Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte10i12
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1... 35 0.40
BC141862-1|AAI41863.1| 975|Homo sapiens discs, large (Drosophil... 34 0.53
AF119818-1|AAF34345.1| 1019|Homo sapiens discs, large (Drosophil... 34 0.53
AF119817-1|AAF34344.1| 975|Homo sapiens discs, large (Drosophil... 34 0.53
BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein. 33 1.2
AB020720-1|BAA74936.1| 1301|Homo sapiens KIAA0913 protein protein. 33 1.2
AL590103-7|CAI12130.1| 93|Homo sapiens heparan sulfate proteog... 32 2.1
AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel, nonvol... 31 3.7
AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens ... 31 3.7
AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate cotr... 31 3.7
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 3.7
X60992-1|CAA43306.1| 468|Homo sapiens T cell glycoprotein CD6 p... 31 4.9
U66146-1|AAC51165.1| 592|Homo sapiens CD6e protein. 31 4.9
U66145-1|AAC51164.1| 601|Homo sapiens CD6d protein. 31 4.9
U66144-1|AAC51163.1| 595|Homo sapiens CD6c protein. 31 4.9
U66143-1|AAC51162.1| 635|Homo sapiens CD6b protein. 31 4.9
U66142-1|AAC51161.1| 668|Homo sapiens CD6a protein. 31 4.9
U34625-1|AAA86419.1| 595|Homo sapiens T cell surface glycoprote... 31 4.9
U34624-1|AAA86418.1| 636|Homo sapiens T cell surface glycoprote... 31 4.9
U34623-1|AAA86417.1| 668|Homo sapiens T cell surface glycoprote... 31 4.9
L78838-5|AAL40087.1| 595|Homo sapiens T cell surface glycoprote... 31 4.9
L78838-4|AAL40086.1| 601|Homo sapiens T cell surface glycoprote... 31 4.9
L78838-3|AAL40088.1| 635|Homo sapiens T cell surface glycoprote... 31 4.9
L78838-2|AAL40085.1| 592|Homo sapiens T cell surface glycoprote... 31 4.9
L78838-1|AAL40089.1| 668|Homo sapiens T cell surface glycoprote... 31 4.9
BC113365-1|AAI13366.1| 299|Homo sapiens solute carrier family 2... 31 4.9
BC101521-1|AAI01522.1| 299|Homo sapiens solute carrier family 2... 31 4.9
BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein. 31 4.9
AK131105-1|BAC85155.1| 638|Homo sapiens FLJ00362 protein protein. 31 4.9
AJ278148-1|CAC27562.1| 299|Homo sapiens oxodicarboxylate carrie... 31 4.9
U58837-1|AAB63387.1| 1251|Homo sapiens cGMP-gated cation channel... 31 6.5
L15297-1|AAA65619.1| 623|Homo sapiens cyclic nucleotide-gated c... 31 6.5
L15296-1|AAA65620.1| 909|Homo sapiens cyclic nucleotide-gated c... 31 6.5
BC078669-1|AAH78669.1| 668|Homo sapiens CD6 molecule protein. 31 6.5
AF073310-1|AAD21531.1| 1338|Homo sapiens insulin receptor substr... 31 6.5
AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor CNG-c... 31 6.5
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 30 8.6
BC033755-1|AAH33755.1| 639|Homo sapiens CD6 protein protein. 30 8.6
BC018784-1|AAH18784.1| 112|Homo sapiens Unknown (protein for IM... 30 8.6
>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
protein.
Length = 3530
Score = 34.7 bits (76), Expect = 0.40
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 314 GSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAGSDPRAKCETTSAVPPL 150
G+GP A+P+ L P + P P PR K +A + +A ETTS P L
Sbjct: 2504 GTGPPAKPVLLRATPKPLAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558
>BC141862-1|AAI41863.1| 975|Homo sapiens discs, large (Drosophila)
homolog-associated protein 2 protein.
Length = 975
Score = 34.3 bits (75), Expect = 0.53
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 595 RLQPPSFPGGSCGISPPEYCGHRQSG 672
R QPP G +CG++PPE C H G
Sbjct: 8 RTQPPLCSGHTCGLAPPEDCEHLHHG 33
>AF119818-1|AAF34345.1| 1019|Homo sapiens discs, large (Drosophila)
homolog-associated protein 2 protein.
Length = 1019
Score = 34.3 bits (75), Expect = 0.53
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 595 RLQPPSFPGGSCGISPPEYCGHRQSG 672
R QPP G +CG++PPE C H G
Sbjct: 52 RTQPPLCSGHTCGLAPPEDCEHLHHG 77
>AF119817-1|AAF34344.1| 975|Homo sapiens discs, large (Drosophila)
homolog-associated protein 2 protein.
Length = 975
Score = 34.3 bits (75), Expect = 0.53
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 595 RLQPPSFPGGSCGISPPEYCGHRQSG 672
R QPP G +CG++PPE C H G
Sbjct: 8 RTQPPLCSGHTCGLAPPEDCEHLHHG 33
>BC151206-1|AAI51207.1| 1837|Homo sapiens KIAA0913 protein protein.
Length = 1837
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = -1
Query: 359 PGAKFEGLQRAADDSGSGPCAQPMRLPGDPC--RVGP---KPRMTTPRTMSKQGSAGAGS 195
PG K +GL S GP GD ++GP K + +GSAG GS
Sbjct: 545 PGTKRKGLGEGVPSSQRGPRRLSAE-GGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGS 603
Query: 194 DPRAKCETTSAVPPLGKSEYQDGVSKLGA 108
R E +S P L + D LGA
Sbjct: 604 KRRLSSEDSSLEPDLAEMSLDDSSLALGA 632
>AB020720-1|BAA74936.1| 1301|Homo sapiens KIAA0913 protein protein.
Length = 1301
Score = 33.1 bits (72), Expect = 1.2
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = -1
Query: 359 PGAKFEGLQRAADDSGSGPCAQPMRLPGDPC--RVGP---KPRMTTPRTMSKQGSAGAGS 195
PG K +GL S GP GD ++GP K + +GSAG GS
Sbjct: 267 PGTKRKGLGEGVPSSQRGPRRLSAE-GGDKALHKMGPGGGKAKALGGAGSGSKGSAGGGS 325
Query: 194 DPRAKCETTSAVPPLGKSEYQDGVSKLGA 108
R E +S P L + D LGA
Sbjct: 326 KRRLSSEDSSLEPDLAEMSLDDSSLALGA 354
>AL590103-7|CAI12130.1| 93|Homo sapiens heparan sulfate
proteoglycan 2 protein.
Length = 93
Score = 32.3 bits (70), Expect = 2.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = -2
Query: 469 TQCCTASSRTKRLQSSSKGSTEI---ETRPLTG*ITAKQD--PELNSRVCSEQPMTVGRA 305
T CCT S + R Q+++ + + RPL + + PEL V P T+G
Sbjct: 24 TSCCTLSVQPLRTQAATAAGSPTRWAQPRPLPSCSSKNPELGPELPRDVYMPGPWTLGEG 83
Query: 304 PARSPCGF 281
P + P G+
Sbjct: 84 PGQCPAGY 91
>AL162741-19|CAI23261.1| 704|Homo sapiens sodium channel,
nonvoltage-gated 1, delta protein.
Length = 704
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 281 PGDPCRV-GPKPRMTTPRTMSKQGSAGAGSDPRAKCETTSAVPPLGKSEYQDGVSKLGA 108
P PC + G + R T KQG A A + PR SA PP K +Q+G+ +L A
Sbjct: 64 PQRPCHLKGWQHRPTQHNAACKQGQAAAQTPPRP--GPPSAPPPPPKEGHQEGLVELPA 120
>AK093239-1|BAC04105.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ35920 fis, clone TESTI2010591, highly similar to
AMILORIDE-SENSITIVE SODIUM CHANNEL DELTA-SUBUNIT. ).
Length = 704
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 281 PGDPCRV-GPKPRMTTPRTMSKQGSAGAGSDPRAKCETTSAVPPLGKSEYQDGVSKLGA 108
P PC + G + R T KQG A A + PR SA PP K +Q+G+ +L A
Sbjct: 64 PQRPCHLKGWQHRPTQHNAACKQGQAAAQTPPRP--GPPSAPPPPPKEGHQEGLVELPA 120
>AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate
cotransporter 3 protein.
Length = 1214
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -3
Query: 579 SSPRSKTVSRASRCES*NSNISLRSA-QCIFR*ASIEIPNAVQHPPERSVSRAQAKDRQR 403
S P S ++SR + S +S S R A + + AS +IP V HPPE + A + Q+
Sbjct: 309 SPPSSPSISRLT---SRSSQKSQRQAPELLVSPASDDIPTVVIHPPEEDLEAALKGEEQK 365
Query: 402 SKQD 391
++++
Sbjct: 366 NEEN 369
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 188 SDRYQPQRCPAWTWSSEW---SCAAWVRRGKGPQEAAWAARRGPTHCHRLLAAD 340
S R++ RCP+ + SSE SC + RG+ P+E + RR C + L D
Sbjct: 277 SHRHRHHRCPSRSQSSESRPSSCESR-HRGRSPEEGQKSRRRHSRRCSKTLCKD 329
>X60992-1|CAA43306.1| 468|Homo sapiens T cell glycoprotein CD6
protein.
Length = 468
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U66146-1|AAC51165.1| 592|Homo sapiens CD6e protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U66145-1|AAC51164.1| 601|Homo sapiens CD6d protein.
Length = 601
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U66144-1|AAC51163.1| 595|Homo sapiens CD6c protein.
Length = 595
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U66143-1|AAC51162.1| 635|Homo sapiens CD6b protein.
Length = 635
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U66142-1|AAC51161.1| 668|Homo sapiens CD6a protein.
Length = 668
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U34625-1|AAA86419.1| 595|Homo sapiens T cell surface glycoprotein
CD6 protein.
Length = 595
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U34624-1|AAA86418.1| 636|Homo sapiens T cell surface glycoprotein
CD6 protein.
Length = 636
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>U34623-1|AAA86417.1| 668|Homo sapiens T cell surface glycoprotein
CD6 protein.
Length = 668
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>L78838-5|AAL40087.1| 595|Homo sapiens T cell surface glycoprotein
CD6 isoform c protein.
Length = 595
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>L78838-4|AAL40086.1| 601|Homo sapiens T cell surface glycoprotein
CD6 isoform d protein.
Length = 601
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>L78838-3|AAL40088.1| 635|Homo sapiens T cell surface glycoprotein
CD6 isoform b protein.
Length = 635
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>L78838-2|AAL40085.1| 592|Homo sapiens T cell surface glycoprotein
CD6 isoform e protein.
Length = 592
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>L78838-1|AAL40089.1| 668|Homo sapiens T cell surface glycoprotein
CD6 isoform c protein.
Length = 668
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>BC113365-1|AAI13366.1| 299|Homo sapiens solute carrier family 25
(mitochondrial oxodicarboxylate carrier), member 21
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 366 FAVIYPVSGLVSISVDPLLELWRRF 440
F Y V ++ ++ DP+LE WR+F
Sbjct: 187 FGFYYNVKNMIPVNKDPILEFWRKF 211
>BC101521-1|AAI01522.1| 299|Homo sapiens solute carrier family 25
(mitochondrial oxodicarboxylate carrier), member 21
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 366 FAVIYPVSGLVSISVDPLLELWRRF 440
F Y V ++ ++ DP+LE WR+F
Sbjct: 187 FGFYYNVKNMIPVNKDPILEFWRKF 211
>BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein.
Length = 137
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 152 KAVRLMWFRI*PSDRYQPQR----CPA---WTWSSEWSCAAWVRRGKGPQEAAWAAR 301
+A R +W R+ S P+ C A W+S W C RR G +AWA+R
Sbjct: 5 RAHRCVWTRVAASRTGAPRSTTASCSASGRCAWASVWRCECCGRRAAGAAASAWASR 61
>AK131105-1|BAC85155.1| 638|Homo sapiens FLJ00362 protein protein.
Length = 638
Score = 31.1 bits (67), Expect = 4.9
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = -1
Query: 683 HTRPPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPK-LYPVRVAASPETPTS--- 516
H P C P + P G EGG R + P L+ + +YP+ + S + P S
Sbjct: 96 HPEAPPCALPSWEPQPHPLWGRGLEGGGERRAMQDPWLEAEPIYPLPIHCS-QFPASLSL 154
Query: 515 ---RYDQPNAFL 489
R QP++FL
Sbjct: 155 CDLRRAQPHSFL 166
>AJ278148-1|CAC27562.1| 299|Homo sapiens oxodicarboxylate carrier
protein.
Length = 299
Score = 31.1 bits (67), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 366 FAVIYPVSGLVSISVDPLLELWRRF 440
F Y V ++ ++ DP+LE WR+F
Sbjct: 187 FGFYYNVKNMIPVNKDPILEFWRKF 211
>U58837-1|AAB63387.1| 1251|Homo sapiens cGMP-gated cation channel beta
subunit protein.
Length = 1251
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 680 TRPPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPKLYPVRVAASP 531
T PP R P G P PP G E GP +P+ + VR+ SP
Sbjct: 1181 TDPPAPRTPPEPPGSPPSSPPPASLGSCEGEEEGP-AEPEEHSVRICMSP 1229
>L15297-1|AAA65619.1| 623|Homo sapiens cyclic nucleotide-gated
cation channel protein.
Length = 623
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 680 TRPPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPKLYPVRVAASP 531
T PP R P G P PP G E GP +P+ + VR+ SP
Sbjct: 553 TDPPAPRTPPEPPGSPPSSPPPASLGSCEGEEEGP-AEPEEHSVRICMSP 601
>L15296-1|AAA65620.1| 909|Homo sapiens cyclic nucleotide-gated
cation channel protein.
Length = 909
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 680 TRPPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPKLYPVRVAASP 531
T PP R P G P PP G E GP +P+ + VR+ SP
Sbjct: 839 TDPPAPRTPPEPPGSPPSSPPPASLGSCEGEEEGP-AEPEEHSVRICMSP 887
>BC078669-1|AAH78669.1| 668|Homo sapiens CD6 molecule protein.
Length = 668
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G+VC
Sbjct: 200 RQLGCGWAVQALPGLHFMPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGVVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>AF073310-1|AAD21531.1| 1338|Homo sapiens insulin receptor
substrate-2 protein.
Length = 1338
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -1
Query: 374 YCETGPGAKFEGLQRAADDSGSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAGS 195
Y PGA F G SGSG C +P P V ++ PR + +A +
Sbjct: 654 YMPMTPGAAFAG-------SGSGSCRSDDYMPMSPASVSAPKQILQPRAAAAAAAAVPSA 706
Query: 194 DPRAKCETTSA 162
P T++A
Sbjct: 707 GPAGPAPTSAA 717
>AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor
CNG-channel beta subunit protein.
Length = 1245
Score = 30.7 bits (66), Expect = 6.5
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 680 TRPPDCRCPQYSGGEMPQLPPGKEGGWSRNEIMGPLLDPKLYPVRVAASP 531
T PP R P G P PP G E GP +P+ + VR+ SP
Sbjct: 1175 TDPPAPRTPPEPPGSPPSSPPPASLGRPEGEEEGP-AEPEEHSVRICMSP 1223
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 30.3 bits (65), Expect = 8.6
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 359 PGAKFE-GLQRAADDSGSGPCAQPMRLPGDPCRVGPKPRMTTPRTMSKQGSAGAGSDPRA 183
PG K E GL G GP +P + G P GP + P + G G+ +
Sbjct: 388 PGQKGEIGLLGPLGHDGKGPRGKPGDM-GPPGPQGPPGKDGPPGVKGENGQPGSPGEKGE 446
Query: 182 KCETTSAVPPLGKSE 138
K ET A P K E
Sbjct: 447 KGETGQAGSPGEKGE 461
>BC033755-1|AAH33755.1| 639|Homo sapiens CD6 protein protein.
Length = 639
Score = 30.3 bits (65), Expect = 8.6
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 RDVGVSGLAATRTGYSFGSRRGPIISFRLQ---PPSFPGGSCGISPPEYCGHRQSGGLVC 684
R +G G F RGPI ++ ++ G+ YCGH++ G VC
Sbjct: 200 RQLGCGWAVQALPGLHFTPGRGPIHRDQVNCSGAEAYLWDCPGLPGQHYCGHKEDAGAVC 259
Query: 685 CMH-AW 699
H +W
Sbjct: 260 SEHQSW 265
>BC018784-1|AAH18784.1| 112|Homo sapiens Unknown (protein for
IMAGE:4873970) protein.
Length = 112
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 314 GSGPCAQPMRLPGDPCRVGPKPRMTTPRTMS 222
G PC +P+ G CR GP+P + R S
Sbjct: 3 GQRPCREPVLPAGAACRRGPRPHVNQARRRS 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,897,512
Number of Sequences: 237096
Number of extensions: 3620825
Number of successful extensions: 14335
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 11683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14283
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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