Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10i15
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 39 0.004
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 35 0.089
03_06_0777 + 36181095-36181311,36181444-36181530,36181785-361827... 34 0.12
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 33 0.20
12_01_0811 - 7440413-7440712,7441285-7441398,7441448-7441705,744... 32 0.47
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 32 0.47
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 32 0.62
05_06_0123 + 25817172-25817470,25818983-25819133,25819217-258193... 31 1.1
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 31 1.4
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085... 30 1.9
09_04_0539 - 18416184-18416830,18417983-18419057 30 2.5
04_01_0616 - 8069107-8069217,8070127-8070499,8070514-8070751,807... 30 2.5
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 30 2.5
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 2.5
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 29 3.3
12_02_0668 + 21688853-21688933,21689043-21689081,21689597-216897... 29 4.4
08_01_0205 - 1642769-1642783,1642923-1643555,1643656-1643737,164... 29 4.4
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 29 4.4
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 29 4.4
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 29 5.8
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 29 5.8
12_01_0943 - 9324181-9325095,9326671-9326853 28 7.7
08_01_0077 + 546473-546512,546739-547013,547772-547885,548002-55... 28 7.7
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 28 7.7
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 28 7.7
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Frame = -3
Query: 634 VINNKIDSMIEKVRDK-FCQEFGECANTRTLS-VESTVEQQIESSKNFDKHLNELETLIK 461
V+ NK + + + +++K F + E + T+ L+ + +TV++ E + L E+E L
Sbjct: 2332 VLENKSNDLEKMLQEKEFALKSLEVSRTKALTKLATTVDKFDELHSLSESLLAEVENLQS 2391
Query: 460 QLKD-DIEV-LSKNADKQSTKEITTKEEKNRKNRESVND 350
QL++ D E+ + +ST E+ T EE N+K +ND
Sbjct: 2392 QLQERDSEISFLRQEITRSTNELLTTEESNKKYSSQIND 2430
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 34.7 bits (76), Expect = 0.089
Identities = 39/202 (19%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Frame = -3
Query: 787 STLAWLCAQPFTSTSTKIRPLRRTAEETENRRVQKTK------ATVLRVTMDRILKTVIN 626
S L + CA K+R L+ A +TE +V+K K R+ +++ L++ +
Sbjct: 895 SVLIYQCAWRIQVAKGKLRKLKMAARDTEALKVEKGKLEEHIEELSSRLCLEKKLRSDLE 954
Query: 625 NKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD- 449
N + I K++ + R + ++ +E + ++ ++ L K++++
Sbjct: 955 NSKATEISKLQTTLHEMERRVEEARATQERESAKKVVEEALVLER--EKIALLTKEVEEL 1012
Query: 448 DIEVLSKNADKQSTKE-ITTKEEKN--RKNRESVNDEGYRTTGCPKISLIDYPDETLGTL 278
+ +L + +K +T + +E+N + V +E ++ K +L + + T G
Sbjct: 1013 KVLLLKEQEEKNATNSAFSIAQERNDDLTKKVEVANENFKQL---KDTLKSFEESTKGLE 1069
Query: 277 KADAMDLNENPNNAIEDGKINQ 212
+ M+ +N N E G+ Q
Sbjct: 1070 TSLMMERQQNEANRREVGEAQQ 1091
>03_06_0777 +
36181095-36181311,36181444-36181530,36181785-36182725,
36182956-36183006,36183240-36183328,36184975-36185078,
36185179-36185278,36185396-36185471,36185556-36185670,
36185755-36186286,36187032-36187527
Length = 935
Score = 34.3 bits (75), Expect = 0.12
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = -3
Query: 574 FGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQL-KDDIEVLSKNADKQSTKEI 398
+G + T VE T+ +I +N +HL E T L D ++ + +D ++ +
Sbjct: 232 YGVGPSEGTPYVEDTLNCEITLPEN--QHLGETLTSDTMLGSGDASLIQEISDTAASSD- 288
Query: 397 TTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKI 218
K++ +N E G + P + + D+ L D P N +E
Sbjct: 289 -AKDKDTEQNPELHRKNGISPSRMPDYTEYGHADQLLSFGSNDVSTEANKPGNGVETLAS 347
Query: 217 NQDNKSDASEMRNKKLGSLVNEQNF 143
NQ+ +D E +N S +++F
Sbjct: 348 NQNEGADELENQNSLYESTTPDKSF 372
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 33.5 bits (73), Expect = 0.20
Identities = 43/198 (21%), Positives = 88/198 (44%), Gaps = 10/198 (5%)
Frame = -3
Query: 739 KIRPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQ-EFGEC 563
KI + T+++ R + T+ + D++ ++ N+ + S E+V + + +FGE
Sbjct: 30 KIAENQETSQKNRRRLAESTRDFKKASSDDKL--SLFNSLLKSYQEEVDNLTKRAKFGEN 87
Query: 562 ANT---RTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITT 392
A + L + S D+ L+ELET +++K ++E A ++ T
Sbjct: 88 AFLNIYQKLYEAPDPYPALASMAEQDQKLSELETENRKMKLELEEYRAEAAHLKNQQATI 147
Query: 391 K--EEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIED--- 227
+ EE+NR+ + + ++ + SL + +TL LK L + A E
Sbjct: 148 RRLEERNRQLEQQMEEKVREMVEMKQRSLAEDSQKTLEALKDRERALQDQLRQATESVKN 207
Query: 226 -GKINQDNKSDASEMRNK 176
K+++ +S E+R +
Sbjct: 208 MQKLHESAQSQLFELRTQ 225
>12_01_0811 -
7440413-7440712,7441285-7441398,7441448-7441705,
7441825-7441998,7442344-7442514,7442607-7442874,
7443171-7443937,7444437-7445123
Length = 912
Score = 32.3 bits (70), Expect = 0.47
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -3
Query: 637 TVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQ---QIESSKNFDKHLNELETL 467
+VIN K+DS E+V++ Q+ +TRT + + Q +I +++N D + ELE
Sbjct: 348 SVINKKVDSQKEEVKEVDSQDIAVSNDTRTDTYDGAQAQVPIRISNNRN-DTKVRELELR 406
Query: 466 IKQLKDDI 443
++ L+ ++
Sbjct: 407 VELLEAEL 414
>03_01_0049 +
418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 32.3 bits (70), Expect = 0.47
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 8/150 (5%)
Frame = -3
Query: 631 INNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLK 452
I N + IE+++ + CQ E + L S + I SSK + +LE + +
Sbjct: 554 IPNDSNLQIEELKSQICQLEEELRSKELLHTGSFADASISSSKVLQEKCADLELKLLNFR 613
Query: 451 DDI----EVLSKNADKQSTKEITTKEEKNR-KNRESVNDEGYRTTGCPKISL---IDYPD 296
I E K+ ++ + + E + + + S+ EG +T+G +D
Sbjct: 614 SQIYELEEKFQKSQEELEQRNLELSELRQKLDSSHSMAGEGVQTSGARGYQFRNGMDSEP 673
Query: 295 ETLGTLKADAMDLNENPNNAIEDGKINQDN 206
ET LKA + L + N+ + K+ ++
Sbjct: 674 ET-DVLKA-KIQLQQQENDDLRCSKVEMES 701
>10_08_0558 + 18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 31.9 bits (69), Expect = 0.62
Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 7/166 (4%)
Frame = -3
Query: 607 IEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDD------ 446
+E++ K ++ G + V+ + SK D+ + EL++ + ++
Sbjct: 701 LEELLQKAQEDLGSIQEQHRVKVQQLLTLVDFKSKETDRLVMELKSKSDEFQNQKRCNEA 760
Query: 445 -IEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKAD 269
+ VLS+ D+ K E++ E+ + C K + D + L +
Sbjct: 761 KLSVLSEEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQKDMFLQDRDAEIALLNKE 820
Query: 268 AMDLNENPNNAIEDGKINQDNKSDASEMRNKKLGSLVNEQNFELYD 131
+ + +E+ + +K++ EM +KL S + FE YD
Sbjct: 821 LASIKDQVQTYLEEINTLKSSKNEKEEM-IEKLQSEIRSLKFE-YD 864
>05_06_0123 +
25817172-25817470,25818983-25819133,25819217-25819399,
25819740-25819814,25819985-25820140,25820275-25820373,
25820457-25820587,25821077-25821158,25821251-25821598
Length = 507
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = -3
Query: 151 QNFELYDKWAGIFKQATD*FICSFWFAFKLTDHFTLTDYNRAIAYNSITP 2
+N KW G+ ++ + I + W +FK +D L+++++A+ + S+ P
Sbjct: 270 ENANAIPKWTGLLPRSGNMVINTEWGSFK-SDKLPLSEFDKAMDFESLNP 318
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Frame = -3
Query: 724 RRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQ-EFGECANTRT 548
R +A+ E R ++ LR + +R+ ++++ + + + C + AN +
Sbjct: 220 RMSAKVAELERETSESSSSLRRSKERV------SELEQRVSYMEKELCSTKDAAAANEQR 273
Query: 547 LSVE-STV----EQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEE 383
L+ E STV E ESS+ + K ELE +IK L+ + + ++ KE + K +
Sbjct: 274 LAAELSTVMKLAELHKESSEEWSKKAGELEGVIKALETHLTQVEDEYKEKLEKETSAKRD 333
>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
22709162-22709206,22709367-22709445,22709522-22709595,
22709703-22709809,22711116-22711301,22711882-22711920,
22712020-22712086,22712207-22712281,22713113-22713347,
22713425-22713755,22714530-22714710,22714810-22714950,
22715041-22715302,22715503-22715892,22717179-22717735,
22718421-22718557,22718672-22718853,22718959-22719339,
22719420-22719545,22719635-22719700,22720056-22721839,
22721914-22722193,22722386-22722616,22723067-22723588,
22723683-22723815,22723937-22724193
Length = 2405
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -3
Query: 634 VINNKIDSMIEKVRDKFCQEFGECANTRTL-SVESTVEQQIESSKNFDKHLNELETLIKQ 458
VI++ + + + VRDK C G SV ++Q+ ES K +K + ++ +
Sbjct: 2318 VISDDVKQLADSVRDKLCDLIGTEKFVEVYNSVRKGLKQKRESRKQSEKLIAAVDP-ARH 2376
Query: 457 LKDDIEVLSKNADKQSTKEITTK 389
K + + +K+ + + K +T K
Sbjct: 2377 AKRKLRIAAKHREHKRRKIMTMK 2399
>09_04_0539 - 18416184-18416830,18417983-18419057
Length = 573
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = -3
Query: 670 VLRVTMDRILKTVINNKIDSMIEKVRDKFCQE----FGECANTRTLSVESTVEQQIESSK 503
V + M R + I N+I IE +R++ C+ E + + + + E+ E K
Sbjct: 343 VQSIAMLRSAEEAIENEIQKFIE-MRNETCENSANNHSETEWSSSCHFDESTEELSEKLK 401
Query: 502 NFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEE 383
+ LNE TLI +I L KQ + + E
Sbjct: 402 LLESRLNEASTLINDKDSEILELDVLNHKQPKQHVLCNTE 441
>04_01_0616 -
8069107-8069217,8070127-8070499,8070514-8070751,
8070881-8071189,8071225-8071363
Length = 389
Score = 29.9 bits (64), Expect = 2.5
Identities = 35/126 (27%), Positives = 53/126 (42%)
Frame = -3
Query: 517 IESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYR 338
I ++N K +N E L QL D+ + + DK+ TK+ K + E ++G+
Sbjct: 147 ILQTRNDSKPINGTEMLAAQL--DLLMKRMDNDKKDTKQGAVKALNSYMTCEVCGNDGHS 204
Query: 337 TTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNKSDASEMRNKKLGSLV 158
T PK + D M +N N NN +GK ++ S M K G
Sbjct: 205 GTDRPKT-------------RKDVMFMNNNNNNNNNNGKPRMEHCS----MGRIKYGP-- 245
Query: 157 NEQNFE 140
N QNF+
Sbjct: 246 NPQNFK 251
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -3
Query: 667 LRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKH 488
L MDR +K S++EKV+ K +F A+ + +++ E +N +K
Sbjct: 155 LDADMDRFIKAQSERLRQSILEKVQAK---QFEALASVEDKILRKIRDKEAEV-ENINKR 210
Query: 487 LNELETLIKQLKDDIEVLSKNA 422
+ELE IKQL ++ + A
Sbjct: 211 NSELEDQIKQLAVEVGAWQQRA 232
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 2.5
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Frame = -3
Query: 541 VESTVEQQ-IESSKNFDKHLNELETLIKQLKDDIEVLSK-NADKQSTKEITTKEEKNRKN 368
+E E+Q +++ N H L T K+ + + +AD + + E +N
Sbjct: 2170 IEDAEEKQGMQNEDNVVHHDESLVTTQKEEASQVHTDEQYSADTKMDDTAISYAEMTHEN 2229
Query: 367 RESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGK-INQDNKSDAS 191
+ E T K D+P+ + T K D +D + + ++ +ED K +N S S
Sbjct: 2230 TSTEPREVEDTK--EKKGFNDFPEFVVETSKQDDVDQDFSIHHQVEDEKSAETENNSAES 2287
Query: 190 EMRNKKLGSLVNEQN 146
E KL + E N
Sbjct: 2288 EAVQPKLDITIAETN 2302
Score = 29.9 bits (64), Expect = 2.5
Identities = 27/107 (25%), Positives = 45/107 (42%)
Frame = -3
Query: 703 ENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVE 524
ENR K + T+ + D + N+ DS V+ C E E + + V ST E
Sbjct: 2689 ENRHGAKDEQTLSLIEPDTGNAEKLPNEADS----VQSPPCTEQEESIESSYVEVRSTTE 2744
Query: 523 QQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEE 383
Q+ES ++ T ++ IE L + K++ E + E+
Sbjct: 2745 GQVESEVIETNEEDQHTTAGGHTEEQIENLHDDKSKETCSEEISDEQ 2791
>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = -3
Query: 667 LRVTMDRILKT--VINNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFD 494
L T+D + K V+ K + +E+ ++ F + + A ++L + EQQIE NF
Sbjct: 788 LNETLDMLEKKEKVLEKKAAAELERAKE-FSKAKNKRAAIQSLKRKKLYEQQIEQLGNFQ 846
Query: 493 KHLNELETLIKQLK---DDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDE 347
+++ +++ K + ++ L A + T + K + +N++
Sbjct: 847 LRIHDQMIMLEAAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQ 898
>12_02_0668 +
21688853-21688933,21689043-21689081,21689597-21689794,
21690288-21690341,21690772-21690825,21691544-21691597,
21691694-21691765,21691860-21691949,21692132-21692188,
21692449-21692514
Length = 254
Score = 29.1 bits (62), Expect = 4.4
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Frame = -3
Query: 547 LSVESTVEQQIESSKNFDKHLNE-LETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRK 371
L+ S+++ Q+ K+ + L + I+QL+ D + L KQ +E + KN
Sbjct: 127 LNWRSSLDTQVTKYKSELSDIKTALNSEIEQLRSDFQELRTTLKKQ--QEDVSNSLKNLG 184
Query: 370 NRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPNNAIEDGKINQDNKSDAS 191
+++ +++G + +G S + +TLG LK D D N D SDA+
Sbjct: 185 LQDATDNDGNKGSGEENAS--EGVSDTLGNLKLD-------------DTPKNHDESSDAN 229
Query: 190 EMRNKKL 170
+ +N+ +
Sbjct: 230 DEKNETI 236
>08_01_0205 -
1642769-1642783,1642923-1643555,1643656-1643737,
1644474-1644514
Length = 256
Score = 29.1 bits (62), Expect = 4.4
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Frame = -3
Query: 760 PFTSTSTKIRPLRRTAEETENR-RVQKT--KATVLRVTMDRI--LKTVINNKIDSMIEKV 596
P +S+++ L+R N R +K+ K V+ + R LK I ID+ E
Sbjct: 10 PIKISSSRLASLQRLPHHFLNSLRTKKSLAKKDVMGINKWRFEKLKEHIQGDIDAENEAY 69
Query: 595 RDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADK 416
+++ Q G T L+ ++ E + E++ + ++ +ETL+ + K ++ S NAD
Sbjct: 70 -ERYTQNVGLLEETFGLTEDAADEPEPEATSSEER----METLVSEAKVRLKSDSANADG 124
Query: 415 QSTKEITTKEEKNRKNRES 359
+ T ++K ++ ES
Sbjct: 125 FRDRIATILDQKIKELLES 143
>03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = -3
Query: 607 IEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSK 428
+EK ++ + + +L+ E+ ++ ES K+ + ELE IK L+ IEVL+
Sbjct: 817 LEKSLEELTSKLVASEKSNSLA-ETQLKCMAESYKSLESRKAELENEIKVLQSKIEVLTA 875
Query: 427 NAD--KQSTKEITTKEEKNRKNRESVNDE 347
D +Q+ +E T+ + E +E
Sbjct: 876 ELDDERQNHQEDITRYRDLEEKIERYENE 904
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = -3
Query: 628 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 449
+N++ S++E RD +E + +EST ++ ++ K ELE L+KQL+
Sbjct: 592 SNELASIVE-ARDNLKKELLDVFK----KLESTSQELVDERKTVTTLNRELEALVKQLQM 646
Query: 448 DIEVLSKNADKQSTKEITTKEEKNRKNRESVNDE 347
D E ++ A + E T ++ ++ S++ E
Sbjct: 647 DSE--ARKALEADLDEATKSLDEMNRSALSLSKE 678
>12_01_0798 +
7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 28.7 bits (61), Expect = 5.8
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Frame = -3
Query: 718 TAEETENR---RVQKTKATVLRVTMDRILKTVINNKIDSMIEK----VRDKFCQEFGECA 560
T EE ++ +Q R MD+I+ ++I+ ++ EK +R +E + A
Sbjct: 402 TFEEVDSNSMPNLQNVSRNNQRSEMDKIIWSLISFSKITVPEKYSILIRGNRYKEALDFA 461
Query: 559 NTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTK 389
L + ++ Q SS D +++++T + +KD + VLS+ +K EI K
Sbjct: 462 CKHNLDKDEVLKAQWLSS---DGDVHDIDTYLANIKDQVFVLSECLNKVGPTEIALK 515
>05_06_0020 +
24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/82 (20%), Positives = 40/82 (48%)
Frame = -3
Query: 421 DKQSTKEITTKEEKNRKNRESVNDEGYRTTGCPKISLIDYPDETLGTLKADAMDLNENPN 242
DK++ K+ +++ NRK ++ DE + ++ D++ G A ++
Sbjct: 448 DKRAKKKQAKQKKNNRKIKDKERDEKFEAKILERLHDETAIDDSDGLSSKQAEEVTTKVE 507
Query: 241 NAIEDGKINQDNKSDASEMRNK 176
N +E+G ++ D+SE+ ++
Sbjct: 508 N-LEEGASDRQGDLDSSEIAHR 528
>12_01_0943 - 9324181-9325095,9326671-9326853
Length = 365
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 619 IDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIES 509
++S EK+RD+FC F L VE +QIE+
Sbjct: 155 VNSSWEKLRDRFCLAFFPVTRITALQVEILSFKQIEN 191
>08_01_0077 +
546473-546512,546739-547013,547772-547885,548002-550245
Length = 890
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = -3
Query: 511 SSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRESVNDEGYRTT 332
SS + L+ +E +++L DD+ S + + +T +I + N +NR + + G
Sbjct: 541 SSMDTRSDLSAIENQVRKLVDDLRSDSVDVQRSATSDIRLLAKHNMENRIIIANCGAINL 600
Query: 331 GCPKISLIDYPD-ETLGTLKADAMDLNENPNNAI 233
+ L+ PD +T ++L+ N NN I
Sbjct: 601 ---LVGLLHSPDSKTQEHAVTALLNLSINDNNKI 631
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 514 ESSKNFDKHLNELETLIKQLKDDIEVLSKNADKQSTKEITTKEEKNRKNRES 359
ESS N D+H E + L+ K+ E++ K K + T +K R+ ES
Sbjct: 39 ESSDNHDQHFEENDPLLHLTKE--ELMKKLKIKLGKRPFTHDHKKKRQKVES 88
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Frame = -3
Query: 496 DKHLNELETLIKQL----KDDIEVLSKNADKQSTKEI------TTKEEKNRKNRESVNDE 347
+K L+ LE L++QL +++ + + S +EI T+ + K + N+E
Sbjct: 306 EKQLSYLEELMEQLDGAEEEEATAILGRSGYLSQQEIKSAILKATQSLRKAKGESNGNEE 365
Query: 346 GYRTTGCPKISLIDYPDETL 287
+G K L+ PDETL
Sbjct: 366 KADASGVDKYPLVSVPDETL 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,917,605
Number of Sequences: 37544
Number of extensions: 294054
Number of successful extensions: 1172
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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