+ +I+ SK +++L +K +KD + +S K + + E N +
Sbjct: 930 GGIRYRIQKSK-----VDDLHEQLKFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYD 984
Query: 358 VNDEGYRTTGCPKISLIDYPDETLGTLK 275
E T SL Y DE L+
Sbjct: 985 TTTESIATLKTELQSLNKYVDEHKSRLR 1012
>SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 188
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = -3
Query: 529 VEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKN 377
++ Q+E+S N K + ELETL +L+ + A+K + T +++K+
Sbjct: 137 LQTQVEASTNNAKAVEELETLRTKLETRDKEYETLAEKYAAVTKTVEKKKD 187
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = -3
Query: 280 LKADAMDLNENPNNAIEDGKINQDNKSDASEMRNKK 173
L+ + ++ N ++GK ++D+K D+++ +N K
Sbjct: 174 LETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDK 209
>SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 445 IEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADA 266
I VL D ST +T + N K ++ +E +RT GC ++ + LG K DA
Sbjct: 344 ILVLCLIVDNYSTDVLTLANDLNVKTMKA--NELFRTVGCRIMAYTETQRMALGLNKTDA 401
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 457 LKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGY 341
++DD+ S ++DK +T ++ + +RK R S G+
Sbjct: 589 VRDDVSSASSDSDKGTTGLGKSESKSSRKERRSSTSSGH 627
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = -3
Query: 544 SVESTVEQQIE--SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQST 407
++E+ ++Q +E ++ +++LET I + + VL +NA ST
Sbjct: 804 AIEAQMKQDMEIARARTIKTRIDQLETSITEFNKKLMVLQRNAKNLST 851
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 430 KNADKQSTKEITTKEEKNRKNRESVNDEGYRTTGCP 323
KNA KQS + + ++ E ND+ RT G P
Sbjct: 419 KNASKQSIQNENKASYSSYEDSEIQNDDETRTVGTP 454
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = -3
Query: 511 SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVND 350
S N HL E + + DIE L +Q+TK + ++ +D
Sbjct: 700 SQSNIPPHLQEHRQSQQHFQQDIEALQSQQQQQATKNSLMEAAYQNAQKQKEDD 753
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 7.3
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 11/127 (8%)
Frame = -3
Query: 544 SVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQS-------TKEITTKE 386
+V+ T+ SK K + + T++ K D+EV N +++ TKE+ +
Sbjct: 24 NVDPTLNLLFSQSKPIPKPVAKETTVLT--KKDVEVEEANGVEEAAETIESDTKEVQNIK 81
Query: 385 EKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKA----DAMDLNENPNNAIEDGKI 218
K++K ++ +ND G L+ DE A D D + + +E+
Sbjct: 82 PKSKKKKKKLNDSSDDIEGKYFEELLAEEDEEKDKDSAGLINDEEDKSPAKQSVLEERTS 141
Query: 217 NQDNKSD 197
+D KS+
Sbjct: 142 QEDVKSE 148
>SPBC1604.08c |imp1||importin alpha|Schizosaccharomyces pombe|chr
2|||Manual
Length = 539
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 526 EQQIESSKNF-DKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVND 350
EQQIE K ++ LN+ L L++DI+V + Q E K+E + + ++D
Sbjct: 30 EQQIEIRKQKREESLNKRRNLNAVLQNDIDVEEEADQSQVQMEQQMKDEFPKLTADVMSD 89
Query: 349 E 347
+
Sbjct: 90 D 90
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 472 TLIKQLKDDIEVLSKNADKQSTKE-ITTKEEKNRKNRESVN 353
+LI L DD+ ++ K++ ++ T+E I T +K R + VN
Sbjct: 758 SLIVALPDDVAMVDKSSLRRPTRESICTPVKKLRSKHDIVN 798
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 7.3
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = -3
Query: 721 RTAEETENRRVQKTKATVLRVTMDRIL-----KTVINNKIDSMIEKVRDKFCQEFGECAN 557
+TA ET+ +R T+ + + D+ L K +NN + + V K G
Sbjct: 441 QTAIETDIQRYSPTEEDLNPIADDKSLLFDLEKLRLNNDEEKLDPDVPQKLAMAQGWYPV 500
Query: 556 TRTLSVESTVEQQIESSKNFDKHLNEL-ETLIKQLKDDIEVLSKNADKQ 413
+ + + ++ +S+ FD+ EL + I+ L D S+N DKQ
Sbjct: 501 VQKSLIILSKIYRLVNSQVFDEIALELVHSCIRSLVDAYRYFSRNNDKQ 549
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 250 NPNNAIEDGKINQDNKSDASEMRNKK 173
+PN ++E +IN D D+ + NKK
Sbjct: 912 SPNTSVELPEINSDYSDDSDDEGNKK 937
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 469 LIKQLKDDI-EVLSKNADKQSTKEITTKEEKNRKNRESVNDE 347
++KQ K++I +V S+ +K +K E+ N ++ SV +
Sbjct: 7 IVKQTKNEIHQVTSRVQEKLDSKSTNAVEQNNNSSQASVTKD 48
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 9.7
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 10/138 (7%)
Frame = -3
Query: 529 VEQQIESSKNFDKHLNEL-ETLIKQLK--DDIEVLSKNADKQSTKEITTKEEKNRKNRES 359
V+Q E + + L + E L K K DD E + ++ +EI E+ R+N ES
Sbjct: 534 VDQLQEYVEEITQELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEES 593
Query: 358 VN---DEGYRTTGCPKISLIDYPDE--TLGTLKADAMDLNENPNNAIEDGKINQDNKSDA 194
++ +E + T Y D+ L+ L E N A ED N +
Sbjct: 594 ISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQ 653
Query: 193 SEMRNKKLGSL--VNEQN 146
+M ++ SL NE+N
Sbjct: 654 LKMTEAEVDSLRKENEEN 671
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 361 SVNDEGYRTTGCPKISLID 305
S+NDEGY T PK ++++
Sbjct: 790 SMNDEGYTTISIPKANVLN 808
>SPBC25H2.15 |||programmed cell death protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +2
Query: 299 WIVNQAYFGTPSRPIA-----FVVNTF-SIFPIFLFFGCNLFSTLFIC 424
W+ QA+ G P PI+ +TF FP+F F GC+L + C
Sbjct: 5 WVQTQAWLGFPDVPISQEDKPDEYSTFLGGFPVF-FDGCSLNPNIIKC 51
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,946,566
Number of Sequences: 5004
Number of extensions: 58256
Number of successful extensions: 293
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 396433620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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